Definition Neorickettsia sennetsu str. Miyayama chromosome, complete genome.
Accession NC_007798
Length 859,006

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The map label for this gene is 88608586

Identifier: 88608586

GI number: 88608586

Start: 575151

End: 575558

Strand: Direct

Name: 88608586

Synonym: NSE_0656

Alternate gene names: NA

Gene position: 575151-575558 (Clockwise)

Preceding gene: 88608455

Following gene: 88608237

Centisome position: 66.96

GC content: 46.57

Gene sequence:

>408_bases
ATGCCACATCCAAGACACCTAAAACCAACAACATTAAAAGACTTCCTACCTGAAGGACTTACGAGTTCTTCAAATAGTGA
TGAAGAGTCAGAGAAAAACCAAACATCTGAACCACAGGGTGGACAAGATCAATCAAATGATATGAGAGAAGGAGCAGCTG
GTGGAGGTTCCGGAGGAAGCAACACCGCTCCCGCAGCAGATACAAAAGGTCCATTGCTATACCTGCAAAAAGTTAGAAGT
GCACTGCGCCCTACTAACCCTTTTGGACCTTTTCCTCAGAGCAAAGAACCTCTTTCTGCTGCATGCACAAATCCATCTGC
CACAGCACCAGGGTCAAAATTATCGGCAAGTGACACGGAGAAACACGCGGCAGATCAGGATAAAAATCGTGGCGGTGGAG
TCACATGA

Upstream 100 bases:

>100_bases
GAATGTTCCTAGTCGTATCAAGTAAAAAAATAGTAAGAAAATAGACAATTTTTTAATAAATCAAATCTACAATGAGACTG
TTTTATCAGAACAGTTACGC

Downstream 100 bases:

>100_bases
AAACGCCAAGAATTGACATACTACATCCTACTGTTCATAGTACAGTTGATGGAAAGTACGAGACCATGGATGCACCTCAT
TTGTCAATCTCATTGATGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MPHPRHLKPTTLKDFLPEGLTSSSNSDEESEKNQTSEPQGGQDQSNDMREGAAGGGSGGSNTAPAADTKGPLLYLQKVRS
ALRPTNPFGPFPQSKEPLSAACTNPSATAPGSKLSASDTEKHAADQDKNRGGGVT

Sequences:

>Translated_135_residues
MPHPRHLKPTTLKDFLPEGLTSSSNSDEESEKNQTSEPQGGQDQSNDMREGAAGGGSGGSNTAPAADTKGPLLYLQKVRS
ALRPTNPFGPFPQSKEPLSAACTNPSATAPGSKLSASDTEKHAADQDKNRGGGVT
>Mature_134_residues
PHPRHLKPTTLKDFLPEGLTSSSNSDEESEKNQTSEPQGGQDQSNDMREGAAGGGSGGSNTAPAADTKGPLLYLQKVRSA
LRPTNPFGPFPQSKEPLSAACTNPSATAPGSKLSASDTEKHAADQDKNRGGGVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13958; Mature: 13827

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHPRHLKPTTLKDFLPEGLTSSSNSDEESEKNQTSEPQGGQDQSNDMREGAAGGGSGGS
CCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCC
NTAPAADTKGPLLYLQKVRSALRPTNPFGPFPQSKEPLSAACTNPSATAPGSKLSASDTE
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCH
KHAADQDKNRGGGVT
HHHCCCCCCCCCCCC
>Mature Secondary Structure 
PHPRHLKPTTLKDFLPEGLTSSSNSDEESEKNQTSEPQGGQDQSNDMREGAAGGGSGGS
CCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCC
NTAPAADTKGPLLYLQKVRSALRPTNPFGPFPQSKEPLSAACTNPSATAPGSKLSASDTE
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCH
KHAADQDKNRGGGVT
HHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA