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The map label for this gene is 88608309

Identifier: 88608309

GI number: 88608309

Start: 584986

End: 585708

Strand: Reverse

Name: 88608309

Synonym: NSE_0668

Alternate gene names: NA

Gene position: 585708-584986 (Counterclockwise)

Preceding gene: 88608560

Following gene: 88608239

Centisome position: 68.18

GC content: 41.49

Gene sequence:

>723_bases
GTGGATGCGTCCCATTATTATCTTTTACTGGAGATATATGCCCTTCTGCTTGAGAAGATAAGTGGTAGCTTCAGTGACGT
GCTCAATTTTGGTGCCCACAGGGGAGAACTTCTTGTCAGTTTGAAAGAATTTGAGGATCTTTCTTTTGCAAATGTTGTTC
ACCTGGACGTGTGTCACGAAATGCTAGCGTCCGTATCTGGTAAGAAAATTGTCGTCGAAGATGATAGTTTTGAGCTTGGG
GAGAATAATTTTGATCTTGTCATAAGTGGCATGTTTATGCACCATGTGAACGATTTGATAGGCGCCTTTTCAGCTATATA
CAGGTCTTTGAAGGTTGGGGGTATGTGTCTTGTTAGTCTTTTTGGTCCTGAGACATTGATAGAACTCAAACAAGCTATCT
TCAATGCAGAGGGTGGGGATGGTTTTGTGCCTAGAGTTTCTCCTTTTATTCACATTAAGGATGCAGGAAGACTTATACAA
AGAGCTGGGTTTGTGCTTCCCATTGTGACAAGTGAAAAAGTAGTCGTCGAATACTCGAGTGTATATAAGCTTTTCACTGA
CATACATGCTACTGCGCAAAGTAGTGCAATCTCAGGGATCAATTATGGTATGACTACCATGGGCACTCTCAAGAGAATCA
TAACGGAATATGAGAGACTTTGTCTTGATGGAATCAAAGCCACATTTGAAGTACTAGTGCTTGTCGCAATGAAAGGTGCC
TGA

Upstream 100 bases:

>100_bases
GTAAGAAAACCTATAAAATCTTGGGTGTGGAATTTAGACAAAGTTGAAGCGTCTCTTCGATACAAGAGCTATAATTGCTC
GCAGGAAGCGTTTTGCGGGG

Downstream 100 bases:

>100_bases
ATGTCTGCTTTCATTACTTGCCCTGTTACAGGTGTGGGTCATACGGGTGATCTAATCAAAATAGGACACAATGTGTTAGG
ATAGTGCAGAAATAGATAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MDASHYYLLLEIYALLLEKISGSFSDVLNFGAHRGELLVSLKEFEDLSFANVVHLDVCHEMLASVSGKKIVVEDDSFELG
ENNFDLVISGMFMHHVNDLIGAFSAIYRSLKVGGMCLVSLFGPETLIELKQAIFNAEGGDGFVPRVSPFIHIKDAGRLIQ
RAGFVLPIVTSEKVVVEYSSVYKLFTDIHATAQSSAISGINYGMTTMGTLKRIITEYERLCLDGIKATFEVLVLVAMKGA

Sequences:

>Translated_240_residues
MDASHYYLLLEIYALLLEKISGSFSDVLNFGAHRGELLVSLKEFEDLSFANVVHLDVCHEMLASVSGKKIVVEDDSFELG
ENNFDLVISGMFMHHVNDLIGAFSAIYRSLKVGGMCLVSLFGPETLIELKQAIFNAEGGDGFVPRVSPFIHIKDAGRLIQ
RAGFVLPIVTSEKVVVEYSSVYKLFTDIHATAQSSAISGINYGMTTMGTLKRIITEYERLCLDGIKATFEVLVLVAMKGA
>Mature_240_residues
MDASHYYLLLEIYALLLEKISGSFSDVLNFGAHRGELLVSLKEFEDLSFANVVHLDVCHEMLASVSGKKIVVEDDSFELG
ENNFDLVISGMFMHHVNDLIGAFSAIYRSLKVGGMCLVSLFGPETLIELKQAIFNAEGGDGFVPRVSPFIHIKDAGRLIQ
RAGFVLPIVTSEKVVVEYSSVYKLFTDIHATAQSSAISGINYGMTTMGTLKRIITEYERLCLDGIKATFEVLVLVAMKGA

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI40018642, Length=244, Percent_Identity=27.8688524590164, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI86792933, Length=240, Percent_Identity=25.4166666666667, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI19922210, Length=194, Percent_Identity=33.5051546391753, Blast_Score=106, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 26366; Mature: 26366

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDASHYYLLLEIYALLLEKISGSFSDVLNFGAHRGELLVSLKEFEDLSFANVVHLDVCHE
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHEEEHHHHCCCCHHHHHHHHHHHH
MLASVSGKKIVVEDDSFELGENNFDLVISGMFMHHVNDLIGAFSAIYRSLKVGGMCLVSL
HHHCCCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC
FGPETLIELKQAIFNAEGGDGFVPRVSPFIHIKDAGRLIQRAGFVLPIVTSEKVVVEYSS
CCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEECCCEEEEHHHH
VYKLFTDIHATAQSSAISGINYGMTTMGTLKRIITEYERLCLDGIKATFEVLVLVAMKGA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDASHYYLLLEIYALLLEKISGSFSDVLNFGAHRGELLVSLKEFEDLSFANVVHLDVCHE
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHEEEHHHHCCCCHHHHHHHHHHHH
MLASVSGKKIVVEDDSFELGENNFDLVISGMFMHHVNDLIGAFSAIYRSLKVGGMCLVSL
HHHCCCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC
FGPETLIELKQAIFNAEGGDGFVPRVSPFIHIKDAGRLIQRAGFVLPIVTSEKVVVEYSS
CCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEECCCEEEEHHHH
VYKLFTDIHATAQSSAISGINYGMTTMGTLKRIITEYERLCLDGIKATFEVLVLVAMKGA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]