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The map label for this gene is yfkH [H]

Identifier: 88608339

GI number: 88608339

Start: 322213

End: 323052

Strand: Reverse

Name: yfkH [H]

Synonym: NSE_0395

Alternate gene names: 88608339

Gene position: 323052-322213 (Counterclockwise)

Preceding gene: 88608667

Following gene: 88608661

Centisome position: 37.61

GC content: 39.29

Gene sequence:

>840_bases
ATGAAGCGAACTTTTGCAGTACTAAAAATCTCGTTGTACAACATGTTGTATCATGGTGGCTCAGAGTATGCGGGATACCT
GTCTTTTTTGCTGCTTCTATCGATTTTTCCATTTCTATTTTTCTTCACTGCTGTAGCGGGCTACACAGCAAACATAGTAG
GAGCTTCTTCATATGAGATAACAAGAAAATTGCTGTCGGTTTTCATAGAGAACGTACCAGAGAACATCATCGAAGGCATA
ATGCCATATATCAAGGAGATTCTTGAGGGTCCTACACATGGTCTTCTGACGCTTACCATTCTTGGTGCAATATGGACGGC
CTCCTCCATTGTGGAAGGATTAAAGGCAGCAGTAAACAAAGCATACAATTTTGGAACTGAAACTCTGGTTTCAGAGTACA
TACTAAGGCGTTTTGTAAGCGTCATACAATTCCTTTTGATTTCCATTATCATACTTATTTTTCTTCTCTTCCCAACGGTA
TATCCGCTCTTAACAAAGAATGTATCTTTTCTTCATTTACTAAAAAGACCAAGTTGGTTACCTTACAGCACCGTGACAAC
CTGCTGTATCTTCTGTTTTGTATCGGCCCTGTATATTTTCTTCCCAAAGGAAAAGCAAAAGTTCACTGATGTTGTTCCTG
GAAGTATAATGGTGGTCTCTCTGTGGATTCTTACCTCGATTGCGTTTTCGTTCTACTTACATTCTTTCGCCCAGATGAAC
ATAATTTACGGGAGCATTGCAGGGATAATCGTGGTTATGTTGTATTTTTACTTGCTCAACCTGTGTTTCATATACGGGGC
AGAGATCAATGCTTTAAATAAACGAATTAGCCAGAAATAG

Upstream 100 bases:

>100_bases
CAGCTCTCACAATCGGATGTTCTTTCACAATTATAGAAATGTCAAATAATATGGCTAGTATTGATACTTATCGCTTGCGA
AATTACAAAGCTCATAAAAA

Downstream 100 bases:

>100_bases
AAAAGCTCCATTCTCAAATGAAACAATCCTACCTGATGCATATCAGGGTGGTCTTTTCGCTTGCACTTTGGTTTTAATAA
ACGAACGATGCAGCAACCCG

Product: YihY family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKRTFAVLKISLYNMLYHGGSEYAGYLSFLLLLSIFPFLFFFTAVAGYTANIVGASSYEITRKLLSVFIENVPENIIEGI
MPYIKEILEGPTHGLLTLTILGAIWTASSIVEGLKAAVNKAYNFGTETLVSEYILRRFVSVIQFLLISIIILIFLLFPTV
YPLLTKNVSFLHLLKRPSWLPYSTVTTCCIFCFVSALYIFFPKEKQKFTDVVPGSIMVVSLWILTSIAFSFYLHSFAQMN
IIYGSIAGIIVVMLYFYLLNLCFIYGAEINALNKRISQK

Sequences:

>Translated_279_residues
MKRTFAVLKISLYNMLYHGGSEYAGYLSFLLLLSIFPFLFFFTAVAGYTANIVGASSYEITRKLLSVFIENVPENIIEGI
MPYIKEILEGPTHGLLTLTILGAIWTASSIVEGLKAAVNKAYNFGTETLVSEYILRRFVSVIQFLLISIIILIFLLFPTV
YPLLTKNVSFLHLLKRPSWLPYSTVTTCCIFCFVSALYIFFPKEKQKFTDVVPGSIMVVSLWILTSIAFSFYLHSFAQMN
IIYGSIAGIIVVMLYFYLLNLCFIYGAEINALNKRISQK
>Mature_279_residues
MKRTFAVLKISLYNMLYHGGSEYAGYLSFLLLLSIFPFLFFFTAVAGYTANIVGASSYEITRKLLSVFIENVPENIIEGI
MPYIKEILEGPTHGLLTLTILGAIWTASSIVEGLKAAVNKAYNFGTETLVSEYILRRFVSVIQFLLISIIILIFLLFPTV
YPLLTKNVSFLHLLKRPSWLPYSTVTTCCIFCFVSALYIFFPKEKQKFTDVVPGSIMVVSLWILTSIAFSFYLHSFAQMN
IIYGSIAGIIVVMLYFYLLNLCFIYGAEINALNKRISQK

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 31554; Mature: 31554

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]