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The map label for this gene is 88608883

Identifier: 88608883

GI number: 88608883

Start: 488865

End: 488975

Strand: Reverse

Name: 88608883

Synonym: NSE_0562

Alternate gene names: NA

Gene position: 488975-488865 (Counterclockwise)

Preceding gene: 88608881

Following gene: 88608733

Centisome position: 56.92

GC content: 31.53

Gene sequence:

>111_bases
TTGTTTAAGCATATGGAAATTTTCTTAGTTGCATACTGTAAGGTAGGATTTGTGCGAAGAGTAAGTAAGTCATGTGGTAA
ATTTATTAAAAATGGAAGAGGGTTTATGTAG

Upstream 100 bases:

>100_bases
CCGTCCTGCTGTGTAGTACAGCAAAAATGCGAACAAGTGTGCTAGCTCAGTGACCCATAAAAAACCTGATTCGCTCATTT
CTCACTTGTAACTCATCTAT

Downstream 100 bases:

>100_bases
CATGTTCGAGGATAATTGACTGTTTTTAGTTTTGTTATTCTTCGACAGAGTTAGTCGCTTTGTTTGAAACTATCCTGTCG
ACTTTTTAGTCCGCAGTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 36; Mature: 36

Protein sequence:

>36_residues
MFKHMEIFLVAYCKVGFVRRVSKSCGKFIKNGRGFM

Sequences:

>Translated_36_residues
MFKHMEIFLVAYCKVGFVRRVSKSCGKFIKNGRGFM
>Mature_36_residues
MFKHMEIFLVAYCKVGFVRRVSKSCGKFIKNGRGFM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4216; Mature: 4216

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
8.3 %Met     (Translated Protein)
13.9 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
8.3 %Met     (Mature Protein)
13.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKHMEIFLVAYCKVGFVRRVSKSCGKFIKNGRGFM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFKHMEIFLVAYCKVGFVRRVSKSCGKFIKNGRGFM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA