Click here to switch to the map view.

The map label for this gene is 88608556

Identifier: 88608556

GI number: 88608556

Start: 853738

End: 855135

Strand: Direct

Name: 88608556

Synonym: NSE_0967

Alternate gene names: NA

Gene position: 853738-855135 (Clockwise)

Preceding gene: 88607982

Following gene: 88608180

Centisome position: 99.39

GC content: 34.19

Gene sequence:

>1398_bases
GTGAAAAGACAGTATTCCACGGAGGAGTTTCTAAAATTCTTTAAAGAATCATTTAAAACTCTTTTCCCTGCCAAAAAGTT
CGTAAAGTGTGGATACATAAATGTCATATCAGACAGATTGGTTGCCTGCTTAAACGGGAAAATCAATAGGTTGATAATCA
ACATTCCTCCTAGACATATGAAATCCACCTTAGTTAGTGTTGTGTTCCCAGCTTTTGTTCTTTCAAAAGAACCCTCAAAA
GGAATAATAGTAGCAAGTTATTCGAGCCTACTAAGCACTAAACATTCACTCGAAACAAAACTCGTTATGTCTTCTGAGTG
GTACAAAAAAAAGTTCAAAGACACTGTCATATCAAAACATCACAACACAAAAAATAAATTTTTAACTACCAAGTTAGGAT
TCCGGCTTGCAACATCAATTTCAGGAACACTTACTGGAGAAGGAGCAGACATCATAGTAGCTGATGATCCAATAAATGCA
CTACAGGCAAACAGTAACACATTTAGAGAAAGGACAAAGACTTGGTTCCTAAACACATTTATGACACGCCTAAATCATAG
TAAAAAGAGTATAGTAATCATTGTTATGCAGAGGCTTCATTACGATGATATATGTGGTCACTTAACAAGAACTTCGGACA
AGTGGCATGTTATATCACTTCCACTTATTGCAGAGAGGAAAGAAAAAATTACTTCTATAAACTCAAAAAAGATTCTTTTA
AAAAGGAAGGAAGGCGAAATTTTAAATAGAAACTATTTAAAACACGAAAATATACCAAAACTGAAAGCAGAGATAGGCAC
ATACGTTTTTGCCTCACAGTACCAACAAAATCCAATTTCAAATATAAACTCGATTATTAGAAGAGAGTGGATAAAGCGTT
ACTTAGAAAAAGAAGAGATAAGTGAAATATTATATATATCTCAAAGCTGGGATACAGCAGCTTTTAATACTCAACAGAGT
GATTATACAGTCTGCATTACATTTGCGAGATCGAAAACAGCATTTTATGTTTTAGACGTGTATAGAGAAAAACTAGATTA
TCCTGAAATAAAAAGAGCAATTGTTGAAAACGCAGAGAAATGGAAAGCAAATTACGTTCTTATTGAGAACAAATCAAGTG
GACAAGCTTTAGTACAAGAGCTCAGAAGCTCAACAGCTCTACCAATAGTTTCTGTTACCCCAGTTAGAAAAAAAATAGAA
AGACTCTACAGTGTCGTTTCAATATTTGAATCAGGGAAGTTCTATTTACCGTATTCCAGTGAATGGCTGACAAATTTCGA
ACTGGAGCTTTTTAGCTTTCCAGGATCGATTTACGATGACCAAATAGACAGTCTTACACAGTATTTGAACTACGAAATTA
CGAAAAGTTATCCCCAATTGAGTATAAGATTTCTCTAG

Upstream 100 bases:

>100_bases
TTAAAGCCGCTTTCCTTTCCAAAGTAAGTAAATTTTGCTTCTTTAAAAGACAAAATACAAATAGAATTTTCTACTTTCTA
ATACTCTACAAAACGTGTAG

Downstream 100 bases:

>100_bases
AATCACAATGTTGATAAGTACGTGTAAAACCTGTTTATACAGGGTTTATTGTTTATTGAAATCTTTAATAGATCCGGTTG
TTTTTAAAATCGTTCAGGAT

Product: phage protein

Products: NA

Alternate protein names: Terminase Large Subunit; Phage Protein-Like; Phage Protein; Phage Protein C-Terminal; Phage Terminase Protein; Phage Protein C-Terminal Domain; Gp2 Protein; Phage Large Subunit Terminase; Terminase-Like Family Protein; Large Subunit Terminase TerL; Large Terminase Subunit; Helicase; Phage Terminase-Like Protein; LOW QUALITY PROTEIN Terminase Large Subunit; Phage-Related; Phage Terminase Large Subunit TerL; Chaperone And Heat Shock Protein; Phage-Related Terminase

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MKRQYSTEEFLKFFKESFKTLFPAKKFVKCGYINVISDRLVACLNGKINRLIINIPPRHMKSTLVSVVFPAFVLSKEPSK
GIIVASYSSLLSTKHSLETKLVMSSEWYKKKFKDTVISKHHNTKNKFLTTKLGFRLATSISGTLTGEGADIIVADDPINA
LQANSNTFRERTKTWFLNTFMTRLNHSKKSIVIIVMQRLHYDDICGHLTRTSDKWHVISLPLIAERKEKITSINSKKILL
KRKEGEILNRNYLKHENIPKLKAEIGTYVFASQYQQNPISNINSIIRREWIKRYLEKEEISEILYISQSWDTAAFNTQQS
DYTVCITFARSKTAFYVLDVYREKLDYPEIKRAIVENAEKWKANYVLIENKSSGQALVQELRSSTALPIVSVTPVRKKIE
RLYSVVSIFESGKFYLPYSSEWLTNFELELFSFPGSIYDDQIDSLTQYLNYEITKSYPQLSIRFL

Sequences:

>Translated_465_residues
MKRQYSTEEFLKFFKESFKTLFPAKKFVKCGYINVISDRLVACLNGKINRLIINIPPRHMKSTLVSVVFPAFVLSKEPSK
GIIVASYSSLLSTKHSLETKLVMSSEWYKKKFKDTVISKHHNTKNKFLTTKLGFRLATSISGTLTGEGADIIVADDPINA
LQANSNTFRERTKTWFLNTFMTRLNHSKKSIVIIVMQRLHYDDICGHLTRTSDKWHVISLPLIAERKEKITSINSKKILL
KRKEGEILNRNYLKHENIPKLKAEIGTYVFASQYQQNPISNINSIIRREWIKRYLEKEEISEILYISQSWDTAAFNTQQS
DYTVCITFARSKTAFYVLDVYREKLDYPEIKRAIVENAEKWKANYVLIENKSSGQALVQELRSSTALPIVSVTPVRKKIE
RLYSVVSIFESGKFYLPYSSEWLTNFELELFSFPGSIYDDQIDSLTQYLNYEITKSYPQLSIRFL
>Mature_465_residues
MKRQYSTEEFLKFFKESFKTLFPAKKFVKCGYINVISDRLVACLNGKINRLIINIPPRHMKSTLVSVVFPAFVLSKEPSK
GIIVASYSSLLSTKHSLETKLVMSSEWYKKKFKDTVISKHHNTKNKFLTTKLGFRLATSISGTLTGEGADIIVADDPINA
LQANSNTFRERTKTWFLNTFMTRLNHSKKSIVIIVMQRLHYDDICGHLTRTSDKWHVISLPLIAERKEKITSINSKKILL
KRKEGEILNRNYLKHENIPKLKAEIGTYVFASQYQQNPISNINSIIRREWIKRYLEKEEISEILYISQSWDTAAFNTQQS
DYTVCITFARSKTAFYVLDVYREKLDYPEIKRAIVENAEKWKANYVLIENKSSGQALVQELRSSTALPIVSVTPVRKKIE
RLYSVVSIFESGKFYLPYSSEWLTNFELELFSFPGSIYDDQIDSLTQYLNYEITKSYPQLSIRFL

Specific function: Unknown

COG id: COG5410

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53950; Mature: 53950

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRQYSTEEFLKFFKESFKTLFPAKKFVKCGYINVISDRLVACLNGKINRLIINIPPRHM
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCHHH
KSTLVSVVFPAFVLSKEPSKGIIVASYSSLLSTKHSLETKLVMSSEWYKKKFKDTVISKH
HHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCC
HNTKNKFLTTKLGFRLATSISGTLTGEGADIIVADDPINALQANSNTFRERTKTWFLNTF
CCCCCCEEEHHHCCEEECCCCCEEECCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHH
MTRLNHSKKSIVIIVMQRLHYDDICGHLTRTSDKWHVISLPLIAERKEKITSINSKKILL
HHHHCCCCCEEEEEEEHHHCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCEEEE
KRKEGEILNRNYLKHENIPKLKAEIGTYVFASQYQQNPISNINSIIRREWIKRYLEKEEI
EECCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHH
SEILYISQSWDTAAFNTQQSDYTVCITFARSKTAFYVLDVYREKLDYPEIKRAIVENAEK
HHHEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEHHHHHHHHCCCHHHHHHHHHCHHH
WKANYVLIENKSSGQALVQELRSSTALPIVSVTPVRKKIERLYSVVSIFESGKFYLPYSS
CCCCEEEEECCCCCHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCEEECCCC
EWLTNFELELFSFPGSIYDDQIDSLTQYLNYEITKSYPQLSIRFL
CCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEECCCCCEEEEEC
>Mature Secondary Structure
MKRQYSTEEFLKFFKESFKTLFPAKKFVKCGYINVISDRLVACLNGKINRLIINIPPRHM
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCHHH
KSTLVSVVFPAFVLSKEPSKGIIVASYSSLLSTKHSLETKLVMSSEWYKKKFKDTVISKH
HHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCC
HNTKNKFLTTKLGFRLATSISGTLTGEGADIIVADDPINALQANSNTFRERTKTWFLNTF
CCCCCCEEEHHHCCEEECCCCCEEECCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHH
MTRLNHSKKSIVIIVMQRLHYDDICGHLTRTSDKWHVISLPLIAERKEKITSINSKKILL
HHHHCCCCCEEEEEEEHHHCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCEEEE
KRKEGEILNRNYLKHENIPKLKAEIGTYVFASQYQQNPISNINSIIRREWIKRYLEKEEI
EECCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHH
SEILYISQSWDTAAFNTQQSDYTVCITFARSKTAFYVLDVYREKLDYPEIKRAIVENAEK
HHHEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEHHHHHHHHCCCHHHHHHHHHCHHH
WKANYVLIENKSSGQALVQELRSSTALPIVSVTPVRKKIERLYSVVSIFESGKFYLPYSS
CCCCEEEEECCCCCHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCEEECCCC
EWLTNFELELFSFPGSIYDDQIDSLTQYLNYEITKSYPQLSIRFL
CCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA