| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88657830
Identifier: 88657830
GI number: 88657830
Start: 585858
End: 586139
Strand: Direct
Name: 88657830
Synonym: ECH_0576
Alternate gene names: NA
Gene position: 585858-586139 (Clockwise)
Preceding gene: 88658176
Following gene: 88657969
Centisome position: 49.81
GC content: 26.6
Gene sequence:
>282_bases ATGTCCCTTTCCAATCTTAGTTCAAAAGATGAAAATAATGTAGTTATCGAAAATTTGAAACGTTATATAGAAAGAATTGA GAAGCTAGAATCTGAGAAAGAAGAAATAAGTCAATATATTAGAAAAGTATATAATGAAGCAAATAGTAATGGATTTAATG CAAAGGTAATGAGGCAAATAGTAAAATTAAGAAAAATGAATAGTGATGATAGAGAAGAGCATGAAATGCTTTTAATGACT TATAAAAGAGCACTTGGGATATTAGTTGAAATTGATGAATAA
Upstream 100 bases:
>100_bases AAACTAAAGTTCTATTCGTTTTATAATTTGGTTTTGAATAATTATTTATGTTCAAGTAAATTGTGGTATACTGCTATATA TGGTAGAATGAGAAAATAGC
Downstream 100 bases:
>100_bases TTTTTTTGTAAAGTAATAACTACTTATAAAAAATAAAAAACAGTATGAGTTTAAACAAGTTTTATGTATTCTCTAGTATT GTTTTTGAAGTTTTAACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSLSNLSSKDENNVVIENLKRYIERIEKLESEKEEISQYIRKVYNEANSNGFNAKVMRQIVKLRKMNSDDREEHEMLLMT YKRALGILVEIDE
Sequences:
>Translated_93_residues MSLSNLSSKDENNVVIENLKRYIERIEKLESEKEEISQYIRKVYNEANSNGFNAKVMRQIVKLRKMNSDDREEHEMLLMT YKRALGILVEIDE >Mature_92_residues SLSNLSSKDENNVVIENLKRYIERIEKLESEKEEISQYIRKVYNEANSNGFNAKVMRQIVKLRKMNSDDREEHEMLLMTY KRALGILVEIDE
Specific function: Unknown
COG id: COG3750
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0335 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018753 [H]
Pfam domain/function: PF10073 DUF2312 [H]
EC number: NA
Molecular weight: Translated: 11053; Mature: 10922
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSNLSSKDENNVVIENLKRYIERIEKLESEKEEISQYIRKVYNEANSNGFNAKVMRQI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH VKLRKMNSDDREEHEMLLMTYKRALGILVEIDE HHHHHCCCCCHHHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure SLSNLSSKDENNVVIENLKRYIERIEKLESEKEEISQYIRKVYNEANSNGFNAKVMRQI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH VKLRKMNSDDREEHEMLLMTYKRALGILVEIDE HHHHHCCCCCHHHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA