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The map label for this gene is trxB [C]

Identifier: 88657729

GI number: 88657729

Start: 652059

End: 653075

Strand: Reverse

Name: trxB [C]

Synonym: ECH_0649

Alternate gene names: 88657729

Gene position: 653075-652059 (Counterclockwise)

Preceding gene: 88657647

Following gene: 88658414

Centisome position: 55.52

GC content: 32.55

Gene sequence:

>1017_bases
ATGACAGATTATGTAACTGATATTGCGGTAATAGGAGCTGGTCCTGTTGGGATATTTACTGTATTTCAGGCTGGTATGTT
GAAAATGCGATGTTGTGTTATTGATGCATTAAGTGAAATTGGTGGGCAATGTCTTGCATTGTATCCAGAGAAACCGATAT
ATGATATTCCTGGATATCCAGTAATTAATGGTAAGGAATTAATAGATAGTTTAAAAAAGCAGTCTGAGCCTTTTAATCCT
CAATATTTGTTAGGACAAGTTGCTGAAAAAATAGAAGATTACTCAGATTATTTTTTGATAAGAACTACAACAGGAATTGT
AGTACAAAGTAAAGTTATTATCATTGCTGCTGGAGCTGGAGCATTTGGTCCAAATCGTCTTCCTATAGATAATATTCTTG
ATTATGAGAATAAATCAGTATTTTACCAAGTGAGAAAGGTTTCAGATTTTTGTGATAAAAATATTATGATAGCAGGAGGA
GGTGACTCAGCTGCTGATTGGGCAGTTGAGCTTTCTAAGGTTGCTAAACAGTTATATGTAGTACATAGAAGGAAAAATTT
TCGTTGTGCTCCTAATACTGCATTGCAGATGGATAATTTATCACAGAGTGGAAAAATAAAGATTATTGTTCCATATCAAG
TTAAAAAATTATGTGGTGAAAATGGTAAACTGCATTCTGTAATTGTTAAGAATATTACGAATCATGAAGAAATGGCGCTA
CAAGTTGATTATTTATTTCCATTTTTTGGTACATCTGCAAATCTTGGTCCTATATTGAATTGGGGAATGGAAGTAAAAAA
CTATCAAATTCTTGTTAATGCTGAGACTTGTCTAACAAATCGCAATAGAATATATGCAGTTGGTGATATAGCTACATATC
CAGGAAAACTTAAGTTAATACTTACAGGATTTTCAGAGGCTGCAATGGCATGTCATCATATATATCATGTAATATACCCT
AATTCTCCGTTAAATTTTCAATATTCTACTTCAAAAGGTATACCAGAAAATTGTTAG

Upstream 100 bases:

>100_bases
ATATTTAGTATATGCAGTAATTTTATAGAAAATTTCTAGATAAATTTTCTTCTTTAGTTTAAGGTATTAGCGTAAAACTT
GGCTAATATATGAGAAAAAT

Downstream 100 bases:

>100_bases
ATGAATTGTAAAAGCTAGGTTTATTATTTAAAATAACAATATATTTTTGGTAATTTATATCGAAAGCCTCACATACATAG
GATATTTAGTTTATACAATT

Product: pyridine nucleotide-disulphide oxidoreductase family protein

Products: NA

Alternate protein names: FNR; Fd-NADP+ reductase

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MTDYVTDIAVIGAGPVGIFTVFQAGMLKMRCCVIDALSEIGGQCLALYPEKPIYDIPGYPVINGKELIDSLKKQSEPFNP
QYLLGQVAEKIEDYSDYFLIRTTTGIVVQSKVIIIAAGAGAFGPNRLPIDNILDYENKSVFYQVRKVSDFCDKNIMIAGG
GDSAADWAVELSKVAKQLYVVHRRKNFRCAPNTALQMDNLSQSGKIKIIVPYQVKKLCGENGKLHSVIVKNITNHEEMAL
QVDYLFPFFGTSANLGPILNWGMEVKNYQILVNAETCLTNRNRIYAVGDIATYPGKLKLILTGFSEAAMACHHIYHVIYP
NSPLNFQYSTSKGIPENC

Sequences:

>Translated_338_residues
MTDYVTDIAVIGAGPVGIFTVFQAGMLKMRCCVIDALSEIGGQCLALYPEKPIYDIPGYPVINGKELIDSLKKQSEPFNP
QYLLGQVAEKIEDYSDYFLIRTTTGIVVQSKVIIIAAGAGAFGPNRLPIDNILDYENKSVFYQVRKVSDFCDKNIMIAGG
GDSAADWAVELSKVAKQLYVVHRRKNFRCAPNTALQMDNLSQSGKIKIIVPYQVKKLCGENGKLHSVIVKNITNHEEMAL
QVDYLFPFFGTSANLGPILNWGMEVKNYQILVNAETCLTNRNRIYAVGDIATYPGKLKLILTGFSEAAMACHHIYHVIYP
NSPLNFQYSTSKGIPENC
>Mature_337_residues
TDYVTDIAVIGAGPVGIFTVFQAGMLKMRCCVIDALSEIGGQCLALYPEKPIYDIPGYPVINGKELIDSLKKQSEPFNPQ
YLLGQVAEKIEDYSDYFLIRTTTGIVVQSKVIIIAAGAGAFGPNRLPIDNILDYENKSVFYQVRKVSDFCDKNIMIAGGG
DSAADWAVELSKVAKQLYVVHRRKNFRCAPNTALQMDNLSQSGKIKIIVPYQVKKLCGENGKLHSVIVKNITNHEEMALQ
VDYLFPFFGTSANLGPILNWGMEVKNYQILVNAETCLTNRNRIYAVGDIATYPGKLKLILTGFSEAAMACHHIYHVIYPN
SPLNFQYSTSKGIPENC

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ferredoxin--NADP reductase type 2 family

Homologues:

Organism=Saccharomyces cerevisiae, GI6321898, Length=296, Percent_Identity=23.6486486486486, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): FENR_EHRCR (Q2GGH5)

Other databases:

- EMBL:   CP000236
- RefSeq:   YP_507458.1
- ProteinModelPortal:   Q2GGH5
- SMR:   Q2GGH5
- STRING:   Q2GGH5
- GeneID:   3927526
- GenomeReviews:   CP000236_GR
- KEGG:   ech:ECH_0649
- TIGR:   ECH_0649
- eggNOG:   COG0492
- HOGENOM:   HBG669726
- OMA:   FQVFELG
- ProtClustDB:   CLSK749573
- BioCyc:   ECHA205920:ECH_0649-MONOMER
- HAMAP:   MF_01685
- InterPro:   IPR013027
- InterPro:   IPR022890
- InterPro:   IPR001327
- InterPro:   IPR000103
- PRINTS:   PR00368
- PRINTS:   PR00469

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2

EC number: =1.18.1.2

Molecular weight: Translated: 37425; Mature: 37294

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: BINDING 35-35 BINDING 43-43 BINDING 48-48 BINDING 88-88 BINDING 122-122 BINDING 289-289 BINDING 330-330

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDYVTDIAVIGAGPVGIFTVFQAGMLKMRCCVIDALSEIGGQCLALYPEKPIYDIPGYP
CCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC
VINGKELIDSLKKQSEPFNPQYLLGQVAEKIEDYSDYFLIRTTTGIVVQSKVIIIAAGAG
EECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEEEEEECCC
AFGPNRLPIDNILDYENKSVFYQVRKVSDFCDKNIMIAGGGDSAADWAVELSKVAKQLYV
CCCCCCCCHHHHHCCCCCEEEEEHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
VHRRKNFRCAPNTALQMDNLSQSGKIKIIVPYQVKKLCGENGKLHSVIVKNITNHEEMAL
HHHCCCCEECCCCEEEECCCCCCCCEEEEECHHHHHHHCCCCCEEEEHHHHCCCCCCEEE
QVDYLFPFFGTSANLGPILNWGMEVKNYQILVNAETCLTNRNRIYAVGDIATYPGKLKLI
EEEEEEEECCCCCCCCHHHHCCEEEEEEEEEEECHHHCCCCCEEEEEECEEECCCEEEEE
LTGFSEAAMACHHIYHVIYPNSPLNFQYSTSKGIPENC
EECCHHHHHHHHHEEEEEECCCCCCEEECCCCCCCCCC
>Mature Secondary Structure 
TDYVTDIAVIGAGPVGIFTVFQAGMLKMRCCVIDALSEIGGQCLALYPEKPIYDIPGYP
CCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC
VINGKELIDSLKKQSEPFNPQYLLGQVAEKIEDYSDYFLIRTTTGIVVQSKVIIIAAGAG
EECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEEEEEECCC
AFGPNRLPIDNILDYENKSVFYQVRKVSDFCDKNIMIAGGGDSAADWAVELSKVAKQLYV
CCCCCCCCHHHHHCCCCCEEEEEHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
VHRRKNFRCAPNTALQMDNLSQSGKIKIIVPYQVKKLCGENGKLHSVIVKNITNHEEMAL
HHHCCCCEECCCCEEEECCCCCCCCEEEEECHHHHHHHCCCCCEEEEHHHHCCCCCCEEE
QVDYLFPFFGTSANLGPILNWGMEVKNYQILVNAETCLTNRNRIYAVGDIATYPGKLKLI
EEEEEEEECCCCCCCCHHHHCCEEEEEEEEEEECHHHCCCCCEEEEEECEEECCCEEEEE
LTGFSEAAMACHHIYHVIYPNSPLNFQYSTSKGIPENC
EECCHHHHHHHHHEEEEEECCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA