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The map label for this gene is omp-1N [H]

Identifier: 88658428

GI number: 88658428

Start: 1145077

End: 1145931

Strand: Direct

Name: omp-1N [H]

Synonym: ECH_1121

Alternate gene names: 88658428

Gene position: 1145077-1145931 (Clockwise)

Preceding gene: 88657980

Following gene: 88658115

Centisome position: 97.35

GC content: 30.41

Gene sequence:

>855_bases
ATGAGTAAAAGGAGTAACAGAAAGTTTGTTTTGTGGGTTATGTTAATATTATTTACACCACATATTTCTTTAGCATCAGT
TTTAAATGACCATAATTCTATGTATGTTGGTATTCAGTACAAGCCAGCCAGACAACACCTATCAAAACTTCTTATAAAAG
AAAGCGCAGCCAACACTGTAGAAGTTTTTGGGTTAAAAAAAGACTTACTAAATGATCTATTAACTGGTATTAAAGATAAT
ACTAATTTTAATATAAAATACAACCCATATTATGAAAATAATCGTTTAGGTTTTTCCGGTATATTTGGATATTACTATAA
CAAAAATTTCAGAATAGAATCTGAACTTTCTTACGAAACTTTCCACATAAAGAACAACGGATATAAAAGAATTGATTGTG
AAAAGCATTTTGCTCTTGCAAAGGAAATAAGCGGTGGTAGTAACAATCCTGCCAATAATAAATATGTTACCCTAATAAAT
AATGGTATTTCACTTACCTCAGCTCTGATCAACGTTTGTTATGATGTTGACGGACTTAAACATAATATAATAACGTATTC
ATGTTTAGGATTTGGAGTAGACACAATTGATTTTCTCAGTAAGTATACTACAAAGTTTTCATACCAAGGAAAATTAGGAG
CTAGTTATACTGTTTCTCCTCAAGTATCGGTTTTTATAGAAGGTTATTATCATGGTTTATTTGGTAAAAAATTTGAGAAA
ATTCCTGTAAATTATCCATGTGACTATCCATCACCAACACCACCAAACAGCAAGCCACATGTTCACACTACAGCATTAGC
TATGTTAAGTATTGGATATTACGGTGGGAGTATTGGAATAAAGTTTATATTATAA

Upstream 100 bases:

>100_bases
AACAATCGATTATTAGTTTTGTTGACTTAATTCTTTTTTAGTATATTTATTTTGCTGTAAGTGTGTGGTTCTTTAAAAAC
AATTATTAAGGTTTAGGTGT

Downstream 100 bases:

>100_bases
AAATATTTTTTGACAAATTTATATTTGTGTTTATATGTATATAGGTATATAATAAAGTTTTAGTGTGTCTATTGCTCATT
AAGTGAGTGTGTTAAAAGGG

Product: major outer membrane protein Omp-1N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MSKRSNRKFVLWVMLILFTPHISLASVLNDHNSMYVGIQYKPARQHLSKLLIKESAANTVEVFGLKKDLLNDLLTGIKDN
TNFNIKYNPYYENNRLGFSGIFGYYYNKNFRIESELSYETFHIKNNGYKRIDCEKHFALAKEISGGSNNPANNKYVTLIN
NGISLTSALINVCYDVDGLKHNIITYSCLGFGVDTIDFLSKYTTKFSYQGKLGASYTVSPQVSVFIEGYYHGLFGKKFEK
IPVNYPCDYPSPTPPNSKPHVHTTALAMLSIGYYGGSIGIKFIL

Sequences:

>Translated_284_residues
MSKRSNRKFVLWVMLILFTPHISLASVLNDHNSMYVGIQYKPARQHLSKLLIKESAANTVEVFGLKKDLLNDLLTGIKDN
TNFNIKYNPYYENNRLGFSGIFGYYYNKNFRIESELSYETFHIKNNGYKRIDCEKHFALAKEISGGSNNPANNKYVTLIN
NGISLTSALINVCYDVDGLKHNIITYSCLGFGVDTIDFLSKYTTKFSYQGKLGASYTVSPQVSVFIEGYYHGLFGKKFEK
IPVNYPCDYPSPTPPNSKPHVHTTALAMLSIGYYGGSIGIKFIL
>Mature_283_residues
SKRSNRKFVLWVMLILFTPHISLASVLNDHNSMYVGIQYKPARQHLSKLLIKESAANTVEVFGLKKDLLNDLLTGIKDNT
NFNIKYNPYYENNRLGFSGIFGYYYNKNFRIESELSYETFHIKNNGYKRIDCEKHFALAKEISGGSNNPANNKYVTLINN
GISLTSALINVCYDVDGLKHNIITYSCLGFGVDTIDFLSKYTTKFSYQGKLGASYTVSPQVSVFIEGYYHGLFGKKFEKI
PVNYPCDYPSPTPPNSKPHVHTTALAMLSIGYYGGSIGIKFIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen msp4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR002566 [H]

Pfam domain/function: PF01617 Surface_Ag_2 [H]

EC number: NA

Molecular weight: Translated: 32095; Mature: 31964

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRSNRKFVLWVMLILFTPHISLASVLNDHNSMYVGIQYKPARQHLSKLLIKESAANTV
CCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCCCCEE
EVFGLKKDLLNDLLTGIKDNTNFNIKYNPYYENNRLGFSGIFGYYYNKNFRIESELSYET
EEEECHHHHHHHHHHCCCCCCEEEEEECCEECCCCCCCCEEEEEEECCCEEEECCCCEEE
FHIKNNGYKRIDCEKHFALAKEISGGSNNPANNKYVTLINNGISLTSALINVCYDVDGLK
EEEECCCCEEECHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCC
HNIITYSCLGFGVDTIDFLSKYTTKFSYQGKLGASYTVSPQVSVFIEGYYHGLFGKKFEK
CCEEEEEEECCCCHHHHHHHHHHHCEEECCCCCCEEEECCCEEEEEEEEHHHHCCCCHHC
IPVNYPCDYPSPTPPNSKPHVHTTALAMLSIGYYGGSIGIKFIL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCEEEEEEC
>Mature Secondary Structure 
SKRSNRKFVLWVMLILFTPHISLASVLNDHNSMYVGIQYKPARQHLSKLLIKESAANTV
CCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCCCCEE
EVFGLKKDLLNDLLTGIKDNTNFNIKYNPYYENNRLGFSGIFGYYYNKNFRIESELSYET
EEEECHHHHHHHHHHCCCCCCEEEEEECCEECCCCCCCCEEEEEEECCCEEEECCCCEEE
FHIKNNGYKRIDCEKHFALAKEISGGSNNPANNKYVTLINNGISLTSALINVCYDVDGLK
EEEECCCCEEECHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCC
HNIITYSCLGFGVDTIDFLSKYTTKFSYQGKLGASYTVSPQVSVFIEGYYHGLFGKKFEK
CCEEEEEEECCCCHHHHHHHHHHHCEEECCCCCCEEEECCCEEEEEEEEHHHHCCCCHHC
IPVNYPCDYPSPTPPNSKPHVHTTALAMLSIGYYGGSIGIKFIL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8294020 [H]