| Definition | Neorickettsia sennetsu str. Miyayama chromosome, complete genome. |
|---|---|
| Accession | NC_007798 |
| Length | 859,006 |
Click here to switch to the map view.
The map label for this gene is proP [H]
Identifier: 88608756
GI number: 88608756
Start: 694897
End: 696144
Strand: Reverse
Name: proP [H]
Synonym: NSE_0783
Alternate gene names: 88608756
Gene position: 696144-694897 (Counterclockwise)
Preceding gene: 88608641
Following gene: 88608831
Centisome position: 81.04
GC content: 41.03
Gene sequence:
>1248_bases GTGTCCGAGAAGTCTGGGTTCATTAAACAAATTATTGTAACCCTTCTATGTAACAGCCTCGTGTGGTACGACTATGCACT TTATGGTCACCTTATAGGTATCATTAATATCTTATTCTTCCCTGAAATTAACCCGGTAACACAACTCCTCTCATCTTTTG GAACATTTGCTGTTGGTTTCTTGATGAGGCCAATAGGGGCGGTTTTTTTTGGGCACATAGGAGACAAATACGGTAGAAAA ATTGGGGTTCTGCTATCCCTGATGATGATGTTCTTGCCTGTGGGGATGATAGCGGTTTTACCGACATATCACAGTATTGG TACGTCGGCGATTGTCCTGCTTATTTTGATTAGATTAATTCAAGGATTTGCTCTTGGTGGGGAAGTTGGAAATGTACTCT TCTTGATAGAATGCAGTCCTCAGAAGTATAGGGGATTCTTTGGCAGTTTTGAGGTGCTCAGTGCAGTGATAGGTGCTGCA ATGAGCAGTGTCGTGGTTCTGATATGTAGAAACATAATTCCTGAGGAAGCGTTTTTGAGTTGGGGTTGGAGAGTACCTTT TGTTATAGGAACATGTGTCGGTGTCTTGGGTGCAGTTCTTAGAAATACACTTGGCGAAACGCCAGTCTTCGAGAGTGTCA AGAGGTCTGACATCCTACCTGTAACGAAACTCTTTGGTGAATATAAGAAGGCATTTTTTGTTTCAATTGGAATAGACAGT TTGGAAGAAACAAGTCTGTATCTTTTTCTTGTTTTCTTGGATGTTTATTTTGCAAATAAAATGGGGTTTTCTGGTGCAAC CGTTGGATTAGTACATCTAATGTTCTTGCTTTTGCTTGCTGTGTTGACCTTGTTTTCGGCGCTACTATCTGATTTCTTCG GTAGGAGACTAATACTCTCATTAGCTGCAATACTCGCGATTGTGTCTGCGTATCCGATCTTTTTTCTCATAGAAAGCGGG GGGTTGGGGAATATTATTATTGCAAAAATCTTGTTTGTGGTGATAGTGGGGTTCTCATTGGGGCCCGTGAGCACCGCCGT GTATGAAATATTTCCTGCTGAGATTTCTTATACAGGACTGGCAATCTCCCGAAATATCTCAAGTGCGCTGTTTGGAGGTA TGGCACCAGCTTTTACAATGTTTCTTATTGCAGTGACAGGTAATAATCTTTCAGCTGCGATTCCTTTGATTCTTGTTGGG GTTTTGACTTTAGGTTCTCTATATTTTTATTCAAAAGTATTACACTAG
Upstream 100 bases:
>100_bases TTCGGGTTTTTATCCTTTGTTTGGACTTGCTCTGGTAATATGCTATATCTAGAAAGTCTAGATTTTAGTTTATCTATCCG ATCTACTGTAGTAGCGTGCC
Downstream 100 bases:
>100_bases CTCTACAAAATTGCATTACAATGTACCTCATCTGGTAGTAGGTGTTTCTGACTTTGTATCCAAGGCGGGTTATTTTAAAA CTATGTCTATTGATGAGAGT
Product: major facilitator family transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MSEKSGFIKQIIVTLLCNSLVWYDYALYGHLIGIINILFFPEINPVTQLLSSFGTFAVGFLMRPIGAVFFGHIGDKYGRK IGVLLSLMMMFLPVGMIAVLPTYHSIGTSAIVLLILIRLIQGFALGGEVGNVLFLIECSPQKYRGFFGSFEVLSAVIGAA MSSVVVLICRNIIPEEAFLSWGWRVPFVIGTCVGVLGAVLRNTLGETPVFESVKRSDILPVTKLFGEYKKAFFVSIGIDS LEETSLYLFLVFLDVYFANKMGFSGATVGLVHLMFLLLLAVLTLFSALLSDFFGRRLILSLAAILAIVSAYPIFFLIESG GLGNIIIAKILFVVIVGFSLGPVSTAVYEIFPAEISYTGLAISRNISSALFGGMAPAFTMFLIAVTGNNLSAAIPLILVG VLTLGSLYFYSKVLH
Sequences:
>Translated_415_residues MSEKSGFIKQIIVTLLCNSLVWYDYALYGHLIGIINILFFPEINPVTQLLSSFGTFAVGFLMRPIGAVFFGHIGDKYGRK IGVLLSLMMMFLPVGMIAVLPTYHSIGTSAIVLLILIRLIQGFALGGEVGNVLFLIECSPQKYRGFFGSFEVLSAVIGAA MSSVVVLICRNIIPEEAFLSWGWRVPFVIGTCVGVLGAVLRNTLGETPVFESVKRSDILPVTKLFGEYKKAFFVSIGIDS LEETSLYLFLVFLDVYFANKMGFSGATVGLVHLMFLLLLAVLTLFSALLSDFFGRRLILSLAAILAIVSAYPIFFLIESG GLGNIIIAKILFVVIVGFSLGPVSTAVYEIFPAEISYTGLAISRNISSALFGGMAPAFTMFLIAVTGNNLSAAIPLILVG VLTLGSLYFYSKVLH >Mature_414_residues SEKSGFIKQIIVTLLCNSLVWYDYALYGHLIGIINILFFPEINPVTQLLSSFGTFAVGFLMRPIGAVFFGHIGDKYGRKI GVLLSLMMMFLPVGMIAVLPTYHSIGTSAIVLLILIRLIQGFALGGEVGNVLFLIECSPQKYRGFFGSFEVLSAVIGAAM SSVVVLICRNIIPEEAFLSWGWRVPFVIGTCVGVLGAVLRNTLGETPVFESVKRSDILPVTKLFGEYKKAFFVSIGIDSL EETSLYLFLVFLDVYFANKMGFSGATVGLVHLMFLLLLAVLTLFSALLSDFFGRRLILSLAAILAIVSAYPIFFLIESGG LGNIIIAKILFVVIVGFSLGPVSTAVYEIFPAEISYTGLAISRNISSALFGGMAPAFTMFLIAVTGNNLSAAIPLILVGV LTLGSLYFYSKVLH
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=409, Percent_Identity=31.0513447432763, Blast_Score=212, Evalue=5e-56, Organism=Escherichia coli, GI1788292, Length=397, Percent_Identity=31.9899244332494, Blast_Score=186, Evalue=2e-48, Organism=Escherichia coli, GI1788942, Length=365, Percent_Identity=31.5068493150685, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1789941, Length=381, Percent_Identity=30.4461942257218, Blast_Score=150, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 44955; Mature: 44823
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKSGFIKQIIVTLLCNSLVWYDYALYGHLIGIINILFFPEINPVTQLLSSFGTFAVGF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LMRPIGAVFFGHIGDKYGRKIGVLLSLMMMFLPVGMIAVLPTYHSIGTSAIVLLILIRLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGFALGGEVGNVLFLIECSPQKYRGFFGSFEVLSAVIGAAMSSVVVLICRNIIPEEAFLS HHHCCCCCCCCEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH WGWRVPFVIGTCVGVLGAVLRNTLGETPVFESVKRSDILPVTKLFGEYKKAFFVSIGIDS CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCC LEETSLYLFLVFLDVYFANKMGFSGATVGLVHLMFLLLLAVLTLFSALLSDFFGRRLILS HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAILAIVSAYPIFFLIESGGLGNIIIAKILFVVIVGFSLGPVSTAVYEIFPAEISYTGL HHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHCCCCH AISRNISSALFGGMAPAFTMFLIAVTGNNLSAAIPLILVGVLTLGSLYFYSKVLH HHHHHHHHHHHHCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEKSGFIKQIIVTLLCNSLVWYDYALYGHLIGIINILFFPEINPVTQLLSSFGTFAVGF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LMRPIGAVFFGHIGDKYGRKIGVLLSLMMMFLPVGMIAVLPTYHSIGTSAIVLLILIRLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGFALGGEVGNVLFLIECSPQKYRGFFGSFEVLSAVIGAAMSSVVVLICRNIIPEEAFLS HHHCCCCCCCCEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH WGWRVPFVIGTCVGVLGAVLRNTLGETPVFESVKRSDILPVTKLFGEYKKAFFVSIGIDS CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCC LEETSLYLFLVFLDVYFANKMGFSGATVGLVHLMFLLLLAVLTLFSALLSDFFGRRLILS HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAILAIVSAYPIFFLIESGGLGNIIIAKILFVVIVGFSLGPVSTAVYEIFPAEISYTGL HHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHCCCCH AISRNISSALFGGMAPAFTMFLIAVTGNNLSAAIPLILVGVLTLGSLYFYSKVLH HHHHHHHHHHHHCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]