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The map label for this gene is omp-1Q [H]

Identifier: 88658592

GI number: 88658592

Start: 1146494

End: 1147387

Strand: Direct

Name: omp-1Q [H]

Synonym: ECH_1123

Alternate gene names: 88658592

Gene position: 1146494-1147387 (Clockwise)

Preceding gene: 88658115

Following gene: 88658173

Centisome position: 97.47

GC content: 31.77

Gene sequence:

>894_bases
ATGAGCTATGCAAAGGTCTTTATATTAATATGTTTAATATTGCTTGTGCCTTCATTATCCTTTGCAATTGTAAACAATGA
TTTCTTAAAGGACAATATAGGTCATTTTTATATAGGAGGACAATATAAACCAGGTGTTCCACGTTTTAATAGATTTTTAG
TAACTAATAACAACATAAGAGAGCTAATGTCCTCAGATGAAGAGTGTAGAAGTACTATACCTCACATGGTGCAAAGTGTA
GCACAAGGTACTTTACCACCTGAAGCGTTGGAAGAGCTTGCAAAAGGATTGCTACATGGAGGTTATCTTTTTTTTACTTT
ACCTTATAACCCTACATACAAGAAAAATTTATTAGGTGCAGGTGGTGTTATAGGGTATTCAACCACTCATTTTAGAGTAG
AAGTTGAAGCTTTTTATGAGAAGTTCAATTTAACTGCCCCTGCAGGATACCTTCATAAAAATTTTTACGAGTATTTTGCT
TTAGCAACTACAATGGATACTAAACATCCACATCAATCTGCAGAAGATAAATATTATTATATGAAAAACACAGGTATTAC
TTTATCACCTTTTATAATTAATGCATGTTATGATTTTATTTTAAAAAAGACACGCAATGTAGCTCCTTATTTATGTCTTG
GGGTTGGTGGTAATTTTATTGATTTTCTAGATCAAGTAAGCTTTAAATTTGCTTATCAAGCTAAGGTTGGTATTAGTTAT
TTTGTTTCTCCAAATATAGCATTCTTTATTGATGGATCTTTTCATGGACACTTAAATAATCAATTTTCTGATTTGCCAGT
AGTAGATTACTCATCTTCCGGGTTCCCAACTATATCAGCAAAATTTAACGCCAATTTTCTTACTAGCAGTATCGGAATCA
GGTTTATTTCTTAA

Upstream 100 bases:

>100_bases
GAATAAGTATACTATCAATCCTACAGCAACTAGTTTTATCAATAGTGTTATTATAGGGATATACCCTGGTTTTGTTAATT
ATAATTATTAAGGTTATATT

Downstream 100 bases:

>100_bases
ATAGTAGGTCGTATTTATGCAGAAGTTATATATAAGTTTTATAATATTATCTGGGCTGTTATTGCCAAAGTATGTTTTTT
GCATGCACCAAAACAACAAT

Product: major outer membrane protein OMP-1Q

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSYAKVFILICLILLVPSLSFAIVNNDFLKDNIGHFYIGGQYKPGVPRFNRFLVTNNNIRELMSSDEECRSTIPHMVQSV
AQGTLPPEALEELAKGLLHGGYLFFTLPYNPTYKKNLLGAGGVIGYSTTHFRVEVEAFYEKFNLTAPAGYLHKNFYEYFA
LATTMDTKHPHQSAEDKYYYMKNTGITLSPFIINACYDFILKKTRNVAPYLCLGVGGNFIDFLDQVSFKFAYQAKVGISY
FVSPNIAFFIDGSFHGHLNNQFSDLPVVDYSSSGFPTISAKFNANFLTSSIGIRFIS

Sequences:

>Translated_297_residues
MSYAKVFILICLILLVPSLSFAIVNNDFLKDNIGHFYIGGQYKPGVPRFNRFLVTNNNIRELMSSDEECRSTIPHMVQSV
AQGTLPPEALEELAKGLLHGGYLFFTLPYNPTYKKNLLGAGGVIGYSTTHFRVEVEAFYEKFNLTAPAGYLHKNFYEYFA
LATTMDTKHPHQSAEDKYYYMKNTGITLSPFIINACYDFILKKTRNVAPYLCLGVGGNFIDFLDQVSFKFAYQAKVGISY
FVSPNIAFFIDGSFHGHLNNQFSDLPVVDYSSSGFPTISAKFNANFLTSSIGIRFIS
>Mature_296_residues
SYAKVFILICLILLVPSLSFAIVNNDFLKDNIGHFYIGGQYKPGVPRFNRFLVTNNNIRELMSSDEECRSTIPHMVQSVA
QGTLPPEALEELAKGLLHGGYLFFTLPYNPTYKKNLLGAGGVIGYSTTHFRVEVEAFYEKFNLTAPAGYLHKNFYEYFAL
ATTMDTKHPHQSAEDKYYYMKNTGITLSPFIINACYDFILKKTRNVAPYLCLGVGGNFIDFLDQVSFKFAYQAKVGISYF
VSPNIAFFIDGSFHGHLNNQFSDLPVVDYSSSGFPTISAKFNANFLTSSIGIRFIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen msp4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR002566 [H]

Pfam domain/function: PF01617 Surface_Ag_2 [H]

EC number: NA

Molecular weight: Translated: 33378; Mature: 33246

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYAKVFILICLILLVPSLSFAIVNNDFLKDNIGHFYIGGQYKPGVPRFNRFLVTNNNIR
CCHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCEEEECCEECCCCCCCCEEEEECCHHH
ELMSSDEECRSTIPHMVQSVAQGTLPPEALEELAKGLLHGGYLFFTLPYNPTYKKNLLGA
HHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCC
GGVIGYSTTHFRVEVEAFYEKFNLTAPAGYLHKNFYEYFALATTMDTKHPHQSAEDKYYY
CCEEECCCEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
MKNTGITLSPFIINACYDFILKKTRNVAPYLCLGVGGNFIDFLDQVSFKFAYQAKVGISY
EECCCCEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHEEEEEEECCEEE
FVSPNIAFFIDGSFHGHLNNQFSDLPVVDYSSSGFPTISAKFNANFLTSSIGIRFIS
EECCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCEEECCCCEEEEC
>Mature Secondary Structure 
SYAKVFILICLILLVPSLSFAIVNNDFLKDNIGHFYIGGQYKPGVPRFNRFLVTNNNIR
CHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCEEEECCEECCCCCCCCEEEEECCHHH
ELMSSDEECRSTIPHMVQSVAQGTLPPEALEELAKGLLHGGYLFFTLPYNPTYKKNLLGA
HHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCC
GGVIGYSTTHFRVEVEAFYEKFNLTAPAGYLHKNFYEYFALATTMDTKHPHQSAEDKYYY
CCEEECCCEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
MKNTGITLSPFIINACYDFILKKTRNVAPYLCLGVGGNFIDFLDQVSFKFAYQAKVGISY
EECCCCEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHEEEEEEECCEEE
FVSPNIAFFIDGSFHGHLNNQFSDLPVVDYSSSGFPTISAKFNANFLTSSIGIRFIS
EECCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8294020 [H]