| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
Click here to switch to the map view.
The map label for this gene is 88658115
Identifier: 88658115
GI number: 88658115
Start: 1146038
End: 1146484
Strand: Direct
Name: 88658115
Synonym: ECH_1122
Alternate gene names: NA
Gene position: 1146038-1146484 (Clockwise)
Preceding gene: 88658428
Following gene: 88658592
Centisome position: 97.43
GC content: 23.49
Gene sequence:
>447_bases ATGAATAATAAAAAATCAAGAGGTCAGGTCTTATTATTTGCAGCTTATAGCATCTTTAAGTATATTAATAGCTGCACAAG TAAGTTTAGGCTAAGTGTAAAATGTTTTGTTTATAATCCTTTAAAGTATTTTTATTACAAAAGCACTTTCTTAAAACTAG GAAAATTTTTCGTAAATTACAACTATAGTAAAACATCAAATTACCTACATAGGAGTTTATTCAAACTTTTTGGTATTATA AGAACAACCAATTTTAAAATTTCTTATTTAAATTTTTTTACTAACCCTAGAGTATTGATAATATACTATAAGATACTAAA AAATAAGTGTAACAATTCTTCCATCAATTATCTTTTGAATAAGTATACTATCAATCCTACAGCAACTAGTTTTATCAATA GTGTTATTATAGGGATATACCCTGGTTTTGTTAATTATAATTATTAA
Upstream 100 bases:
>100_bases TTTTTGACAAATTTATATTTGTGTTTATATGTATATAGGTATATAATAAAGTTTTAGTGTGTCTATTGCTCATTAAGTGA GTGTGTTAAAAGGGTTATGC
Downstream 100 bases:
>100_bases GGTTATATTATGAGCTATGCAAAGGTCTTTATATTAATATGTTTAATATTGCTTGTGCCTTCATTATCCTTTGCAATTGT AAACAATGATTTCTTAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MNNKKSRGQVLLFAAYSIFKYINSCTSKFRLSVKCFVYNPLKYFYYKSTFLKLGKFFVNYNYSKTSNYLHRSLFKLFGII RTTNFKISYLNFFTNPRVLIIYYKILKNKCNNSSINYLLNKYTINPTATSFINSVIIGIYPGFVNYNY
Sequences:
>Translated_148_residues MNNKKSRGQVLLFAAYSIFKYINSCTSKFRLSVKCFVYNPLKYFYYKSTFLKLGKFFVNYNYSKTSNYLHRSLFKLFGII RTTNFKISYLNFFTNPRVLIIYYKILKNKCNNSSINYLLNKYTINPTATSFINSVIIGIYPGFVNYNY >Mature_148_residues MNNKKSRGQVLLFAAYSIFKYINSCTSKFRLSVKCFVYNPLKYFYYKSTFLKLGKFFVNYNYSKTSNYLHRSLFKLFGII RTTNFKISYLNFFTNPRVLIIYYKILKNKCNNSSINYLLNKYTINPTATSFINSVIIGIYPGFVNYNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17584; Mature: 17584
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKKSRGQVLLFAAYSIFKYINSCTSKFRLSVKCFVYNPLKYFYYKSTFLKLGKFFVNY CCCCCCCCCEEEEHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHEEC NYSKTSNYLHRSLFKLFGIIRTTNFKISYLNFFTNPRVLIIYYKILKNKCNNSSINYLLN CCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEEEHHHHCCCCCCCCEEEEE KYTINPTATSFINSVIIGIYPGFVNYNY EEEECCHHHHHHHHHHHEEECCEEECCC >Mature Secondary Structure MNNKKSRGQVLLFAAYSIFKYINSCTSKFRLSVKCFVYNPLKYFYYKSTFLKLGKFFVNY CCCCCCCCCEEEEHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHEEC NYSKTSNYLHRSLFKLFGIIRTTNFKISYLNFFTNPRVLIIYYKILKNKCNNSSINYLLN CCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEEEHHHHCCCCCCCCEEEEE KYTINPTATSFINSVIIGIYPGFVNYNY EEEECCHHHHHHHHHHHEEECCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA