Click here to switch to the map view.

The map label for this gene is 88608881

Identifier: 88608881

GI number: 88608881

Start: 491173

End: 491685

Strand: Reverse

Name: 88608881

Synonym: NSE_0565

Alternate gene names: NA

Gene position: 491685-491173 (Counterclockwise)

Preceding gene: 88608146

Following gene: 88608883

Centisome position: 57.24

GC content: 39.96

Gene sequence:

>513_bases
ATGTGTATAGTTGGGCTAAGTGGCTTTGGTTTGTATAAACATTTTGACAAGGCTCCTGCATTGAGGGAAAGTATTTTGCT
TTACGATGCTCTCAGCACAGAAAATCTTCGTGATTCAAAGGGAAAACTACAAAGCATCGTGGCTGCGAAGCATCAGCCCT
ATGCAAGTATTGCTGCTATCTACCTTGCTAAGTTCCCACCTGAGTATTTAGATGATTCAAAAAGGAAAGGGTTGTACAAT
TTTGTTTGTCTCAATTCACCTTATGTGTACATTCGTGAACTTTCTAAGTTAAACCTCGAATTACTCGATCGGCATGTTGA
AAACCATTCTATCTATGGCTCAACCTCACAGTTTCTGGATGCAGTTATGCAATTTTTGGAGGGTAAAGTAGATAGTGCCG
AGATATCTCTAAGTAACCTGGGGGCGGCTGTTGATGTGAATCCGTATTTAAGGAGCCTTTCTAATAGACTTTTAGAAGCT
ATTTCTTATCAGCATTCTGTATCCGATTCGTGA

Upstream 100 bases:

>100_bases
CCTTGGACATTGTTTTTGGTGAGGTAGACAGATGATCGATTGGTACGGCCTGGTTTTTGAGAGGAGTAAGAGTTTTTATT
TGGTGTCACTGGTGATTTTC

Downstream 100 bases:

>100_bases
TCCTGCTTCCTTTTATCTGTCTTCAGTAGGTTGCTCTCTCATTGGGGTGGCATCGTTCCTCTTTTGTTGTTGATCCATTT
CCTGTTGTACCCGCACGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MCIVGLSGFGLYKHFDKAPALRESILLYDALSTENLRDSKGKLQSIVAAKHQPYASIAAIYLAKFPPEYLDDSKRKGLYN
FVCLNSPYVYIRELSKLNLELLDRHVENHSIYGSTSQFLDAVMQFLEGKVDSAEISLSNLGAAVDVNPYLRSLSNRLLEA
ISYQHSVSDS

Sequences:

>Translated_170_residues
MCIVGLSGFGLYKHFDKAPALRESILLYDALSTENLRDSKGKLQSIVAAKHQPYASIAAIYLAKFPPEYLDDSKRKGLYN
FVCLNSPYVYIRELSKLNLELLDRHVENHSIYGSTSQFLDAVMQFLEGKVDSAEISLSNLGAAVDVNPYLRSLSNRLLEA
ISYQHSVSDS
>Mature_170_residues
MCIVGLSGFGLYKHFDKAPALRESILLYDALSTENLRDSKGKLQSIVAAKHQPYASIAAIYLAKFPPEYLDDSKRKGLYN
FVCLNSPYVYIRELSKLNLELLDRHVENHSIYGSTSQFLDAVMQFLEGKVDSAEISLSNLGAAVDVNPYLRSLSNRLLEA
ISYQHSVSDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18996; Mature: 18996

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIVGLSGFGLYKHFDKAPALRESILLYDALSTENLRDSKGKLQSIVAAKHQPYASIAAI
CEEEECCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
YLAKFPPEYLDDSKRKGLYNFVCLNSPYVYIRELSKLNLELLDRHVENHSIYGSTSQFLD
HHHHCCHHHCCCHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
AVMQFLEGKVDSAEISLSNLGAAVDVNPYLRSLSNRLLEAISYQHSVSDS
HHHHHHCCCCCCCEEEHHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MCIVGLSGFGLYKHFDKAPALRESILLYDALSTENLRDSKGKLQSIVAAKHQPYASIAAI
CEEEECCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
YLAKFPPEYLDDSKRKGLYNFVCLNSPYVYIRELSKLNLELLDRHVENHSIYGSTSQFLD
HHHHCCHHHCCCHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
AVMQFLEGKVDSAEISLSNLGAAVDVNPYLRSLSNRLLEAISYQHSVSDS
HHHHHHCCCCCCCEEEHHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA