| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658463
Identifier: 88658463
GI number: 88658463
Start: 616875
End: 617564
Strand: Direct
Name: 88658463
Synonym: ECH_0611
Alternate gene names: NA
Gene position: 616875-617564 (Clockwise)
Preceding gene: 88658332
Following gene: 88658116
Centisome position: 52.44
GC content: 29.57
Gene sequence:
>690_bases ATGCAAAGTTTAGATATTAAAAAATTTGTTAATGGACATTTATGCAGAAAAGCAGATGCCCTCTCTTTTATTTATCAAAA ATGTTACTGTATAGGTCATACCCCAGAAGACAGTGATACATTAACAATACATCTTTCCAAAACCCATAAAAGCAAAAAAA AAGTGGTGCCATCTAAGAATTCCTTATTTGTATTAAATGTTGAATATCCTGTTGCGATGATGAAACAATTGCGACATATG AATTTTCTAACATTATCAAAAGATGAAATGGGAAAAAATGTTATAGATGCAAAACTTTATATTTTTGTCAAACAATGTAA TCTTAAAAAATTCATGAAAGAAGTATTAAATAACAATAAACCAGGATCTACTGTAACACCATCTGAATATGGTAGCGTTG TCTATACAGTATTATGTAATAATAAGCTTTTTGAAGATTTTAATGAACATAATGCTTTAAGCACAATTTCAAAGATGGCA TTAACAAATACACGAGAATTTCCTGCTTTTAAGTTTATACCTAAAGTTGGTATCGCCCGGAAATTACTACATGCTATAGG ATGTGTTTCACAAAATGATGAACCTTTAACCTCAACAACAATTGGCACTCAAGAAGAAGAATCAGTACCTACATTAGATT GTCTATCAACAGAACCAATTTATGAGCCTTTACAAACACATAATAAATAA
Upstream 100 bases:
>100_bases TTTATTAAGATATAATTTAATATTAAAAATTATTAAAAATATTTATTGTAATATAGTTAATTTTATTTATTATTTAAATA AAATAAATTAATTAAATATT
Downstream 100 bases:
>100_bases TATATCATACACATTTTATAATATATTAAATGTACATATACCATTCTTTAATTTTCCTTAAATAATAGTATTATTACAGA TTTATTATAAAATTTATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MQSLDIKKFVNGHLCRKADALSFIYQKCYCIGHTPEDSDTLTIHLSKTHKSKKKVVPSKNSLFVLNVEYPVAMMKQLRHM NFLTLSKDEMGKNVIDAKLYIFVKQCNLKKFMKEVLNNNKPGSTVTPSEYGSVVYTVLCNNKLFEDFNEHNALSTISKMA LTNTREFPAFKFIPKVGIARKLLHAIGCVSQNDEPLTSTTIGTQEEESVPTLDCLSTEPIYEPLQTHNK
Sequences:
>Translated_229_residues MQSLDIKKFVNGHLCRKADALSFIYQKCYCIGHTPEDSDTLTIHLSKTHKSKKKVVPSKNSLFVLNVEYPVAMMKQLRHM NFLTLSKDEMGKNVIDAKLYIFVKQCNLKKFMKEVLNNNKPGSTVTPSEYGSVVYTVLCNNKLFEDFNEHNALSTISKMA LTNTREFPAFKFIPKVGIARKLLHAIGCVSQNDEPLTSTTIGTQEEESVPTLDCLSTEPIYEPLQTHNK >Mature_229_residues MQSLDIKKFVNGHLCRKADALSFIYQKCYCIGHTPEDSDTLTIHLSKTHKSKKKVVPSKNSLFVLNVEYPVAMMKQLRHM NFLTLSKDEMGKNVIDAKLYIFVKQCNLKKFMKEVLNNNKPGSTVTPSEYGSVVYTVLCNNKLFEDFNEHNALSTISKMA LTNTREFPAFKFIPKVGIARKLLHAIGCVSQNDEPLTSTTIGTQEEESVPTLDCLSTEPIYEPLQTHNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25923; Mature: 25923
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSLDIKKFVNGHLCRKADALSFIYQKCYCIGHTPEDSDTLTIHLSKTHKSKKKVVPSKN CCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHCCCCCCC SLFVLNVEYPVAMMKQLRHMNFLTLSKDEMGKNVIDAKLYIFVKQCNLKKFMKEVLNNNK CEEEEEECCCHHHHHHHHHCCEEEECHHHHCCHHHHHEEEEEEECCCHHHHHHHHHCCCC PGSTVTPSEYGSVVYTVLCNNKLFEDFNEHNALSTISKMALTNTREFPAFKFIPKVGIAR CCCCCCCCHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH KLLHAIGCVSQNDEPLTSTTIGTQEEESVPTLDCLSTEPIYEPLQTHNK HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHCCC >Mature Secondary Structure MQSLDIKKFVNGHLCRKADALSFIYQKCYCIGHTPEDSDTLTIHLSKTHKSKKKVVPSKN CCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHCCCCCCC SLFVLNVEYPVAMMKQLRHMNFLTLSKDEMGKNVIDAKLYIFVKQCNLKKFMKEVLNNNK CEEEEEECCCHHHHHHHHHCCEEEECHHHHCCHHHHHEEEEEEECCCHHHHHHHHHCCCC PGSTVTPSEYGSVVYTVLCNNKLFEDFNEHNALSTISKMALTNTREFPAFKFIPKVGIAR CCCCCCCCHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH KLLHAIGCVSQNDEPLTSTTIGTQEEESVPTLDCLSTEPIYEPLQTHNK HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA