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The map label for this gene is 88608061

Identifier: 88608061

GI number: 88608061

Start: 448653

End: 450992

Strand: Direct

Name: 88608061

Synonym: NSE_0524

Alternate gene names: NA

Gene position: 448653-450992 (Clockwise)

Preceding gene: 88608159

Following gene: 88608173

Centisome position: 52.23

GC content: 35.56

Gene sequence:

>2340_bases
ATGCTTTACAACCTGCATCTCAAGAATGACATCTATGACACGATAGTCAGTTATCTTTTCTCAAGGGACAATACTCCGAG
TGATTTTTCGCGCTGCCTAGTATTGACACCGAATCACTTATTCTCCTATTCACTAAAGAAATCTTTCAGTAAACCATGCA
TTTTGCCTAAAATTGTTAGTATTGATGCTATCCTTCAAGACTTTGCTATCAAAAATGGATATTTCAACTACCTAAATTTT
AGCAAGAAGGCTGTTCTAATGCTGTACAATCTAATGAAGGATGAGAAACACTGCTCAATAAAGGAGGCTATGCGCATTTT
CACTAACCTTCAGCAAGGTAAGATGGAACATGACAATTTCATTCACAGCGAAATCTATAAAAAGTTCACTTATCATCGCG
AATACAATGAGTTTAAAAAGCTCGCATTAGGTCTGATCTTTCGGGATTATGAAGAGGTGATAGTCGCAGGGATATATATT
ACTGATGAAACTTCCAGATATATTTACGAAAAAGCGTTAGCAAATAATTGTCCAATTTTTGTTTATGGTCTAGAGCTAAC
CTATGACGCTGCACCAGAACACTTCCTATATCAAACCTTGAATTTTCAAAAAGAAAAGAATCTTGAAATTGCATCTTTAA
GAAAAGGCAGAACAATATCACAGCTGAACACTGAGCTGGATCCAAATTTTTTCCCTGAAAAAAAAGAAAACAAGAAAAAA
TTTCAACTCAGATATGACTTACGCTTTTGCGAAGAGAGTAACGAACAGCATATGGTAGAGTCTACTGTAACATATTTAAC
AGATTTCTATCCAGATGTAGCCCTTGTGACAACTAACTATTGCTTAGTTAAAAAGATTGGAGCAAGGCTAAGCAACAAGG
AAAATATCAACCTCATATTCAAGGAAAAATACACAGCCCATCCAGATGGAATTTTTCTCTTAAAACTTCTAGATACGGCA
ATACTTGGTGAAACTGATATCAGCTTTATTGCACTTTTAAAGCATCCGTATATCTACGAACAAAACGCCGAAATCATTGA
TTGCATAGAAGATTCCATTATAAGGACGACGACAAGTAAACAGGTAACACAAGAAGCACAACTTTTCCTGGAAAAAATAA
AGAGGTGGAGCAAAGGCTTTCACCACGCAAAAAACTTTGCCGAGTATCACATCAAGTGGTCAGATGCAATTACAAATCGT
ATCACTTGTGGAGGAAAAAGAGTTCTCGAATTTATCAAGAAATACTCACCAAGATTCACTGATATATATGAATATAGACA
AGTGTTGTCATTTTTTCTAGGAAGACAGTATTTTTATCCATTCACAGATAACAAACGGTTCATTAATGTTTTCTCACCAA
AAGAAGCATCATTCCTGACATATAGAAACGCAATTCTCCTCGATTGCACTGAAGAGGACTTCCAAATAAGGGATCCGTTA
GTGATGTTAAACTTATTTCATATCCTTAGCACAAAAAGAAGTATTGTTATTTTTAACAAAGAGAAACCACTCTCTAGGTT
ACTCTTACAAATTCAGCACTCATGTGTAGGAAACTACGAGATAAAAAAAGAACCAACTCAACCAATAGAAACAGTAGCGG
TTGTAAAAGAGAAACTTTTCGTACCCATCGAAATGCTTCCTAAAAAGCTTTCTCCAACCATGATAGAGTTACTCATCAAT
GATCCTTACAGATTTTATGTACGCTACATATTGGCAATCAAAGAGACAAATTCCGTGGTAGTGAAGCCAGGCCACAAGGA
GTTTGGGTATATAATGCACAAGGTTTTTCAAAGTGCAAGTAAAACTCGCTTTTCTAAAGAAGAATATACAAGAATTTTAG
AAAACGAACTCAAGACATATGCAACGCGGTACCAATATGTAAAAAATTTGTGGCTGCCACGAGGATTAAAGATCCTAGAA
CAATTCGCTACTTTTCACAATCGAAGATTAGAAGAGATCGATATACTAGAAAATGAAAAAGAACTAAGCATTTTTATCGC
AGATGGATTAGAACTTTTTTGTAGATTTGATAGGATAGAATCCTTGAAAGAGGATACGGTAAACATCATAGAATTCAAAA
CCGGTACTATACCAACTTTTAAGGAGATAAGTAGTTTTGTGAAGCCACAACTTCCTCTTCAGGGACTAATATTACAAAAA
AACAGGAACGTGAGATTCAATTCGATGATGTATTGCAAGCCTTCAACTGAGAAAGTGACTGTGAAAAAACTTCAATCGCC
AGAGGAGACAATAGCGGAGATACACAAAAAGTTAACGACGCTAGCACAGATATATCTTTCCGGAGAGTTTGATTTCCTCG
CTAATATAACGAAAAACTAA

Upstream 100 bases:

>100_bases
CCACATGAAGTAGAAAACAGTATAAAAGCAAAAATAGGAAAATATCTTGAGATGCGCAACACACCAAGGCTGCATTTTAT
CAGCGTAAGAACATGCCTCG

Downstream 100 bases:

>100_bases
ATTAGCTAGATATAATCAATGAAACCACTAAGCTAAATTTAATAGAAAGAGAAACCCAATTTAAGAAAAACGCTTCTGAA
ATAAAATTGCTTTAAGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 779; Mature: 779

Protein sequence:

>779_residues
MLYNLHLKNDIYDTIVSYLFSRDNTPSDFSRCLVLTPNHLFSYSLKKSFSKPCILPKIVSIDAILQDFAIKNGYFNYLNF
SKKAVLMLYNLMKDEKHCSIKEAMRIFTNLQQGKMEHDNFIHSEIYKKFTYHREYNEFKKLALGLIFRDYEEVIVAGIYI
TDETSRYIYEKALANNCPIFVYGLELTYDAAPEHFLYQTLNFQKEKNLEIASLRKGRTISQLNTELDPNFFPEKKENKKK
FQLRYDLRFCEESNEQHMVESTVTYLTDFYPDVALVTTNYCLVKKIGARLSNKENINLIFKEKYTAHPDGIFLLKLLDTA
ILGETDISFIALLKHPYIYEQNAEIIDCIEDSIIRTTTSKQVTQEAQLFLEKIKRWSKGFHHAKNFAEYHIKWSDAITNR
ITCGGKRVLEFIKKYSPRFTDIYEYRQVLSFFLGRQYFYPFTDNKRFINVFSPKEASFLTYRNAILLDCTEEDFQIRDPL
VMLNLFHILSTKRSIVIFNKEKPLSRLLLQIQHSCVGNYEIKKEPTQPIETVAVVKEKLFVPIEMLPKKLSPTMIELLIN
DPYRFYVRYILAIKETNSVVVKPGHKEFGYIMHKVFQSASKTRFSKEEYTRILENELKTYATRYQYVKNLWLPRGLKILE
QFATFHNRRLEEIDILENEKELSIFIADGLELFCRFDRIESLKEDTVNIIEFKTGTIPTFKEISSFVKPQLPLQGLILQK
NRNVRFNSMMYCKPSTEKVTVKKLQSPEETIAEIHKKLTTLAQIYLSGEFDFLANITKN

Sequences:

>Translated_779_residues
MLYNLHLKNDIYDTIVSYLFSRDNTPSDFSRCLVLTPNHLFSYSLKKSFSKPCILPKIVSIDAILQDFAIKNGYFNYLNF
SKKAVLMLYNLMKDEKHCSIKEAMRIFTNLQQGKMEHDNFIHSEIYKKFTYHREYNEFKKLALGLIFRDYEEVIVAGIYI
TDETSRYIYEKALANNCPIFVYGLELTYDAAPEHFLYQTLNFQKEKNLEIASLRKGRTISQLNTELDPNFFPEKKENKKK
FQLRYDLRFCEESNEQHMVESTVTYLTDFYPDVALVTTNYCLVKKIGARLSNKENINLIFKEKYTAHPDGIFLLKLLDTA
ILGETDISFIALLKHPYIYEQNAEIIDCIEDSIIRTTTSKQVTQEAQLFLEKIKRWSKGFHHAKNFAEYHIKWSDAITNR
ITCGGKRVLEFIKKYSPRFTDIYEYRQVLSFFLGRQYFYPFTDNKRFINVFSPKEASFLTYRNAILLDCTEEDFQIRDPL
VMLNLFHILSTKRSIVIFNKEKPLSRLLLQIQHSCVGNYEIKKEPTQPIETVAVVKEKLFVPIEMLPKKLSPTMIELLIN
DPYRFYVRYILAIKETNSVVVKPGHKEFGYIMHKVFQSASKTRFSKEEYTRILENELKTYATRYQYVKNLWLPRGLKILE
QFATFHNRRLEEIDILENEKELSIFIADGLELFCRFDRIESLKEDTVNIIEFKTGTIPTFKEISSFVKPQLPLQGLILQK
NRNVRFNSMMYCKPSTEKVTVKKLQSPEETIAEIHKKLTTLAQIYLSGEFDFLANITKN
>Mature_779_residues
MLYNLHLKNDIYDTIVSYLFSRDNTPSDFSRCLVLTPNHLFSYSLKKSFSKPCILPKIVSIDAILQDFAIKNGYFNYLNF
SKKAVLMLYNLMKDEKHCSIKEAMRIFTNLQQGKMEHDNFIHSEIYKKFTYHREYNEFKKLALGLIFRDYEEVIVAGIYI
TDETSRYIYEKALANNCPIFVYGLELTYDAAPEHFLYQTLNFQKEKNLEIASLRKGRTISQLNTELDPNFFPEKKENKKK
FQLRYDLRFCEESNEQHMVESTVTYLTDFYPDVALVTTNYCLVKKIGARLSNKENINLIFKEKYTAHPDGIFLLKLLDTA
ILGETDISFIALLKHPYIYEQNAEIIDCIEDSIIRTTTSKQVTQEAQLFLEKIKRWSKGFHHAKNFAEYHIKWSDAITNR
ITCGGKRVLEFIKKYSPRFTDIYEYRQVLSFFLGRQYFYPFTDNKRFINVFSPKEASFLTYRNAILLDCTEEDFQIRDPL
VMLNLFHILSTKRSIVIFNKEKPLSRLLLQIQHSCVGNYEIKKEPTQPIETVAVVKEKLFVPIEMLPKKLSPTMIELLIN
DPYRFYVRYILAIKETNSVVVKPGHKEFGYIMHKVFQSASKTRFSKEEYTRILENELKTYATRYQYVKNLWLPRGLKILE
QFATFHNRRLEEIDILENEKELSIFIADGLELFCRFDRIESLKEDTVNIIEFKTGTIPTFKEISSFVKPQLPLQGLILQK
NRNVRFNSMMYCKPSTEKVTVKKLQSPEETIAEIHKKLTTLAQIYLSGEFDFLANITKN

Specific function: Unknown

COG id: COG2887

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011335
- InterPro:   IPR022439 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91804; Mature: 91804

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYNLHLKNDIYDTIVSYLFSRDNTPSDFSRCLVLTPNHLFSYSLKKSFSKPCILPKIVS
CEEEEEECHHHHHHHHHHHHCCCCCCCHHCCEEEECCCHHHHHHHHHCCCCCCCCHHHHH
IDAILQDFAIKNGYFNYLNFSKKAVLMLYNLMKDEKHCSIKEAMRIFTNLQQGKMEHDNF
HHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCH
IHSEIYKKFTYHREYNEFKKLALGLIFRDYEEVIVAGIYITDETSRYIYEKALANNCPIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHCCCCCEE
VYGLELTYDAAPEHFLYQTLNFQKEKNLEIASLRKGRTISQLNTELDPNFFPEKKENKKK
EEEEEEEECCCCHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCE
FQLRYDLRFCEESNEQHMVESTVTYLTDFYPDVALVTTNYCLVKKIGARLSNKENINLIF
EEEEEEEHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEE
KEKYTAHPDGIFLLKLLDTAILGETDISFIALLKHPYIYEQNAEIIDCIEDSIIRTTTSK
EECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCEEECCCCHHHHHHHHHHHHCCCHH
QVTQEAQLFLEKIKRWSKGFHHAKNFAEYHIKWSDAITNRITCGGKRVLEFIKKYSPRFT
HHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEHHHHHCCCCCCHHHHHHHHHHHCCCHH
DIYEYRQVLSFFLGRQYFYPFTDNKRFINVFSPKEASFLTYRNAILLDCTEEDFQIRDPL
HHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCEEEECCEEEEEECCCCCCCCCHH
VMLNLFHILSTKRSIVIFNKEKPLSRLLLQIQHSCVGNYEIKKEPTQPIETVAVVKEKLF
HHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHC
VPIEMLPKKLSPTMIELLINDPYRFYVRYILAIKETNSVVVKPGHKEFGYIMHKVFQSAS
CCHHHHCCCCCCCEEHHHHCCCHHHHHHHHHHEECCCEEEECCCCHHHHHHHHHHHHHHH
KTRFSKEEYTRILENELKTYATRYQYVKNLWLPRGLKILEQFATFHNRRLEEIDILENEK
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHCCCCC
ELSIFIADGLELFCRFDRIESLKEDTVNIIEFKTGTIPTFKEISSFVKPQLPLQGLILQK
EEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCEEEEC
NRNVRFNSMMYCKPSTEKVTVKKLQSPEETIAEIHKKLTTLAQIYLSGEFDFLANITKN
CCCEEECEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC
>Mature Secondary Structure
MLYNLHLKNDIYDTIVSYLFSRDNTPSDFSRCLVLTPNHLFSYSLKKSFSKPCILPKIVS
CEEEEEECHHHHHHHHHHHHCCCCCCCHHCCEEEECCCHHHHHHHHHCCCCCCCCHHHHH
IDAILQDFAIKNGYFNYLNFSKKAVLMLYNLMKDEKHCSIKEAMRIFTNLQQGKMEHDNF
HHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCH
IHSEIYKKFTYHREYNEFKKLALGLIFRDYEEVIVAGIYITDETSRYIYEKALANNCPIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHCCCCCEE
VYGLELTYDAAPEHFLYQTLNFQKEKNLEIASLRKGRTISQLNTELDPNFFPEKKENKKK
EEEEEEEECCCCHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCE
FQLRYDLRFCEESNEQHMVESTVTYLTDFYPDVALVTTNYCLVKKIGARLSNKENINLIF
EEEEEEEHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEE
KEKYTAHPDGIFLLKLLDTAILGETDISFIALLKHPYIYEQNAEIIDCIEDSIIRTTTSK
EECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCEEECCCCHHHHHHHHHHHHCCCHH
QVTQEAQLFLEKIKRWSKGFHHAKNFAEYHIKWSDAITNRITCGGKRVLEFIKKYSPRFT
HHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEHHHHHCCCCCCHHHHHHHHHHHCCCHH
DIYEYRQVLSFFLGRQYFYPFTDNKRFINVFSPKEASFLTYRNAILLDCTEEDFQIRDPL
HHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCEEEECCEEEEEECCCCCCCCCHH
VMLNLFHILSTKRSIVIFNKEKPLSRLLLQIQHSCVGNYEIKKEPTQPIETVAVVKEKLF
HHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHC
VPIEMLPKKLSPTMIELLINDPYRFYVRYILAIKETNSVVVKPGHKEFGYIMHKVFQSAS
CCHHHHCCCCCCCEEHHHHCCCHHHHHHHHHHEECCCEEEECCCCHHHHHHHHHHHHHHH
KTRFSKEEYTRILENELKTYATRYQYVKNLWLPRGLKILEQFATFHNRRLEEIDILENEK
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHCCCCC
ELSIFIADGLELFCRFDRIESLKEDTVNIIEFKTGTIPTFKEISSFVKPQLPLQGLILQK
EEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCEEEEC
NRNVRFNSMMYCKPSTEKVTVKKLQSPEETIAEIHKKLTTLAQIYLSGEFDFLANITKN
CCCEEECEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]