| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658116
Identifier: 88658116
GI number: 88658116
Start: 617759
End: 618385
Strand: Direct
Name: 88658116
Synonym: ECH_0612
Alternate gene names: NA
Gene position: 617759-618385 (Clockwise)
Preceding gene: 88658463
Following gene: 88657816
Centisome position: 52.52
GC content: 33.81
Gene sequence:
>627_bases ATGAATGTTACTGTACTAAATGGTTATTGTGTCGGTACTACACAACCAAATAATAAGTTGGAAGTATCTACTGAAGCTGA TGAAATAAACCCTATTGTACCTTCACAAGGAGGTCCATCTTTGTTTAAGCTCTTCGTTCAGATCCCAAAAGATTCCGTAT TAGGTGATCCAATACTCACGGAGAGTGTTGATTTCTCACAAGAAAATATTACCAAACTTACTGTTGAAGCAGAGGTATTT GCTATAGTACGTTCAAATGATACAAAACATTTTGTGCATATATTAGACAAAACCAATGAAGAAAAACGCAAACAAGATAA GAAAAAGAGTAAGAAATATAAAGCTCTGGATTTTGCATCTATTGCTAATTCCTGTAATCCTGTACTTGTAAAACCAAAAG CATATGCTAATCCAGAAGTCAAGTTTGACTTAAAATATGCATTGTTAACTACTGGTGGACTAAATTATGTAACATTCTCT CCAAGCACACCAAGAACAGAAGAAAGATTAAAAATATTATCAACATCAGCACCTTCAATATTACAACAACAACCTACATC AAGACTATCAGAAAGTGATGTAGAAGGATCAGCAGGCTGCTTTTCTTTCTTAAGATGTACACGTTAA
Upstream 100 bases:
>100_bases TATTATAAAAACGTGTTTTTTAACGGTAAATCATATGCTTAATTTTAGTGAAGAAGACCATCGACAGTACAACAATGTAT TATGCAGAAACCTGAAGTCT
Downstream 100 bases:
>100_bases ATTCCTAATAGGATGCTTTTTTTTAGATGTATACATTAAATTCCTAATAGGATGCTTTTTTCTTAGATGTGCACATTAAA TTCCTAATAGGATGCTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MNVTVLNGYCVGTTQPNNKLEVSTEADEINPIVPSQGGPSLFKLFVQIPKDSVLGDPILTESVDFSQENITKLTVEAEVF AIVRSNDTKHFVHILDKTNEEKRKQDKKKSKKYKALDFASIANSCNPVLVKPKAYANPEVKFDLKYALLTTGGLNYVTFS PSTPRTEERLKILSTSAPSILQQQPTSRLSESDVEGSAGCFSFLRCTR
Sequences:
>Translated_208_residues MNVTVLNGYCVGTTQPNNKLEVSTEADEINPIVPSQGGPSLFKLFVQIPKDSVLGDPILTESVDFSQENITKLTVEAEVF AIVRSNDTKHFVHILDKTNEEKRKQDKKKSKKYKALDFASIANSCNPVLVKPKAYANPEVKFDLKYALLTTGGLNYVTFS PSTPRTEERLKILSTSAPSILQQQPTSRLSESDVEGSAGCFSFLRCTR >Mature_208_residues MNVTVLNGYCVGTTQPNNKLEVSTEADEINPIVPSQGGPSLFKLFVQIPKDSVLGDPILTESVDFSQENITKLTVEAEVF AIVRSNDTKHFVHILDKTNEEKRKQDKKKSKKYKALDFASIANSCNPVLVKPKAYANPEVKFDLKYALLTTGGLNYVTFS PSTPRTEERLKILSTSAPSILQQQPTSRLSESDVEGSAGCFSFLRCTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22990; Mature: 22990
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVTVLNGYCVGTTQPNNKLEVSTEADEINPIVPSQGGPSLFKLFVQIPKDSVLGDPILT CEEEEEECEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC ESVDFSQENITKLTVEAEVFAIVRSNDTKHFVHILDKTNEEKRKQDKKKSKKYKALDFAS CCCCCCCCCEEEEEEEEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH IANSCNPVLVKPKAYANPEVKFDLKYALLTTGGLNYVTFSPSTPRTEERLKILSTSAPSI HHCCCCCEEECCCCCCCCCEEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHCCCCCHH LQQQPTSRLSESDVEGSAGCFSFLRCTR HHHCCHHHCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MNVTVLNGYCVGTTQPNNKLEVSTEADEINPIVPSQGGPSLFKLFVQIPKDSVLGDPILT CEEEEEECEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC ESVDFSQENITKLTVEAEVFAIVRSNDTKHFVHILDKTNEEKRKQDKKKSKKYKALDFAS CCCCCCCCCEEEEEEEEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH IANSCNPVLVKPKAYANPEVKFDLKYALLTTGGLNYVTFSPSTPRTEERLKILSTSAPSI HHCCCCCEEECCCCCCCCCEEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHCCCCCHH LQQQPTSRLSESDVEGSAGCFSFLRCTR HHHCCHHHCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA