| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88657969
Identifier: 88657969
GI number: 88657969
Start: 587676
End: 588233
Strand: Direct
Name: 88657969
Synonym: ECH_0578
Alternate gene names: NA
Gene position: 587676-588233 (Clockwise)
Preceding gene: 88657830
Following gene: 88657850
Centisome position: 49.96
GC content: 25.81
Gene sequence:
>558_bases ATGATATTTCACATAGATGGTGTAGATGCTGATAAATCTAAGCTTTTGAATAAACTTATTACACATAAAAATTATATATG GTTCTATCGGTCAATATGTATTGGCATTATTACAACAGATAATAAGTTTGTTTTACTAAAAGACGAATCAATTCCTTTTT ATTATGAACAACAAGTTGTACCAAGTTATATATTTTTTATGAAAGGTAGAGAAGAGGGTGTTAAAGTATGGCATTGTGTT TTAATTAAAGGATGTCAAGTCAGCCAATTTGTAGATAAAACTTCCATTATTATTAATATGGAAAAGGAAAGGAATCCTAT AGGAATAATTGTTCATATATGTGATATACAAGATTATGGTGAAATAATATATTCCGGTATAGGTAAAATGAGTATGTCTA ATTTCAAAAAAAATCTTAAAGACATATGTAAAAGTAGTGCTAATCCTCAATTAAGTACTGTTACTTTTCCAATTAGTTAT TGGAGTAAATTAGTACAAAATGTTGTAGAAATAATTCCGATGCAAAAAATAAATTATACAAGAATTAACAATAACTAA
Upstream 100 bases:
>100_bases AAAACTTTATTATAAATAAAGATAAATTTATTAAATTTTTATATTTATTTATTAAAATATTATATATAATGTCTAATTAT TAATTAATAATTAGAATAAA
Downstream 100 bases:
>100_bases TTTCCAGCTAACTTAGACCTTAATTTTTTATGTTTGTGTATTGAAATTAGAAGCTATTTTCTCAATTATCATTTATTCAG TAATATTTGTCATACTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MIFHIDGVDADKSKLLNKLITHKNYIWFYRSICIGIITTDNKFVLLKDESIPFYYEQQVVPSYIFFMKGREEGVKVWHCV LIKGCQVSQFVDKTSIIINMEKERNPIGIIVHICDIQDYGEIIYSGIGKMSMSNFKKNLKDICKSSANPQLSTVTFPISY WSKLVQNVVEIIPMQKINYTRINNN
Sequences:
>Translated_185_residues MIFHIDGVDADKSKLLNKLITHKNYIWFYRSICIGIITTDNKFVLLKDESIPFYYEQQVVPSYIFFMKGREEGVKVWHCV LIKGCQVSQFVDKTSIIINMEKERNPIGIIVHICDIQDYGEIIYSGIGKMSMSNFKKNLKDICKSSANPQLSTVTFPISY WSKLVQNVVEIIPMQKINYTRINNN >Mature_185_residues MIFHIDGVDADKSKLLNKLITHKNYIWFYRSICIGIITTDNKFVLLKDESIPFYYEQQVVPSYIFFMKGREEGVKVWHCV LIKGCQVSQFVDKTSIIINMEKERNPIGIIVHICDIQDYGEIIYSGIGKMSMSNFKKNLKDICKSSANPQLSTVTFPISY WSKLVQNVVEIIPMQKINYTRINNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21470; Mature: 21470
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFHIDGVDADKSKLLNKLITHKNYIWFYRSICIGIITTDNKFVLLKDESIPFYYEQQVV CEEEECCCCCHHHHHHHHHHHCCCHHEEEEEEEEEEEECCCEEEEEECCCCCEEEHHHHH PSYIFFMKGREEGVKVWHCVLIKGCQVSQFVDKTSIIINMEKERNPIGIIVHICDIQDYG HHEEEEECCCCCCCEEEEEEEECCCCHHHHHCCEEEEEEECCCCCCEEEEEEEECCCHHH EIIYSGIGKMSMSNFKKNLKDICKSSANPQLSTVTFPISYWSKLVQNVVEIIPMQKINYT HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCEEE RINNN EECCC >Mature Secondary Structure MIFHIDGVDADKSKLLNKLITHKNYIWFYRSICIGIITTDNKFVLLKDESIPFYYEQQVV CEEEECCCCCHHHHHHHHHHHCCCHHEEEEEEEEEEEECCCEEEEEECCCCCEEEHHHHH PSYIFFMKGREEGVKVWHCVLIKGCQVSQFVDKTSIIINMEKERNPIGIIVHICDIQDYG HHEEEEECCCCCCCEEEEEEEECCCCHHHHHCCEEEEEEECCCCCCEEEEEEEECCCHHH EIIYSGIGKMSMSNFKKNLKDICKSSANPQLSTVTFPISYWSKLVQNVVEIIPMQKINYT HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCEEE RINNN EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA