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The map label for this gene is bioC [C]

Identifier: 88657758

GI number: 88657758

Start: 734747

End: 735541

Strand: Reverse

Name: bioC [C]

Synonym: ECH_0725

Alternate gene names: 88657758

Gene position: 735541-734747 (Counterclockwise)

Preceding gene: 88658296

Following gene: 88658022

Centisome position: 62.53

GC content: 27.92

Gene sequence:

>795_bases
ATGCTTATTTTTGATCGTGCCCTTGTAAGGTTTTATAGGGATAGGCTATCTTGTAATAAGGATAATGACTTTATATTTTC
TGCAATTAGTGATATTTTATTAGATAAGATTGCTTTGTTTTCGGTTGCTACAGGATTGGCTTTAAATCTTGGTGTTAGGA
CTAACTCTTTTGTTGAAAATTTATTACATAAAAAGCTAATATCTTCTAAGGAACAAGTAGTTCAATGTGATTTATCATAT
TGTGTGTTATATAATGTGAATGGCGGGTATAAGATAGTAGCCGATGAAGAGGCATTACCATTCCGTAATAATGTTTTTGA
TCTTGTTATTAGCAATGTATCATTGCATAATGTTAATAATTTATTTAGTGTACTATTAAATATATATAATATCATAAAAA
GCAAGGGAGTTTTTCTTGCTGCATTATTTGGTAGTAAAACTCTTTATGAATTGAAACATTCGATTATCAGGGCTGAGATG
GATTTTGGTATTGCACCTAGAGTTTTGCCGTTCATTAATGTTCAAGATATTATTTCTTTATTACAGAAAATTAGATATTC
TGATATTGTAGTAGATGTTAATACTATTGTGGTAAAGTATAGTGATATATATACTTTGTTTAGGGATTTAAAAAATATGG
GTGAAGGAAATGTGTTACGTGTTAGAAATAAATATCCTTTAACTAGAACTGTTATTACAAAGATTTTTGAGAATTATAAA
CAATATTTTTCAGTAGATAAAATTAGTATTCCTGCTACTTTTGAGATTATTACTTTGAAGGGAAGTAAAGTGTAA

Upstream 100 bases:

>100_bases
TTGGGAATAATAATCGCTCATTCAGTAATAGTAGAAATGGTCATGATGTTCCTAGGAAGCCTAGGTTTTTTTAATTTAGA
TTGCTACGTAGAAGATCTCT

Downstream 100 bases:

>100_bases
AGGTTATAAAGGTGTGAGGATAAATTGAAATGGATGAAAGTCATATAAGAAATTTTGCTATAATAGCTCATATTGATCAT
GGTAAGTCTACGTTAGCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MLIFDRALVRFYRDRLSCNKDNDFIFSAISDILLDKIALFSVATGLALNLGVRTNSFVENLLHKKLISSKEQVVQCDLSY
CVLYNVNGGYKIVADEEALPFRNNVFDLVISNVSLHNVNNLFSVLLNIYNIIKSKGVFLAALFGSKTLYELKHSIIRAEM
DFGIAPRVLPFINVQDIISLLQKIRYSDIVVDVNTIVVKYSDIYTLFRDLKNMGEGNVLRVRNKYPLTRTVITKIFENYK
QYFSVDKISIPATFEIITLKGSKV

Sequences:

>Translated_264_residues
MLIFDRALVRFYRDRLSCNKDNDFIFSAISDILLDKIALFSVATGLALNLGVRTNSFVENLLHKKLISSKEQVVQCDLSY
CVLYNVNGGYKIVADEEALPFRNNVFDLVISNVSLHNVNNLFSVLLNIYNIIKSKGVFLAALFGSKTLYELKHSIIRAEM
DFGIAPRVLPFINVQDIISLLQKIRYSDIVVDVNTIVVKYSDIYTLFRDLKNMGEGNVLRVRNKYPLTRTVITKIFENYK
QYFSVDKISIPATFEIITLKGSKV
>Mature_264_residues
MLIFDRALVRFYRDRLSCNKDNDFIFSAISDILLDKIALFSVATGLALNLGVRTNSFVENLLHKKLISSKEQVVQCDLSY
CVLYNVNGGYKIVADEEALPFRNNVFDLVISNVSLHNVNNLFSVLLNIYNIIKSKGVFLAALFGSKTLYELKHSIIRAEM
DFGIAPRVLPFINVQDIISLLQKIRYSDIVVDVNTIVVKYSDIYTLFRDLKNMGEGNVLRVRNKYPLTRTVITKIFENYK
QYFSVDKISIPATFEIITLKGSKV

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI40018642, Length=270, Percent_Identity=32.962962962963, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI86792933, Length=153, Percent_Identity=35.9477124183007, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17535003, Length=275, Percent_Identity=27.2727272727273, Blast_Score=102, Evalue=1e-22,
Organism=Drosophila melanogaster, GI19922210, Length=272, Percent_Identity=33.0882352941176, Blast_Score=136, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 30114; Mature: 30114

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIFDRALVRFYRDRLSCNKDNDFIFSAISDILLDKIALFSVATGLALNLGVRTNSFVEN
CEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHH
LLHKKLISSKEQVVQCDLSYCVLYNVNGGYKIVADEEALPFRNNVFDLVISNVSLHNVNN
HHHHHHHCCHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHCCCCCHHHHHH
LFSVLLNIYNIIKSKGVFLAALFGSKTLYELKHSIIRAEMDFGIAPRVLPFINVQDIISL
HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHH
LQKIRYSDIVVDVNTIVVKYSDIYTLFRDLKNMGEGNVLRVRNKYPLTRTVITKIFENYK
HHHHCHHHEEEEEEEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHH
QYFSVDKISIPATFEIITLKGSKV
HHHCCCEEECCCEEEEEEECCCCC
>Mature Secondary Structure
MLIFDRALVRFYRDRLSCNKDNDFIFSAISDILLDKIALFSVATGLALNLGVRTNSFVEN
CEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHH
LLHKKLISSKEQVVQCDLSYCVLYNVNGGYKIVADEEALPFRNNVFDLVISNVSLHNVNN
HHHHHHHCCHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHCCCCCHHHHHH
LFSVLLNIYNIIKSKGVFLAALFGSKTLYELKHSIIRAEMDFGIAPRVLPFINVQDIISL
HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHH
LQKIRYSDIVVDVNTIVVKYSDIYTLFRDLKNMGEGNVLRVRNKYPLTRTVITKIFENYK
HHHHCHHHEEEEEEEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHH
QYFSVDKISIPATFEIITLKGSKV
HHHCCCEEECCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]