Definition Ehrlichia chaffeensis str. Arkansas, complete genome.
Accession NC_007799
Length 1,176,248

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The map label for this gene is 88657830

Identifier: 88657830

GI number: 88657830

Start: 585858

End: 586139

Strand: Direct

Name: 88657830

Synonym: ECH_0576

Alternate gene names: NA

Gene position: 585858-586139 (Clockwise)

Preceding gene: 88658176

Following gene: 88657969

Centisome position: 49.81

GC content: 26.6

Gene sequence:

>282_bases
ATGTCCCTTTCCAATCTTAGTTCAAAAGATGAAAATAATGTAGTTATCGAAAATTTGAAACGTTATATAGAAAGAATTGA
GAAGCTAGAATCTGAGAAAGAAGAAATAAGTCAATATATTAGAAAAGTATATAATGAAGCAAATAGTAATGGATTTAATG
CAAAGGTAATGAGGCAAATAGTAAAATTAAGAAAAATGAATAGTGATGATAGAGAAGAGCATGAAATGCTTTTAATGACT
TATAAAAGAGCACTTGGGATATTAGTTGAAATTGATGAATAA

Upstream 100 bases:

>100_bases
AAACTAAAGTTCTATTCGTTTTATAATTTGGTTTTGAATAATTATTTATGTTCAAGTAAATTGTGGTATACTGCTATATA
TGGTAGAATGAGAAAATAGC

Downstream 100 bases:

>100_bases
TTTTTTTGTAAAGTAATAACTACTTATAAAAAATAAAAAACAGTATGAGTTTAAACAAGTTTTATGTATTCTCTAGTATT
GTTTTTGAAGTTTTAACGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MSLSNLSSKDENNVVIENLKRYIERIEKLESEKEEISQYIRKVYNEANSNGFNAKVMRQIVKLRKMNSDDREEHEMLLMT
YKRALGILVEIDE

Sequences:

>Translated_93_residues
MSLSNLSSKDENNVVIENLKRYIERIEKLESEKEEISQYIRKVYNEANSNGFNAKVMRQIVKLRKMNSDDREEHEMLLMT
YKRALGILVEIDE
>Mature_92_residues
SLSNLSSKDENNVVIENLKRYIERIEKLESEKEEISQYIRKVYNEANSNGFNAKVMRQIVKLRKMNSDDREEHEMLLMTY
KRALGILVEIDE

Specific function: Unknown

COG id: COG3750

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0335 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018753 [H]

Pfam domain/function: PF10073 DUF2312 [H]

EC number: NA

Molecular weight: Translated: 11053; Mature: 10922

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSNLSSKDENNVVIENLKRYIERIEKLESEKEEISQYIRKVYNEANSNGFNAKVMRQI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
VKLRKMNSDDREEHEMLLMTYKRALGILVEIDE
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
SLSNLSSKDENNVVIENLKRYIERIEKLESEKEEISQYIRKVYNEANSNGFNAKVMRQI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
VKLRKMNSDDREEHEMLLMTYKRALGILVEIDE
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA