| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88657976
Identifier: 88657976
GI number: 88657976
Start: 631558
End: 631959
Strand: Reverse
Name: 88657976
Synonym: ECH_0625
Alternate gene names: NA
Gene position: 631959-631558 (Counterclockwise)
Preceding gene: 88657725
Following gene: 88658467
Centisome position: 53.73
GC content: 29.1
Gene sequence:
>402_bases ATGCTAACGAGAGTTATTTATATAGCTTTGTTTTTATTAAGTAGTTGTCATACTATATCTATTCACCATGGCTATCCTGC TTCAGAAGTTAATTTGTGGAATAATGTAAAGGTTGGGGATTTAAGTAGTCAGGTTATACAACTTATAGGGGATCCGTGCA TTATTGAGGAAAATGTATGGTATTATGTTTCTTATAGTATTTATAAGAAGCGTTTTTTTTCAACAAAAGAATATGAATCT CTTGTTTTAAAAATAACTTTTGATTCTCAAGCTAATAAGGTAACGGATATACAAAACATTAAGGTGGATAGAAAGAGTTT AGTAAAATTGCTAAAAAAGAATACACCAGTTACTGGTATACATGATAGCTTACTTCGTCAATTTAGCAATAAATTACAAT AG
Upstream 100 bases:
>100_bases TTGTATTTACTAATAGGTATATATTTAAAAATATATAATATGAAATTGACCAGTTAATTAAATTATGATAACTTTACACG ATACTTATTTTTGAGATGTT
Downstream 100 bases:
>100_bases TAAGTTAAGCAAGTAAAATAGAATTTGCTAATTTTATATTTTATTTCTGTATTCATGATTAATTTATGGATAATGTTGTT TTAGCAAAGACTATGTGTCT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MLTRVIYIALFLLSSCHTISIHHGYPASEVNLWNNVKVGDLSSQVIQLIGDPCIIEENVWYYVSYSIYKKRFFSTKEYES LVLKITFDSQANKVTDIQNIKVDRKSLVKLLKKNTPVTGIHDSLLRQFSNKLQ
Sequences:
>Translated_133_residues MLTRVIYIALFLLSSCHTISIHHGYPASEVNLWNNVKVGDLSSQVIQLIGDPCIIEENVWYYVSYSIYKKRFFSTKEYES LVLKITFDSQANKVTDIQNIKVDRKSLVKLLKKNTPVTGIHDSLLRQFSNKLQ >Mature_133_residues MLTRVIYIALFLLSSCHTISIHHGYPASEVNLWNNVKVGDLSSQVIQLIGDPCIIEENVWYYVSYSIYKKRFFSTKEYES LVLKITFDSQANKVTDIQNIKVDRKSLVKLLKKNTPVTGIHDSLLRQFSNKLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15353; Mature: 15353
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRVIYIALFLLSSCHTISIHHGYPASEVNLWNNVKVGDLSSQVIQLIGDPCIIEENVW CHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEECCHHHHHHHHHCCCEEEECCCE YYVSYSIYKKRFFSTKEYESLVLKITFDSQANKVTDIQNIKVDRKSLVKLLKKNTPVTGI EEEEHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHCCCCHHHHHHHHHCCCCCCCH HDSLLRQFSNKLQ HHHHHHHHHHHCC >Mature Secondary Structure MLTRVIYIALFLLSSCHTISIHHGYPASEVNLWNNVKVGDLSSQVIQLIGDPCIIEENVW CHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEECCHHHHHHHHHCCCEEEECCCE YYVSYSIYKKRFFSTKEYESLVLKITFDSQANKVTDIQNIKVDRKSLVKLLKKNTPVTGI EEEEHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHCCCCHHHHHHHHHCCCCCCCH HDSLLRQFSNKLQ HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA