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The map label for this gene is virB8-2

Identifier: 88657850

GI number: 88657850

Start: 588503

End: 589192

Strand: Direct

Name: virB8-2

Synonym: ECH_0579

Alternate gene names: NA

Gene position: 588503-589192 (Clockwise)

Preceding gene: 88657969

Following gene: 88658620

Centisome position: 50.03

GC content: 25.36

Gene sequence:

>690_bases
ATGGATGATACTCAAACTAATGACGATAGGTATATTGGAAGTAATCAATATTTTCAAGATGCATTAAACTGGTATTGTGG
TCGTTATTTATTATGTATTACTGAAAGAGCTTGGTTGTTTGTAATATCACTTTTTTTATCTTCTATATTACTAATACTAA
TACTTGATATATTTTCATATTTTCCATTAAAAACAAATTTTTCCTTTACCAAATATACAGATCATTACACAGATGAGTTT
TCTGTAATAAAAAAGTTGAGTACCAATAATGAAGACAGTGAAGAGACATTGTTATCACAATACCTTGTTGCACAGTATGT
AAAAAAATATGAATCATATCTATACAATGATTTGGATAGTCAATTCAATTTCATAAAGAATAATTCTTCAAGAAAAATAT
ATTTAGCATTTAAAGAAATGATAGCTTCCCATCATTATATTGATAATTCAAAATATAATGCAATATCAATTGAAACAACA
ATTCATAATGTGAAGCTTTTATCAAAAGATTTTACTTCTTCAAATAATGCCATTGTTACTTTTAAAAAACAAATTGCGAT
AAATGGTGTAATATCACATGTTCAATCTTATAAAGTACTGGTAACCTTTTCTTTATCTAGTATTAAAATGGCTATATCAG
GAATTATGCCATTAGAGTTTCTTGTACACGACTATAAAAAACTAGATTAA

Upstream 100 bases:

>100_bases
ATTACTATAAATTTAGTGTGATATAATGGATAAATTTAAATACCATTACTTCTACAGTAGTGTTATTTATATGTTTGTAT
TATGTATTATGTAGAATTTT

Downstream 100 bases:

>100_bases
AGTCGATTAAAGCTTATAAGACAAGACATAGGCTTTCATTATAACTATGATTAAATTTACTCCAATTAGAGTTGCATCAC
ACTCATACGAACTTTATGTA

Product: type IV secretion system protein VirB8

Products: NA

Alternate protein names: Type IV Secretion System ; VirB8 Protein

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MDDTQTNDDRYIGSNQYFQDALNWYCGRYLLCITERAWLFVISLFLSSILLILILDIFSYFPLKTNFSFTKYTDHYTDEF
SVIKKLSTNNEDSEETLLSQYLVAQYVKKYESYLYNDLDSQFNFIKNNSSRKIYLAFKEMIASHHYIDNSKYNAISIETT
IHNVKLLSKDFTSSNNAIVTFKKQIAINGVISHVQSYKVLVTFSLSSIKMAISGIMPLEFLVHDYKKLD

Sequences:

>Translated_229_residues
MDDTQTNDDRYIGSNQYFQDALNWYCGRYLLCITERAWLFVISLFLSSILLILILDIFSYFPLKTNFSFTKYTDHYTDEF
SVIKKLSTNNEDSEETLLSQYLVAQYVKKYESYLYNDLDSQFNFIKNNSSRKIYLAFKEMIASHHYIDNSKYNAISIETT
IHNVKLLSKDFTSSNNAIVTFKKQIAINGVISHVQSYKVLVTFSLSSIKMAISGIMPLEFLVHDYKKLD
>Mature_229_residues
MDDTQTNDDRYIGSNQYFQDALNWYCGRYLLCITERAWLFVISLFLSSILLILILDIFSYFPLKTNFSFTKYTDHYTDEF
SVIKKLSTNNEDSEETLLSQYLVAQYVKKYESYLYNDLDSQFNFIKNNSSRKIYLAFKEMIASHHYIDNSKYNAISIETT
IHNVKLLSKDFTSSNNAIVTFKKQIAINGVISHVQSYKVLVTFSLSSIKMAISGIMPLEFLVHDYKKLD

Specific function: Unknown

COG id: COG3736

COG function: function code U; Type IV secretory pathway, component VirB8

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26748; Mature: 26748

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDTQTNDDRYIGSNQYFQDALNWYCGRYLLCITERAWLFVISLFLSSILLILILDIFSY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPLKTNFSFTKYTDHYTDEFSVIKKLSTNNEDSEETLLSQYLVAQYVKKYESYLYNDLDS
CCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFNFIKNNSSRKIYLAFKEMIASHHYIDNSKYNAISIETTIHNVKLLSKDFTSSNNAIVT
HHHHHCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCEEEE
FKKQIAINGVISHVQSYKVLVTFSLSSIKMAISGIMPLEFLVHDYKKLD
EHHHHHHHHHHHHHHHEEEEEEEEHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MDDTQTNDDRYIGSNQYFQDALNWYCGRYLLCITERAWLFVISLFLSSILLILILDIFSY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPLKTNFSFTKYTDHYTDEFSVIKKLSTNNEDSEETLLSQYLVAQYVKKYESYLYNDLDS
CCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFNFIKNNSSRKIYLAFKEMIASHHYIDNSKYNAISIETTIHNVKLLSKDFTSSNNAIVT
HHHHHCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCEEEE
FKKQIAINGVISHVQSYKVLVTFSLSSIKMAISGIMPLEFLVHDYKKLD
EHHHHHHHHHHHHHHHEEEEEEEEHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA