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The map label for this gene is 88608168

Identifier: 88608168

GI number: 88608168

Start: 278854

End: 279351

Strand: Reverse

Name: 88608168

Synonym: NSE_0340

Alternate gene names: NA

Gene position: 279351-278854 (Counterclockwise)

Preceding gene: 88608544

Following gene: 88608210

Centisome position: 32.52

GC content: 38.35

Gene sequence:

>498_bases
ATGCACAAGCATCTCCCCTCCTCAGACAGATTGGTCGCGATTTCGCTTCTTGTGCCTTCTTCGCTGGCCCTGCTCCTGGC
TGTAATCTTGCAATATGGATTTCATTATTATCCCTGTACCCTTTGCATATATGAAAGATGGCCTTATTTTATTAGTATGA
TAATAGCCATCGGACTTCTTTTAATGGAAAACGGAAATCGCTTTCTCATCTACTTTGCTGTGGCATCACTTTTTTTAGGC
ACACTGATAACGCTCTACCACATAGGAATAGAGAAGCACATTTTCACCATGGCAGAAAATTGTGCTACCACATACCATGA
TACACTTGATATTGCTAATCTATATGAACAAATTGCCACAAATGAAATAGTACGTTGTGATAATCCACAAAAATTACTTG
GAATACGTTTGACTTATTTAAATCTGTTGTATTCTCTAGGGAGTGCACTTTTGGTAATTTTTGCGTGTATTAAAAATGAA
AGCCGGTCCGCTAATTGA

Upstream 100 bases:

>100_bases
ATCTCCTAGGGTGCAGCAAGAGTATATTATTCAATTCTTTATCAAATTAATAAGCACTTTAGTTTAATATTTGAAATACG
TAATATAGTACACTAGAGCA

Downstream 100 bases:

>100_bases
GAGAATATTAAGAGTAAACCATGCAGGCGAATCAGCTGCTGTGTATATTTACAGAGGCCAATTGCGTGGCCTTAAGAATA
ATCCAGAGAAGAGAGAATTG

Product: DsbB family disulfide bond formation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MHKHLPSSDRLVAISLLVPSSLALLLAVILQYGFHYYPCTLCIYERWPYFISMIIAIGLLLMENGNRFLIYFAVASLFLG
TLITLYHIGIEKHIFTMAENCATTYHDTLDIANLYEQIATNEIVRCDNPQKLLGIRLTYLNLLYSLGSALLVIFACIKNE
SRSAN

Sequences:

>Translated_165_residues
MHKHLPSSDRLVAISLLVPSSLALLLAVILQYGFHYYPCTLCIYERWPYFISMIIAIGLLLMENGNRFLIYFAVASLFLG
TLITLYHIGIEKHIFTMAENCATTYHDTLDIANLYEQIATNEIVRCDNPQKLLGIRLTYLNLLYSLGSALLVIFACIKNE
SRSAN
>Mature_165_residues
MHKHLPSSDRLVAISLLVPSSLALLLAVILQYGFHYYPCTLCIYERWPYFISMIIAIGLLLMENGNRFLIYFAVASLFLG
TLITLYHIGIEKHIFTMAENCATTYHDTLDIANLYEQIATNEIVRCDNPQKLLGIRLTYLNLLYSLGSALLVIFACIKNE
SRSAN

Specific function: Unknown

COG id: COG1495

COG function: function code O; Disulfide bond formation protein DsbB

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003752 [H]

Pfam domain/function: PF02600 DsbB [H]

EC number: NA

Molecular weight: Translated: 18708; Mature: 18708

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKHLPSSDRLVAISLLVPSSLALLLAVILQYGFHYYPCTLCIYERWPYFISMIIAIGLL
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LMENGNRFLIYFAVASLFLGTLITLYHIGIEKHIFTMAENCATTYHDTLDIANLYEQIAT
HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NEIVRCDNPQKLLGIRLTYLNLLYSLGSALLVIFACIKNESRSAN
CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHKHLPSSDRLVAISLLVPSSLALLLAVILQYGFHYYPCTLCIYERWPYFISMIIAIGLL
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LMENGNRFLIYFAVASLFLGTLITLYHIGIEKHIFTMAENCATTYHDTLDIANLYEQIAT
HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NEIVRCDNPQKLLGIRLTYLNLLYSLGSALLVIFACIKNESRSAN
CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]