Definition Neorickettsia sennetsu str. Miyayama chromosome, complete genome.
Accession NC_007798
Length 859,006

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The map label for this gene is 88608694

Identifier: 88608694

GI number: 88608694

Start: 530071

End: 532332

Strand: Direct

Name: 88608694

Synonym: NSE_0607

Alternate gene names: NA

Gene position: 530071-532332 (Clockwise)

Preceding gene: 88608515

Following gene: 88608047

Centisome position: 61.71

GC content: 49.25

Gene sequence:

>2262_bases
ATGCTCCCACTTCGTTATGCACCTTTTATAACTCACGATGTCGTCTCCGCAATTGAGGCAATAGGAAAACTGGGCTCTAT
CATAGTTCAAGGTACACAACAACAGGGAGCATCTCACAAGGAAAGGAAAACGCTGCTCGCTGCGGCACTCGATGTCTTCA
CTATTTTCGGGAATGAACAGGCTAGACTCAAAGAGATAGATGCTCCTGACAAGCAGGATGTTATTAAATGTCGTGACAAA
ATTCTTCGGTGTGCGGAAAGGGTTATAAAGTATGTAGACACAGATGGACACAACGACACCGCTATTCCACGTGACAAGGG
ACTAAAAGCAGCAGGTGGCCTGGCAAAAGCCTGCAAAGCTCTCTCAGGGCTCTTGGGGAGTGCTGCTCCTAATTTACCCG
CTTCAGCATCTCGTGTATTAAGCGCACTACTCGATCAATATGCAGACAATATGCTATCGGCTACAGGGGCAACAGAACCT
GGCGGGTTGGCGCAAGCAGCACAGTCTGCTGCAGCTTCTGCCCGTAGGGGAATTGAGGCAACTTATTCAGGTCAATTTGC
ATTTGCCCTAGAGGAAGAAATAACAGGTGTTCCAGGTGTAAAACCCCAAGAAGGCAAGGGTTTCGAAGTGGAAAGAGAGA
AGCTCTGCAGTCTAATCCAGCTGGTTGCAGCTGCAACAGGTAGCACGTTATCTAGTACTATTCAGGCTGCATGCGTAGAC
CCAAACCAAGCACAAACCGCTGAAGTGTCAACAGGAGTGCTAACAGAAGAAGCAGAACATACAGAACCAGGGGAAGAGGA
AGAACTTTTGTCTGATGTGACAGAAGATTCCATTAGTACGGATCCAGAGATGCCTCCACTTGAAGGGTCTGAGGAAGACA
TTTCTGTAGGCGGCGAGGGACCTGCAGGAGCCCAAGCAGCTGCACCAGCAGCCCCAGATACTCCGCAGCAAGAGCCAGAA
CCATCTCCAGAATCTTCAACATCTGAGGATCTCGAGGTAGAAGAAATATTCTCCTCTGCAGAACAAGAATTTGCGCCGGA
AGAAAGAGGAACAGGACATGACTCAGGAGAAGAGAAAGAGTCTGCAGAAAAAAAGAAAAAATCTACTTCAAAACGTACAC
CACTTCCTCCGGAAGAAAGTAGAGAAGAGGAAAAACAAGACAAAACACAGCGACAAGAACCTGGCACTTTAAATACATTG
TTCCAAAGGTTTCTTATCTTAGTCCAGGGTGTTCTAGAGACCTTGAGTTCGATGATAGGGGCACCCTTCGAGAGCCGTAG
TTTCAGGGAAATCTTTCAAAGCAGGCGTGCACATGACGGAGCTGACGGGCTACAGAAACGTAGTACTTCTGAGCAAGGTT
TAAGCTCTCCTGATGTGGAACAAGGACAAGAAGGCGCACGCCCACGTAGGTATTCTGATCCGGGTCTAGCCATTCAAGAT
ATGTACCGACTGCGTGGAGGGGAAGTACGTGATGCTGCTACACAAACACCTCTGGAGCAACAGGATCATGCTGCAGGGAG
TGGTGTAGCACCTGTTAAACCACCTAGGACGTTCGAGCATGAAAGCGGGAGAGATACACCGTCCACTGCTGGTCATGGTC
GCAAAATACTTACACCAAAAATGCAAGCACTGCGTGAAACTTTAGAAAGAACACTAGGAGATGGAAGTCCAAGCACACCT
ACTAAAAAAACGGGAACTGCCACACAAACTACAACTACGGGAAGTAGGCACCCCTCCGGGAGTGAGCAGTCAGCAGTTGC
ATCAACTACAAAGAGTCCAGATGATAAACCTCTCCCTCCTCCAGCACCACCATTACCTGAACCACCCGCTAAAGCAGCAC
CTAAGGCAGTTGCACCTAGTGGACCAAAGAAGGCGGGGCCTAAGCCTCCATCACCTGCTGAAGCTATGTTAAGCGAGCTG
TCAGCACGACTTCAATCAGGAGGTGGACTAAAACCATCAAGAGATCGTACTCCTTCAGCTAAGGCAGTTGAAAAAAGTAA
GACAGAACCTACCCCACGAGAAGCGATGATGGCGCAGCTTAAAGGTGTACTCGAACAGAGGGAGTCTCAGGCAACTTCCG
GAGACGCTAAAGTAGATCCTAGATCTCCTTCACCAAAGCCGGAAGATATCCCAATGGGGCAACTAACTGAAGCGGCCGTG
GGTTTGCAAGGCGTCCAATCACAGGGAACAGTGCCAGAAGGCTCAGTCAAAGGGCCTGGAGCTGGAGGAGCTGATCAAAA
GCCCGAAGCACCTCAACGCTGA

Upstream 100 bases:

>100_bases
ACATTCAAATAAATTAGTAAATATCCGTATTGGGATATTACATCTTTTGTTAAGAGTTTTATCTTAATCTGTTAGGAAAT
TTACTATATCTGAATGTAGA

Downstream 100 bases:

>100_bases
TTTTGGATGCATTGGAGGCGAGTTATTCGCCTCCAATAACTGGTGTGGCACATGACCACACACACGTTGTCTACCCCATA
AACAATACAGATTCGCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 753; Mature: 753

Protein sequence:

>753_residues
MLPLRYAPFITHDVVSAIEAIGKLGSIIVQGTQQQGASHKERKTLLAAALDVFTIFGNEQARLKEIDAPDKQDVIKCRDK
ILRCAERVIKYVDTDGHNDTAIPRDKGLKAAGGLAKACKALSGLLGSAAPNLPASASRVLSALLDQYADNMLSATGATEP
GGLAQAAQSAAASARRGIEATYSGQFAFALEEEITGVPGVKPQEGKGFEVEREKLCSLIQLVAAATGSTLSSTIQAACVD
PNQAQTAEVSTGVLTEEAEHTEPGEEEELLSDVTEDSISTDPEMPPLEGSEEDISVGGEGPAGAQAAAPAAPDTPQQEPE
PSPESSTSEDLEVEEIFSSAEQEFAPEERGTGHDSGEEKESAEKKKKSTSKRTPLPPEESREEEKQDKTQRQEPGTLNTL
FQRFLILVQGVLETLSSMIGAPFESRSFREIFQSRRAHDGADGLQKRSTSEQGLSSPDVEQGQEGARPRRYSDPGLAIQD
MYRLRGGEVRDAATQTPLEQQDHAAGSGVAPVKPPRTFEHESGRDTPSTAGHGRKILTPKMQALRETLERTLGDGSPSTP
TKKTGTATQTTTTGSRHPSGSEQSAVASTTKSPDDKPLPPPAPPLPEPPAKAAPKAVAPSGPKKAGPKPPSPAEAMLSEL
SARLQSGGGLKPSRDRTPSAKAVEKSKTEPTPREAMMAQLKGVLEQRESQATSGDAKVDPRSPSPKPEDIPMGQLTEAAV
GLQGVQSQGTVPEGSVKGPGAGGADQKPEAPQR

Sequences:

>Translated_753_residues
MLPLRYAPFITHDVVSAIEAIGKLGSIIVQGTQQQGASHKERKTLLAAALDVFTIFGNEQARLKEIDAPDKQDVIKCRDK
ILRCAERVIKYVDTDGHNDTAIPRDKGLKAAGGLAKACKALSGLLGSAAPNLPASASRVLSALLDQYADNMLSATGATEP
GGLAQAAQSAAASARRGIEATYSGQFAFALEEEITGVPGVKPQEGKGFEVEREKLCSLIQLVAAATGSTLSSTIQAACVD
PNQAQTAEVSTGVLTEEAEHTEPGEEEELLSDVTEDSISTDPEMPPLEGSEEDISVGGEGPAGAQAAAPAAPDTPQQEPE
PSPESSTSEDLEVEEIFSSAEQEFAPEERGTGHDSGEEKESAEKKKKSTSKRTPLPPEESREEEKQDKTQRQEPGTLNTL
FQRFLILVQGVLETLSSMIGAPFESRSFREIFQSRRAHDGADGLQKRSTSEQGLSSPDVEQGQEGARPRRYSDPGLAIQD
MYRLRGGEVRDAATQTPLEQQDHAAGSGVAPVKPPRTFEHESGRDTPSTAGHGRKILTPKMQALRETLERTLGDGSPSTP
TKKTGTATQTTTTGSRHPSGSEQSAVASTTKSPDDKPLPPPAPPLPEPPAKAAPKAVAPSGPKKAGPKPPSPAEAMLSEL
SARLQSGGGLKPSRDRTPSAKAVEKSKTEPTPREAMMAQLKGVLEQRESQATSGDAKVDPRSPSPKPEDIPMGQLTEAAV
GLQGVQSQGTVPEGSVKGPGAGGADQKPEAPQR
>Mature_753_residues
MLPLRYAPFITHDVVSAIEAIGKLGSIIVQGTQQQGASHKERKTLLAAALDVFTIFGNEQARLKEIDAPDKQDVIKCRDK
ILRCAERVIKYVDTDGHNDTAIPRDKGLKAAGGLAKACKALSGLLGSAAPNLPASASRVLSALLDQYADNMLSATGATEP
GGLAQAAQSAAASARRGIEATYSGQFAFALEEEITGVPGVKPQEGKGFEVEREKLCSLIQLVAAATGSTLSSTIQAACVD
PNQAQTAEVSTGVLTEEAEHTEPGEEEELLSDVTEDSISTDPEMPPLEGSEEDISVGGEGPAGAQAAAPAAPDTPQQEPE
PSPESSTSEDLEVEEIFSSAEQEFAPEERGTGHDSGEEKESAEKKKKSTSKRTPLPPEESREEEKQDKTQRQEPGTLNTL
FQRFLILVQGVLETLSSMIGAPFESRSFREIFQSRRAHDGADGLQKRSTSEQGLSSPDVEQGQEGARPRRYSDPGLAIQD
MYRLRGGEVRDAATQTPLEQQDHAAGSGVAPVKPPRTFEHESGRDTPSTAGHGRKILTPKMQALRETLERTLGDGSPSTP
TKKTGTATQTTTTGSRHPSGSEQSAVASTTKSPDDKPLPPPAPPLPEPPAKAAPKAVAPSGPKKAGPKPPSPAEAMLSEL
SARLQSGGGLKPSRDRTPSAKAVEKSKTEPTPREAMMAQLKGVLEQRESQATSGDAKVDPRSPSPKPEDIPMGQLTEAAV
GLQGVQSQGTVPEGSVKGPGAGGADQKPEAPQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79221; Mature: 79221

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPLRYAPFITHDVVSAIEAIGKLGSIIVQGTQQQGASHKERKTLLAAALDVFTIFGNEQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCH
ARLKEIDAPDKQDVIKCRDKILRCAERVIKYVDTDGHNDTAIPRDKGLKAAGGLAKACKA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHCHHHHHHHH
LSGLLGSAAPNLPASASRVLSALLDQYADNMLSATGATEPGGLAQAAQSAAASARRGIEA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCE
TYSGQFAFALEEEITGVPGVKPQEGKGFEVEREKLCSLIQLVAAATGSTLSSTIQAACVD
EECCCEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
PNQAQTAEVSTGVLTEEAEHTEPGEEEELLSDVTEDSISTDPEMPPLEGSEEDISVGGEG
CCCCCHHHHHHCHHHCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PAGAQAAAPAAPDTPQQEPEPSPESSTSEDLEVEEIFSSAEQEFAPEERGTGHDSGEEKE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCHHHH
SAEKKKKSTSKRTPLPPEESREEEKQDKTQRQEPGTLNTLFQRFLILVQGVLETLSSMIG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
APFESRSFREIFQSRRAHDGADGLQKRSTSEQGLSSPDVEQGQEGARPRRYSDPGLAIQD
CCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHH
MYRLRGGEVRDAATQTPLEQQDHAAGSGVAPVKPPRTFEHESGRDTPSTAGHGRKILTPK
HHHHCCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHH
MQALRETLERTLGDGSPSTPTKKTGTATQTTTTGSRHPSGSEQSAVASTTKSPDDKPLPP
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC
PAPPLPEPPAKAAPKAVAPSGPKKAGPKPPSPAEAMLSELSARLQSGGGLKPSRDRTPSA
CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
KAVEKSKTEPTPREAMMAQLKGVLEQRESQATSGDAKVDPRSPSPKPEDIPMGQLTEAAV
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
GLQGVQSQGTVPEGSVKGPGAGGADQKPEAPQR
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLPLRYAPFITHDVVSAIEAIGKLGSIIVQGTQQQGASHKERKTLLAAALDVFTIFGNEQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCH
ARLKEIDAPDKQDVIKCRDKILRCAERVIKYVDTDGHNDTAIPRDKGLKAAGGLAKACKA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHCHHHHHHHH
LSGLLGSAAPNLPASASRVLSALLDQYADNMLSATGATEPGGLAQAAQSAAASARRGIEA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCE
TYSGQFAFALEEEITGVPGVKPQEGKGFEVEREKLCSLIQLVAAATGSTLSSTIQAACVD
EECCCEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
PNQAQTAEVSTGVLTEEAEHTEPGEEEELLSDVTEDSISTDPEMPPLEGSEEDISVGGEG
CCCCCHHHHHHCHHHCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PAGAQAAAPAAPDTPQQEPEPSPESSTSEDLEVEEIFSSAEQEFAPEERGTGHDSGEEKE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCHHHH
SAEKKKKSTSKRTPLPPEESREEEKQDKTQRQEPGTLNTLFQRFLILVQGVLETLSSMIG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
APFESRSFREIFQSRRAHDGADGLQKRSTSEQGLSSPDVEQGQEGARPRRYSDPGLAIQD
CCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHH
MYRLRGGEVRDAATQTPLEQQDHAAGSGVAPVKPPRTFEHESGRDTPSTAGHGRKILTPK
HHHHCCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHH
MQALRETLERTLGDGSPSTPTKKTGTATQTTTTGSRHPSGSEQSAVASTTKSPDDKPLPP
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC
PAPPLPEPPAKAAPKAVAPSGPKKAGPKPPSPAEAMLSELSARLQSGGGLKPSRDRTPSA
CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
KAVEKSKTEPTPREAMMAQLKGVLEQRESQATSGDAKVDPRSPSPKPEDIPMGQLTEAAV
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
GLQGVQSQGTVPEGSVKGPGAGGADQKPEAPQR
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA