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The map label for this gene is 88608122

Identifier: 88608122

GI number: 88608122

Start: 542305

End: 542535

Strand: Direct

Name: 88608122

Synonym: NSE_0620

Alternate gene names: NA

Gene position: 542305-542535 (Clockwise)

Preceding gene: 88608024

Following gene: 88608267

Centisome position: 63.13

GC content: 35.5

Gene sequence:

>231_bases
TTGTCTGAAATCATTAAAAAGGCCTTTGAAGATATTGATGAGATAACAACCCTGTTGCAGTTTGATGGGAACATTACGGG
TGTGAATCAGGTGAAAGATAGACTCCTATCACTGGAGAAAAAGATTGATGAAATATGTCGTTTGAACCTTTCGGAAAACC
TCAAGCTTGAGCTGGTAGCGGCATTGAAAAAATTACTAAAAAGAGCTTACCTATCGAATAATAAAAAATAA

Upstream 100 bases:

>100_bases
GTTCATATATTCAACAGAAGATAAAGCGTAAGGCTTCGTGCAGACAAGTGTTCTGCTCTATACAGAACGAAGCAGCATAC
TTTTTAGATGAGGAATCGTT

Downstream 100 bases:

>100_bases
CCCTCTAAGTCGTGTGTGGGCCTTGGCCCTTATGCAGGAGCAAGGTAGAATAAGGATGAGTTTATAATATTTTAAATTAA
GAAAATAGGGTTATTGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 76; Mature: 75

Protein sequence:

>76_residues
MSEIIKKAFEDIDEITTLLQFDGNITGVNQVKDRLLSLEKKIDEICRLNLSENLKLELVAALKKLLKRAYLSNNKK

Sequences:

>Translated_76_residues
MSEIIKKAFEDIDEITTLLQFDGNITGVNQVKDRLLSLEKKIDEICRLNLSENLKLELVAALKKLLKRAYLSNNKK
>Mature_75_residues
SEIIKKAFEDIDEITTLLQFDGNITGVNQVKDRLLSLEKKIDEICRLNLSENLKLELVAALKKLLKRAYLSNNKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8732; Mature: 8601

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIIKKAFEDIDEITTLLQFDGNITGVNQVKDRLLSLEKKIDEICRLNLSENLKLELVA
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ALKKLLKRAYLSNNKK
HHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SEIIKKAFEDIDEITTLLQFDGNITGVNQVKDRLLSLEKKIDEICRLNLSENLKLELVA
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ALKKLLKRAYLSNNKK
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA