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The map label for this gene is 88608159

Identifier: 88608159

GI number: 88608159

Start: 448388

End: 448681

Strand: Direct

Name: 88608159

Synonym: NSE_0523

Alternate gene names: NA

Gene position: 448388-448681 (Clockwise)

Preceding gene: 88608686

Following gene: 88608061

Centisome position: 52.2

GC content: 38.44

Gene sequence:

>294_bases
ATGAATCCGATAAAGAAGTTACGGGTTGAATCTTTGCTTAGAAGAAAAATAACTGAGATTATTAATAAAACCTTTGGCCC
GGTGGCTGCAGTATCGAATGTGGAAATAACAGACAATTCTAGATTTGCGACGGTATCACTCCAATTATTCAATGGTGCCC
CAGAACCACATGAAGTAGAAAACAGTATAAAAGCAAAAATAGGAAAATATCTTGAGATGCGCAACACACCAAGGCTGCAT
TTTATCAGCGTAAGAACATGCCTCGATGCTTTACAACCTGCATCTCAAGAATGA

Upstream 100 bases:

>100_bases
GTTACGAATGCGGGATCCTGCTTAATGGATATAACGAGATCAAGGTTGGTGACATCTTGGAGTCGTTTGGGCTGCTTTCA
AATGAGGAATAGAAGCTTAT

Downstream 100 bases:

>100_bases
CATCTATGACACGATAGTCAGTTATCTTTTCTCAAGGGACAATACTCCGAGTGATTTTTCGCGCTGCCTAGTATTGACAC
CGAATCACTTATTCTCCTAT

Product: putative ribosome-binding factor A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MNPIKKLRVESLLRRKITEIINKTFGPVAAVSNVEITDNSRFATVSLQLFNGAPEPHEVENSIKAKIGKYLEMRNTPRLH
FISVRTCLDALQPASQE

Sequences:

>Translated_97_residues
MNPIKKLRVESLLRRKITEIINKTFGPVAAVSNVEITDNSRFATVSLQLFNGAPEPHEVENSIKAKIGKYLEMRNTPRLH
FISVRTCLDALQPASQE
>Mature_97_residues
MNPIKKLRVESLLRRKITEIINKTFGPVAAVSNVEITDNSRFATVSLQLFNGAPEPHEVENSIKAKIGKYLEMRNTPRLH
FISVRTCLDALQPASQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10932; Mature: 10932

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPIKKLRVESLLRRKITEIINKTFGPVAAVSNVEITDNSRFATVSLQLFNGAPEPHEVE
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEECCCCEEEEEEEEEECCCCCCHHHH
NSIKAKIGKYLEMRNTPRLHFISVRTCLDALQPASQE
HHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNPIKKLRVESLLRRKITEIINKTFGPVAAVSNVEITDNSRFATVSLQLFNGAPEPHEVE
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEECCCCEEEEEEEEEECCCCCCHHHH
NSIKAKIGKYLEMRNTPRLHFISVRTCLDALQPASQE
HHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA