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The map label for this gene is ygfA [C]

Identifier: 88657993

GI number: 88657993

Start: 543792

End: 544313

Strand: Direct

Name: ygfA [C]

Synonym: ECH_0541

Alternate gene names: 88657993

Gene position: 543792-544313 (Clockwise)

Preceding gene: 88658073

Following gene: 88657585

Centisome position: 46.23

GC content: 26.05

Gene sequence:

>522_bases
ATGGTTGTTGAAGACATTGTCAATAAGAAAGCTGAGTTGCGAAAAAAATATAGAAAGTTAAGGAAAGAAGTAAAAAATAA
AAAAGAAGCGTCTTATTCTTTATTACAGAATTATGTCAATAATGTTATCATAGAAGAAATGTCTATAATTTCTGGATATA
TACCTATAGATGGTGAAATTGATGTATTACCGTTAATGGATTATTTAATGCAGCAAAAACATATAGTAGCAATTCCTGTA
ATAGAAGAAAATAGTAAAATATTATTGTTTCATCAATGGAATACAATTAATTCTGTGATTCCAAATATATTAATAGTACC
TCTTATTGCATTTGATAAATGTTTAAATAGGTTGGGTTTTGGAGGAGGGTACTATGATAATACTATTTCTAAATTAAAAC
CAAATTGTAAAGTGATAGGTGTTGCGTATGATATACAATTATGTGATATAGTACCTACTGAAAGCCATGATCAAATTTTA
GATATGGTGATTACAGAAAAGAAAGTTTATAAAAATATATAA

Upstream 100 bases:

>100_bases
GATGGGTTATCTTTAGGTACAACAATACTGAGAGTTGATACAGCAGTTGTTAGTGCATTAGCTTATGTAAAAGAGTATTA
TGGTATGTTGTAGTAGAATT

Downstream 100 bases:

>100_bases
TATCTGATTGCAAGTAATCTGGAGATTTTAATACGTTGGGCTTTAATTTGTGTTTTTTTATAAGTTTTTTTTCATGTTTA
AATTATTGTTTTAATGTACA

Product: 5-formyltetrahydrofolate cyclo-ligase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MVVEDIVNKKAELRKKYRKLRKEVKNKKEASYSLLQNYVNNVIIEEMSIISGYIPIDGEIDVLPLMDYLMQQKHIVAIPV
IEENSKILLFHQWNTINSVIPNILIVPLIAFDKCLNRLGFGGGYYDNTISKLKPNCKVIGVAYDIQLCDIVPTESHDQIL
DMVITEKKVYKNI

Sequences:

>Translated_173_residues
MVVEDIVNKKAELRKKYRKLRKEVKNKKEASYSLLQNYVNNVIIEEMSIISGYIPIDGEIDVLPLMDYLMQQKHIVAIPV
IEENSKILLFHQWNTINSVIPNILIVPLIAFDKCLNRLGFGGGYYDNTISKLKPNCKVIGVAYDIQLCDIVPTESHDQIL
DMVITEKKVYKNI
>Mature_173_residues
MVVEDIVNKKAELRKKYRKLRKEVKNKKEASYSLLQNYVNNVIIEEMSIISGYIPIDGEIDVLPLMDYLMQQKHIVAIPV
IEENSKILLFHQWNTINSVIPNILIVPLIAFDKCLNRLGFGGGYYDNTISKLKPNCKVIGVAYDIQLCDIVPTESHDQIL
DMVITEKKVYKNI

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=183, Percent_Identity=27.8688524590164, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 19895; Mature: 19895

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVEDIVNKKAELRKKYRKLRKEVKNKKEASYSLLQNYVNNVIIEEMSIISGYIPIDGEI
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DVLPLMDYLMQQKHIVAIPVIEENSKILLFHQWNTINSVIPNILIVPLIAFDKCLNRLGF
CHHHHHHHHHCCCCEEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC
GGGYYDNTISKLKPNCKVIGVAYDIQLCDIVPTESHDQILDMVITEKKVYKNI
CCCCHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVVEDIVNKKAELRKKYRKLRKEVKNKKEASYSLLQNYVNNVIIEEMSIISGYIPIDGEI
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DVLPLMDYLMQQKHIVAIPVIEENSKILLFHQWNTINSVIPNILIVPLIAFDKCLNRLGF
CHHHHHHHHHCCCCEEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC
GGGYYDNTISKLKPNCKVIGVAYDIQLCDIVPTESHDQILDMVITEKKVYKNI
CCCCHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]