Click here to switch to the map view.

The map label for this gene is 88608515

Identifier: 88608515

GI number: 88608515

Start: 528480

End: 529865

Strand: Direct

Name: 88608515

Synonym: NSE_0605

Alternate gene names: NA

Gene position: 528480-529865 (Clockwise)

Preceding gene: 88607992

Following gene: 88608694

Centisome position: 61.52

GC content: 36.87

Gene sequence:

>1386_bases
ATGCTGGACAATAAATTTAAAAATCTTGTGGAAACCTTAATCCAAACCGATATTTTTGCTTTAGATACAGTACTAGAGCT
GAATCTATCCCTAAAAAATCAGCAAGAGAAACTAAACTCTATGAAGATGCTATTACAAGAAGCAGAAAATTCATTCAATG
AAGGGTTGAATTCTGCAATGGGAATGGCAAATGAATCCGAAAAACTCATACAAGGTGCGATGAGTTCCCTTCTAGACACA
CTCCAGGCAATTGTGTTGTTTGCAAACCCTAACAAAACCAGAGACCCTATGCTCCCAACGAAATACAGGGAAAACATTAC
TATACGGCTAAGAGAGACGCACAAGAAATTTCTTAGCACCATAAGTAAACTGCATCTATACAATGAGATTCCCACGCATG
AGAAAGCTACCGAATACATATACAAAATATTTCAAGATGCAACAACACTTGTAGTGGATGTCTTAGAAAAATCAGGTAGA
GAACAGCAAGAGGCAACCTATGAAGAGTACGAAAACAAAGCCCAGACTAATCGCGTCAACTCTTTTACGGCAATTACAGC
ACCTCAGGCCTATAGGAAAATGGTAACGGAAACGCTTACTCAGGCAAATCCCACACTTGAAAGTGAAGCACTCATAAAGC
TTATCGAAGATACAATCAAGAGTGAGACAACAGCAGTGGAAAGAACGATTCAGATTCTAGGAGAACATGCCAAAAAATAT
GCTAAAGAAGGAGAATCAGAAAAAGAACTGGGAAAAAGTGTATTAAAATCAATAGAGCAAGTTAGGGATTTAGTCAGAAC
AAGCCTGGTACAACACATCGCAGGACTTATCAAGATAAAAGCAAGGTTCTCAGTTGAGCCAGTAGATCCAGCTAAATTAA
AACAAAGAAAGGATAAAGGTAAGTCACAACGGTTATTCAACCTTGTTATGAAAAAGATTATTCAATTTAAAGAAAAAGTC
GGTAATGCAAAAAAGAATATCCCCATAAATGACAAGCCAACTAAAGGAGAAAACCCCTATTCTAGCGTGCTAAAAAAGCA
ATTCGAAGAATCAACTAAAACCACACCAGAAAGCAAGAATACCATTAAGGAGAAAAGAAAATCATCTCCCACCGTACCAG
AAAAAAAGCCTTCCATAGGAAAAACAGCTATGACGAAACTGAGTAACAATGGCATTTTAAAAAATCAGAAAAAATTATCT
TTTGATATGTTAAAAAAAGAAACTTTTACGCCAAAAACTAACAACGTTGTCCAACAGAAAAAAGATGCTTCAACTCAAAC
AGAGAATATCGTCCAACAGAAAAGAGATGCCTCAAGCCAGACAGGGAGTAACATTGTTATTTCTGACACAAAGAAGGTAA
TAGAAACTACACAGAGCCACAGGTAA

Upstream 100 bases:

>100_bases
CTAGTATGTAATGAGTATATCCCACTATAGTTAGCATAGATATTTAATAATATTCTAATTAAAAGATATAGATAATATTT
CTTTATATACTTATCTACGC

Downstream 100 bases:

>100_bases
TCAATGGTTCTGGTTTAGGAAGTTCAACTTTGGGAAGGGTTTGCATGAATAGATGAAAGCACGTTTTCTCCTCATATAAG
CCTTTTGCGTGCCTGTAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MLDNKFKNLVETLIQTDIFALDTVLELNLSLKNQQEKLNSMKMLLQEAENSFNEGLNSAMGMANESEKLIQGAMSSLLDT
LQAIVLFANPNKTRDPMLPTKYRENITIRLRETHKKFLSTISKLHLYNEIPTHEKATEYIYKIFQDATTLVVDVLEKSGR
EQQEATYEEYENKAQTNRVNSFTAITAPQAYRKMVTETLTQANPTLESEALIKLIEDTIKSETTAVERTIQILGEHAKKY
AKEGESEKELGKSVLKSIEQVRDLVRTSLVQHIAGLIKIKARFSVEPVDPAKLKQRKDKGKSQRLFNLVMKKIIQFKEKV
GNAKKNIPINDKPTKGENPYSSVLKKQFEESTKTTPESKNTIKEKRKSSPTVPEKKPSIGKTAMTKLSNNGILKNQKKLS
FDMLKKETFTPKTNNVVQQKKDASTQTENIVQQKRDASSQTGSNIVISDTKKVIETTQSHR

Sequences:

>Translated_461_residues
MLDNKFKNLVETLIQTDIFALDTVLELNLSLKNQQEKLNSMKMLLQEAENSFNEGLNSAMGMANESEKLIQGAMSSLLDT
LQAIVLFANPNKTRDPMLPTKYRENITIRLRETHKKFLSTISKLHLYNEIPTHEKATEYIYKIFQDATTLVVDVLEKSGR
EQQEATYEEYENKAQTNRVNSFTAITAPQAYRKMVTETLTQANPTLESEALIKLIEDTIKSETTAVERTIQILGEHAKKY
AKEGESEKELGKSVLKSIEQVRDLVRTSLVQHIAGLIKIKARFSVEPVDPAKLKQRKDKGKSQRLFNLVMKKIIQFKEKV
GNAKKNIPINDKPTKGENPYSSVLKKQFEESTKTTPESKNTIKEKRKSSPTVPEKKPSIGKTAMTKLSNNGILKNQKKLS
FDMLKKETFTPKTNNVVQQKKDASTQTENIVQQKRDASSQTGSNIVISDTKKVIETTQSHR
>Mature_461_residues
MLDNKFKNLVETLIQTDIFALDTVLELNLSLKNQQEKLNSMKMLLQEAENSFNEGLNSAMGMANESEKLIQGAMSSLLDT
LQAIVLFANPNKTRDPMLPTKYRENITIRLRETHKKFLSTISKLHLYNEIPTHEKATEYIYKIFQDATTLVVDVLEKSGR
EQQEATYEEYENKAQTNRVNSFTAITAPQAYRKMVTETLTQANPTLESEALIKLIEDTIKSETTAVERTIQILGEHAKKY
AKEGESEKELGKSVLKSIEQVRDLVRTSLVQHIAGLIKIKARFSVEPVDPAKLKQRKDKGKSQRLFNLVMKKIIQFKEKV
GNAKKNIPINDKPTKGENPYSSVLKKQFEESTKTTPESKNTIKEKRKSSPTVPEKKPSIGKTAMTKLSNNGILKNQKKLS
FDMLKKETFTPKTNNVVQQKKDASTQTENIVQQKRDASSQTGSNIVISDTKKVIETTQSHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52280; Mature: 52280

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDNKFKNLVETLIQTDIFALDTVLELNLSLKNQQEKLNSMKMLLQEAENSFNEGLNSAM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMANESEKLIQGAMSSLLDTLQAIVLFANPNKTRDPMLPTKYRENITIRLRETHKKFLST
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCEEEEEHHHHHHHHHH
ISKLHLYNEIPTHEKATEYIYKIFQDATTLVVDVLEKSGREQQEATYEEYENKAQTNRVN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
SFTAITAPQAYRKMVTETLTQANPTLESEALIKLIEDTIKSETTAVERTIQILGEHAKKY
CCEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKEGESEKELGKSVLKSIEQVRDLVRTSLVQHIAGLIKIKARFSVEPVDPAKLKQRKDKG
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
KSQRLFNLVMKKIIQFKEKVGNAKKNIPINDKPTKGENPYSSVLKKQFEESTKTTPESKN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHH
TIKEKRKSSPTVPEKKPSIGKTAMTKLSNNGILKNQKKLSFDMLKKETFTPKTNNVVQQK
HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHH
KDASTQTENIVQQKRDASSQTGSNIVISDTKKVIETTQSHR
HHCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHCCC
>Mature Secondary Structure
MLDNKFKNLVETLIQTDIFALDTVLELNLSLKNQQEKLNSMKMLLQEAENSFNEGLNSAM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMANESEKLIQGAMSSLLDTLQAIVLFANPNKTRDPMLPTKYRENITIRLRETHKKFLST
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCEEEEEHHHHHHHHHH
ISKLHLYNEIPTHEKATEYIYKIFQDATTLVVDVLEKSGREQQEATYEEYENKAQTNRVN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
SFTAITAPQAYRKMVTETLTQANPTLESEALIKLIEDTIKSETTAVERTIQILGEHAKKY
CCEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKEGESEKELGKSVLKSIEQVRDLVRTSLVQHIAGLIKIKARFSVEPVDPAKLKQRKDKG
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
KSQRLFNLVMKKIIQFKEKVGNAKKNIPINDKPTKGENPYSSVLKKQFEESTKTTPESKN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHH
TIKEKRKSSPTVPEKKPSIGKTAMTKLSNNGILKNQKKLSFDMLKKETFTPKTNNVVQQK
HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHH
KDASTQTENIVQQKRDASSQTGSNIVISDTKKVIETTQSHR
HHCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA