| Definition | Neorickettsia sennetsu str. Miyayama chromosome, complete genome. |
|---|---|
| Accession | NC_007798 |
| Length | 859,006 |
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The map label for this gene is 88608694
Identifier: 88608694
GI number: 88608694
Start: 530071
End: 532332
Strand: Direct
Name: 88608694
Synonym: NSE_0607
Alternate gene names: NA
Gene position: 530071-532332 (Clockwise)
Preceding gene: 88608515
Following gene: 88608047
Centisome position: 61.71
GC content: 49.25
Gene sequence:
>2262_bases ATGCTCCCACTTCGTTATGCACCTTTTATAACTCACGATGTCGTCTCCGCAATTGAGGCAATAGGAAAACTGGGCTCTAT CATAGTTCAAGGTACACAACAACAGGGAGCATCTCACAAGGAAAGGAAAACGCTGCTCGCTGCGGCACTCGATGTCTTCA CTATTTTCGGGAATGAACAGGCTAGACTCAAAGAGATAGATGCTCCTGACAAGCAGGATGTTATTAAATGTCGTGACAAA ATTCTTCGGTGTGCGGAAAGGGTTATAAAGTATGTAGACACAGATGGACACAACGACACCGCTATTCCACGTGACAAGGG ACTAAAAGCAGCAGGTGGCCTGGCAAAAGCCTGCAAAGCTCTCTCAGGGCTCTTGGGGAGTGCTGCTCCTAATTTACCCG CTTCAGCATCTCGTGTATTAAGCGCACTACTCGATCAATATGCAGACAATATGCTATCGGCTACAGGGGCAACAGAACCT GGCGGGTTGGCGCAAGCAGCACAGTCTGCTGCAGCTTCTGCCCGTAGGGGAATTGAGGCAACTTATTCAGGTCAATTTGC ATTTGCCCTAGAGGAAGAAATAACAGGTGTTCCAGGTGTAAAACCCCAAGAAGGCAAGGGTTTCGAAGTGGAAAGAGAGA AGCTCTGCAGTCTAATCCAGCTGGTTGCAGCTGCAACAGGTAGCACGTTATCTAGTACTATTCAGGCTGCATGCGTAGAC CCAAACCAAGCACAAACCGCTGAAGTGTCAACAGGAGTGCTAACAGAAGAAGCAGAACATACAGAACCAGGGGAAGAGGA AGAACTTTTGTCTGATGTGACAGAAGATTCCATTAGTACGGATCCAGAGATGCCTCCACTTGAAGGGTCTGAGGAAGACA TTTCTGTAGGCGGCGAGGGACCTGCAGGAGCCCAAGCAGCTGCACCAGCAGCCCCAGATACTCCGCAGCAAGAGCCAGAA CCATCTCCAGAATCTTCAACATCTGAGGATCTCGAGGTAGAAGAAATATTCTCCTCTGCAGAACAAGAATTTGCGCCGGA AGAAAGAGGAACAGGACATGACTCAGGAGAAGAGAAAGAGTCTGCAGAAAAAAAGAAAAAATCTACTTCAAAACGTACAC CACTTCCTCCGGAAGAAAGTAGAGAAGAGGAAAAACAAGACAAAACACAGCGACAAGAACCTGGCACTTTAAATACATTG TTCCAAAGGTTTCTTATCTTAGTCCAGGGTGTTCTAGAGACCTTGAGTTCGATGATAGGGGCACCCTTCGAGAGCCGTAG TTTCAGGGAAATCTTTCAAAGCAGGCGTGCACATGACGGAGCTGACGGGCTACAGAAACGTAGTACTTCTGAGCAAGGTT TAAGCTCTCCTGATGTGGAACAAGGACAAGAAGGCGCACGCCCACGTAGGTATTCTGATCCGGGTCTAGCCATTCAAGAT ATGTACCGACTGCGTGGAGGGGAAGTACGTGATGCTGCTACACAAACACCTCTGGAGCAACAGGATCATGCTGCAGGGAG TGGTGTAGCACCTGTTAAACCACCTAGGACGTTCGAGCATGAAAGCGGGAGAGATACACCGTCCACTGCTGGTCATGGTC GCAAAATACTTACACCAAAAATGCAAGCACTGCGTGAAACTTTAGAAAGAACACTAGGAGATGGAAGTCCAAGCACACCT ACTAAAAAAACGGGAACTGCCACACAAACTACAACTACGGGAAGTAGGCACCCCTCCGGGAGTGAGCAGTCAGCAGTTGC ATCAACTACAAAGAGTCCAGATGATAAACCTCTCCCTCCTCCAGCACCACCATTACCTGAACCACCCGCTAAAGCAGCAC CTAAGGCAGTTGCACCTAGTGGACCAAAGAAGGCGGGGCCTAAGCCTCCATCACCTGCTGAAGCTATGTTAAGCGAGCTG TCAGCACGACTTCAATCAGGAGGTGGACTAAAACCATCAAGAGATCGTACTCCTTCAGCTAAGGCAGTTGAAAAAAGTAA GACAGAACCTACCCCACGAGAAGCGATGATGGCGCAGCTTAAAGGTGTACTCGAACAGAGGGAGTCTCAGGCAACTTCCG GAGACGCTAAAGTAGATCCTAGATCTCCTTCACCAAAGCCGGAAGATATCCCAATGGGGCAACTAACTGAAGCGGCCGTG GGTTTGCAAGGCGTCCAATCACAGGGAACAGTGCCAGAAGGCTCAGTCAAAGGGCCTGGAGCTGGAGGAGCTGATCAAAA GCCCGAAGCACCTCAACGCTGA
Upstream 100 bases:
>100_bases ACATTCAAATAAATTAGTAAATATCCGTATTGGGATATTACATCTTTTGTTAAGAGTTTTATCTTAATCTGTTAGGAAAT TTACTATATCTGAATGTAGA
Downstream 100 bases:
>100_bases TTTTGGATGCATTGGAGGCGAGTTATTCGCCTCCAATAACTGGTGTGGCACATGACCACACACACGTTGTCTACCCCATA AACAATACAGATTCGCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 753; Mature: 753
Protein sequence:
>753_residues MLPLRYAPFITHDVVSAIEAIGKLGSIIVQGTQQQGASHKERKTLLAAALDVFTIFGNEQARLKEIDAPDKQDVIKCRDK ILRCAERVIKYVDTDGHNDTAIPRDKGLKAAGGLAKACKALSGLLGSAAPNLPASASRVLSALLDQYADNMLSATGATEP GGLAQAAQSAAASARRGIEATYSGQFAFALEEEITGVPGVKPQEGKGFEVEREKLCSLIQLVAAATGSTLSSTIQAACVD PNQAQTAEVSTGVLTEEAEHTEPGEEEELLSDVTEDSISTDPEMPPLEGSEEDISVGGEGPAGAQAAAPAAPDTPQQEPE PSPESSTSEDLEVEEIFSSAEQEFAPEERGTGHDSGEEKESAEKKKKSTSKRTPLPPEESREEEKQDKTQRQEPGTLNTL FQRFLILVQGVLETLSSMIGAPFESRSFREIFQSRRAHDGADGLQKRSTSEQGLSSPDVEQGQEGARPRRYSDPGLAIQD MYRLRGGEVRDAATQTPLEQQDHAAGSGVAPVKPPRTFEHESGRDTPSTAGHGRKILTPKMQALRETLERTLGDGSPSTP TKKTGTATQTTTTGSRHPSGSEQSAVASTTKSPDDKPLPPPAPPLPEPPAKAAPKAVAPSGPKKAGPKPPSPAEAMLSEL SARLQSGGGLKPSRDRTPSAKAVEKSKTEPTPREAMMAQLKGVLEQRESQATSGDAKVDPRSPSPKPEDIPMGQLTEAAV GLQGVQSQGTVPEGSVKGPGAGGADQKPEAPQR
Sequences:
>Translated_753_residues MLPLRYAPFITHDVVSAIEAIGKLGSIIVQGTQQQGASHKERKTLLAAALDVFTIFGNEQARLKEIDAPDKQDVIKCRDK ILRCAERVIKYVDTDGHNDTAIPRDKGLKAAGGLAKACKALSGLLGSAAPNLPASASRVLSALLDQYADNMLSATGATEP GGLAQAAQSAAASARRGIEATYSGQFAFALEEEITGVPGVKPQEGKGFEVEREKLCSLIQLVAAATGSTLSSTIQAACVD PNQAQTAEVSTGVLTEEAEHTEPGEEEELLSDVTEDSISTDPEMPPLEGSEEDISVGGEGPAGAQAAAPAAPDTPQQEPE PSPESSTSEDLEVEEIFSSAEQEFAPEERGTGHDSGEEKESAEKKKKSTSKRTPLPPEESREEEKQDKTQRQEPGTLNTL FQRFLILVQGVLETLSSMIGAPFESRSFREIFQSRRAHDGADGLQKRSTSEQGLSSPDVEQGQEGARPRRYSDPGLAIQD MYRLRGGEVRDAATQTPLEQQDHAAGSGVAPVKPPRTFEHESGRDTPSTAGHGRKILTPKMQALRETLERTLGDGSPSTP TKKTGTATQTTTTGSRHPSGSEQSAVASTTKSPDDKPLPPPAPPLPEPPAKAAPKAVAPSGPKKAGPKPPSPAEAMLSEL SARLQSGGGLKPSRDRTPSAKAVEKSKTEPTPREAMMAQLKGVLEQRESQATSGDAKVDPRSPSPKPEDIPMGQLTEAAV GLQGVQSQGTVPEGSVKGPGAGGADQKPEAPQR >Mature_753_residues MLPLRYAPFITHDVVSAIEAIGKLGSIIVQGTQQQGASHKERKTLLAAALDVFTIFGNEQARLKEIDAPDKQDVIKCRDK ILRCAERVIKYVDTDGHNDTAIPRDKGLKAAGGLAKACKALSGLLGSAAPNLPASASRVLSALLDQYADNMLSATGATEP GGLAQAAQSAAASARRGIEATYSGQFAFALEEEITGVPGVKPQEGKGFEVEREKLCSLIQLVAAATGSTLSSTIQAACVD PNQAQTAEVSTGVLTEEAEHTEPGEEEELLSDVTEDSISTDPEMPPLEGSEEDISVGGEGPAGAQAAAPAAPDTPQQEPE PSPESSTSEDLEVEEIFSSAEQEFAPEERGTGHDSGEEKESAEKKKKSTSKRTPLPPEESREEEKQDKTQRQEPGTLNTL FQRFLILVQGVLETLSSMIGAPFESRSFREIFQSRRAHDGADGLQKRSTSEQGLSSPDVEQGQEGARPRRYSDPGLAIQD MYRLRGGEVRDAATQTPLEQQDHAAGSGVAPVKPPRTFEHESGRDTPSTAGHGRKILTPKMQALRETLERTLGDGSPSTP TKKTGTATQTTTTGSRHPSGSEQSAVASTTKSPDDKPLPPPAPPLPEPPAKAAPKAVAPSGPKKAGPKPPSPAEAMLSEL SARLQSGGGLKPSRDRTPSAKAVEKSKTEPTPREAMMAQLKGVLEQRESQATSGDAKVDPRSPSPKPEDIPMGQLTEAAV GLQGVQSQGTVPEGSVKGPGAGGADQKPEAPQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79221; Mature: 79221
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLRYAPFITHDVVSAIEAIGKLGSIIVQGTQQQGASHKERKTLLAAALDVFTIFGNEQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCH ARLKEIDAPDKQDVIKCRDKILRCAERVIKYVDTDGHNDTAIPRDKGLKAAGGLAKACKA HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHCHHHHHHHH LSGLLGSAAPNLPASASRVLSALLDQYADNMLSATGATEPGGLAQAAQSAAASARRGIEA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCE TYSGQFAFALEEEITGVPGVKPQEGKGFEVEREKLCSLIQLVAAATGSTLSSTIQAACVD EECCCEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC PNQAQTAEVSTGVLTEEAEHTEPGEEEELLSDVTEDSISTDPEMPPLEGSEEDISVGGEG CCCCCHHHHHHCHHHCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PAGAQAAAPAAPDTPQQEPEPSPESSTSEDLEVEEIFSSAEQEFAPEERGTGHDSGEEKE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCHHHH SAEKKKKSTSKRTPLPPEESREEEKQDKTQRQEPGTLNTLFQRFLILVQGVLETLSSMIG HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC APFESRSFREIFQSRRAHDGADGLQKRSTSEQGLSSPDVEQGQEGARPRRYSDPGLAIQD CCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHH MYRLRGGEVRDAATQTPLEQQDHAAGSGVAPVKPPRTFEHESGRDTPSTAGHGRKILTPK HHHHCCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHH MQALRETLERTLGDGSPSTPTKKTGTATQTTTTGSRHPSGSEQSAVASTTKSPDDKPLPP HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC PAPPLPEPPAKAAPKAVAPSGPKKAGPKPPSPAEAMLSELSARLQSGGGLKPSRDRTPSA CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCH KAVEKSKTEPTPREAMMAQLKGVLEQRESQATSGDAKVDPRSPSPKPEDIPMGQLTEAAV HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH GLQGVQSQGTVPEGSVKGPGAGGADQKPEAPQR HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLPLRYAPFITHDVVSAIEAIGKLGSIIVQGTQQQGASHKERKTLLAAALDVFTIFGNEQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCH ARLKEIDAPDKQDVIKCRDKILRCAERVIKYVDTDGHNDTAIPRDKGLKAAGGLAKACKA HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHCHHHHHHHH LSGLLGSAAPNLPASASRVLSALLDQYADNMLSATGATEPGGLAQAAQSAAASARRGIEA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCE TYSGQFAFALEEEITGVPGVKPQEGKGFEVEREKLCSLIQLVAAATGSTLSSTIQAACVD EECCCEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC PNQAQTAEVSTGVLTEEAEHTEPGEEEELLSDVTEDSISTDPEMPPLEGSEEDISVGGEG CCCCCHHHHHHCHHHCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PAGAQAAAPAAPDTPQQEPEPSPESSTSEDLEVEEIFSSAEQEFAPEERGTGHDSGEEKE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCHHHH SAEKKKKSTSKRTPLPPEESREEEKQDKTQRQEPGTLNTLFQRFLILVQGVLETLSSMIG HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC APFESRSFREIFQSRRAHDGADGLQKRSTSEQGLSSPDVEQGQEGARPRRYSDPGLAIQD CCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHH MYRLRGGEVRDAATQTPLEQQDHAAGSGVAPVKPPRTFEHESGRDTPSTAGHGRKILTPK HHHHCCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHH MQALRETLERTLGDGSPSTPTKKTGTATQTTTTGSRHPSGSEQSAVASTTKSPDDKPLPP HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC PAPPLPEPPAKAAPKAVAPSGPKKAGPKPPSPAEAMLSELSARLQSGGGLKPSRDRTPSA CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCH KAVEKSKTEPTPREAMMAQLKGVLEQRESQATSGDAKVDPRSPSPKPEDIPMGQLTEAAV HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH GLQGVQSQGTVPEGSVKGPGAGGADQKPEAPQR HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA