| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658332
Identifier: 88658332
GI number: 88658332
Start: 614421
End: 615326
Strand: Direct
Name: 88658332
Synonym: ECH_0609
Alternate gene names: NA
Gene position: 614421-615326 (Clockwise)
Preceding gene: 88657572
Following gene: 88658463
Centisome position: 52.24
GC content: 33.0
Gene sequence:
>906_bases ATGTTAGCAAAATTACCAAAAGTGTCAAAAAGTAAATCACAGGAGCAAAATGAACCGTGGCAACAAAATGAAACACCGGA ACAAATAAAACAACGAGTCCAGAATATCATATCAAGTCCAGGTGTAGATAATGATGATGCAGAATTAATATGCAATATGA TAGATAAGAATCACGTACAAGATCTACTGTATTTACGTTATTATGTACAAAATTTAAAAAACGATCCAAGAATGAAATTA AAATCTATAAGGTGTGTGGGTAATACTAATTCTAACACTGGAGAACTTACCTTATATATTGGAGATAGGAAGAAAATACC AGTAATACCACATGGAACATCTATTTTTAGAGTAACTGTTAATATATTAAATAATGCACTTAACGACAACCCATTTCTTA AGGAACTTAATGTAATATCAAACAACAACGATTCTTCATGTTTTGATTTATATTGTCTTGTACTCGCAACAAACATGACC AATTTTAAATGTTCTACCCAAAGTAAAGGTAATAATGACTTTCTGGAGTTTAGTGAATTAATGCTTGTCCATCCACAGTC TGGAAAAGACGGTAAACATTTAACTCCACATTTCGAGGAGAAATATTTAGCAATGCTTGGATTTCATGTATGTTTAGAGC CTATTGTTCTTAAAACAGACGAACAAGAAGCATCTGAATGTGATGAAGGGGCTTCTCCTACTAAATCTCCTTATGCATCT AATGACAGCATTGCTTCTAGTTATAGTACATCTTCTTCTTTAGAAACAGTAGGTATGTCAGAGGAAGAAGATACAGATTT AAATCCATTAACTCCTTCACCACATGTCTTGGGACCATCACTTTATGAACCTATGTTCTTTCCAGATACACCAGGAACAC CTAAAACATCTAGAAGAAGTAAGTAA
Upstream 100 bases:
>100_bases TAAACTACAAATAATTGATACTAGTTGCAATACTTGCAATACTACTGACAATTAGTATATAATTACTAGTGTATTTTCAT GTGTTTAATGGTTATAAATT
Downstream 100 bases:
>100_bases ACCATACCAGTAATTACTTAACATAAAGTATAGAATATGTGTATTTAATAATACTATTTTACTCATCAATACTCTGTAAA TTTTACTATTATAAAAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MLAKLPKVSKSKSQEQNEPWQQNETPEQIKQRVQNIISSPGVDNDDAELICNMIDKNHVQDLLYLRYYVQNLKNDPRMKL KSIRCVGNTNSNTGELTLYIGDRKKIPVIPHGTSIFRVTVNILNNALNDNPFLKELNVISNNNDSSCFDLYCLVLATNMT NFKCSTQSKGNNDFLEFSELMLVHPQSGKDGKHLTPHFEEKYLAMLGFHVCLEPIVLKTDEQEASECDEGASPTKSPYAS NDSIASSYSTSSSLETVGMSEEEDTDLNPLTPSPHVLGPSLYEPMFFPDTPGTPKTSRRSK
Sequences:
>Translated_301_residues MLAKLPKVSKSKSQEQNEPWQQNETPEQIKQRVQNIISSPGVDNDDAELICNMIDKNHVQDLLYLRYYVQNLKNDPRMKL KSIRCVGNTNSNTGELTLYIGDRKKIPVIPHGTSIFRVTVNILNNALNDNPFLKELNVISNNNDSSCFDLYCLVLATNMT NFKCSTQSKGNNDFLEFSELMLVHPQSGKDGKHLTPHFEEKYLAMLGFHVCLEPIVLKTDEQEASECDEGASPTKSPYAS NDSIASSYSTSSSLETVGMSEEEDTDLNPLTPSPHVLGPSLYEPMFFPDTPGTPKTSRRSK >Mature_301_residues MLAKLPKVSKSKSQEQNEPWQQNETPEQIKQRVQNIISSPGVDNDDAELICNMIDKNHVQDLLYLRYYVQNLKNDPRMKL KSIRCVGNTNSNTGELTLYIGDRKKIPVIPHGTSIFRVTVNILNNALNDNPFLKELNVISNNNDSSCFDLYCLVLATNMT NFKCSTQSKGNNDFLEFSELMLVHPQSGKDGKHLTPHFEEKYLAMLGFHVCLEPIVLKTDEQEASECDEGASPTKSPYAS NDSIASSYSTSSSLETVGMSEEEDTDLNPLTPSPHVLGPSLYEPMFFPDTPGTPKTSRRSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33711; Mature: 33711
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAKLPKVSKSKSQEQNEPWQQNETPEQIKQRVQNIISSPGVDNDDAELICNMIDKNHVQ CCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH DLLYLRYYVQNLKNDPRMKLKSIRCVGNTNSNTGELTLYIGDRKKIPVIPHGTSIFRVTV HHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEHHH NILNNALNDNPFLKELNVISNNNDSSCFDLYCLVLATNMTNFKCSTQSKGNNDFLEFSEL HHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHEEE MLVHPQSGKDGKHLTPHFEEKYLAMLGFHVCLEPIVLKTDEQEASECDEGASPTKSPYAS EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCCCCCCCCCC NDSIASSYSTSSSLETVGMSEEEDTDLNPLTPSPHVLGPSLYEPMFFPDTPGTPKTSRRS CCCHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC K C >Mature Secondary Structure MLAKLPKVSKSKSQEQNEPWQQNETPEQIKQRVQNIISSPGVDNDDAELICNMIDKNHVQ CCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH DLLYLRYYVQNLKNDPRMKLKSIRCVGNTNSNTGELTLYIGDRKKIPVIPHGTSIFRVTV HHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEHHH NILNNALNDNPFLKELNVISNNNDSSCFDLYCLVLATNMTNFKCSTQSKGNNDFLEFSEL HHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHEEE MLVHPQSGKDGKHLTPHFEEKYLAMLGFHVCLEPIVLKTDEQEASECDEGASPTKSPYAS EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCCCCCCCCCC NDSIASSYSTSSSLETVGMSEEEDTDLNPLTPSPHVLGPSLYEPMFFPDTPGTPKTSRRS CCCHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA