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The map label for this gene is p44-24 [H]

Identifier: 88607844

GI number: 88607844

Start: 1378339

End: 1379532

Strand: Reverse

Name: p44-24 [H]

Synonym: APH_1311

Alternate gene names: 88607844

Gene position: 1379532-1378339 (Counterclockwise)

Preceding gene: 88607347

Following gene: 88607662

Centisome position: 93.76

GC content: 43.3

Gene sequence:

>1194_bases
ATGAGATCTAGAAGTAAGCTATTATTAGGAAGCGTAATGATGTCGTTGGCTATAGTCATGGCTGGAAATGATGTCAGGGC
TCATGATGACGTTAGCGCTTTGGATACTGGTGGTGCGGGATATTTCTATATTGGTTTGGATTACAGTCCAGCGTTTAGCA
AGATAAGAGATTTTAGTATAAGGGAGAGTAACGGAGAGACAAAGGCAGTATATCCATACTTAAAGGATGGAAAGAGTGTA
AAGCTAGAGTCACACAAGTTTGACTGGAACACTCCTGATCCTCGGATTGGGTTTAAGGACAACATGCTTGTAGCTATGGA
AGGTAGTGTTGGTTATGGTATTGGTGGTGCCAGGGTTGAGCTTGAGATTGGTTACGAGCGCTTCAAGACCAAGGGTATTA
GAGATAGTGGTAGTAAGGAAGATGAAGCAGATACAGTATATCTACTAGCTAAGGAGTTAGCTTATGATGTTGTTACTGGA
CAGACTGATAACCTTGCTGCTGCTCTTGCCAAAACCTCCGGTAAAGACATCGTTCAGTTTGCCAATGCTGTTAAAATTAC
TAACTCCGCTATCGATGGGAAGATTTGTAATAGGGGTAAGGCTAGTGGCGGCAGCAAAGGCCTGTCTAGTAGCAAAGCAG
GTTCATGTGATAGCATAGATAAGCAGAGTGGAAGCTTGGAACAGAGTTTAACAGCGGCTTTAGGTGATAAAGGTGCTGAA
AAGTGGCCTAAAATTAATAATGGCACTAGCGACACGACACTGAATGGAAACGACACTAGTAGTACACCGTACACTAAAGA
TGCCTCTGCTACTGTAGCTAAAGACCTCGTAGCTCTTAATCATGACGAAAAAACCATAGTAGCAGGGTTACTAGCTAAAA
CTATTGAAGGGGGTGAGGTTGTTGAGATTAGGGCGGTTTCTTCTACTTCTGTAATGGTCAATGCTTGTTATGATCTTCTT
AGTGAAGGTCTAGGCGTTGTTCCTTACGCTTGTGTCGGTCTTGGAGGTAACTTCGTGGGCGTTGTTGATGGGCATATCAC
TCCTAAGCTTGCTTATAGATTAAAGGCTGGCTTGAGTTATCAGCTCTCTCCTGAAATCTCGGCTTTTGCTGGGGGTTTCT
ACCATCGTGTTGTGGGAGATGGTGTTTATGATGATCTCCCGGCTCAACTACAGTGTAAATCTCAAAAGCAATAA

Upstream 100 bases:

>100_bases
TTATGTCGGTGGGGAATTTGGTGTTAGGTTTGCTTTTTAAGGTGGTTTGTTGGAAGCGGGGTAAGTCAAACTTACCCCGC
TTCTATTAGGGAGTTAGTAT

Downstream 100 bases:

>100_bases
GGAAAATAATCTTCTCTCGCCTTGAACATTTCTCCATCAATCGGACAGACAGCTTGAGAAAGCATTATGCACTCTCTAGA
ATTGCCGACCCATACAATTG

Product: P44-24 outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MRSRSKLLLGSVMMSLAIVMAGNDVRAHDDVSALDTGGAGYFYIGLDYSPAFSKIRDFSIRESNGETKAVYPYLKDGKSV
KLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTG
QTDNLAAALAKTSGKDIVQFANAVKITNSAIDGKICNRGKASGGSKGLSSSKAGSCDSIDKQSGSLEQSLTAALGDKGAE
KWPKINNGTSDTTLNGNDTSSTPYTKDASATVAKDLVALNHDEKTIVAGLLAKTIEGGEVVEIRAVSSTSVMVNACYDLL
SEGLGVVPYACVGLGGNFVGVVDGHITPKLAYRLKAGLSYQLSPEISAFAGGFYHRVVGDGVYDDLPAQLQCKSQKQ

Sequences:

>Translated_397_residues
MRSRSKLLLGSVMMSLAIVMAGNDVRAHDDVSALDTGGAGYFYIGLDYSPAFSKIRDFSIRESNGETKAVYPYLKDGKSV
KLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTG
QTDNLAAALAKTSGKDIVQFANAVKITNSAIDGKICNRGKASGGSKGLSSSKAGSCDSIDKQSGSLEQSLTAALGDKGAE
KWPKINNGTSDTTLNGNDTSSTPYTKDASATVAKDLVALNHDEKTIVAGLLAKTIEGGEVVEIRAVSSTSVMVNACYDLL
SEGLGVVPYACVGLGGNFVGVVDGHITPKLAYRLKAGLSYQLSPEISAFAGGFYHRVVGDGVYDDLPAQLQCKSQKQ
>Mature_397_residues
MRSRSKLLLGSVMMSLAIVMAGNDVRAHDDVSALDTGGAGYFYIGLDYSPAFSKIRDFSIRESNGETKAVYPYLKDGKSV
KLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTG
QTDNLAAALAKTSGKDIVQFANAVKITNSAIDGKICNRGKASGGSKGLSSSKAGSCDSIDKQSGSLEQSLTAALGDKGAE
KWPKINNGTSDTTLNGNDTSSTPYTKDASATVAKDLVALNHDEKTIVAGLLAKTIEGGEVVEIRAVSSTSVMVNACYDLL
SEGLGVVPYACVGLGGNFVGVVDGHITPKLAYRLKAGLSYQLSPEISAFAGGFYHRVVGDGVYDDLPAQLQCKSQKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen msp4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR002566 [H]

Pfam domain/function: PF01617 Surface_Ag_2 [H]

EC number: NA

Molecular weight: Translated: 41981; Mature: 41981

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRSKLLLGSVMMSLAIVMAGNDVRAHDDVSALDTGGAGYFYIGLDYSPAFSKIRDFSI
CCCHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHCCCCCEEEEEEECCCHHHHHHHCCEE
RESNGETKAVYPYLKDGKSVKLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVE
ECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEE
LEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTGQTDNLAAALAKTSGKDIVQF
EEECHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHH
ANAVKITNSAIDGKICNRGKASGGSKGLSSSKAGSCDSIDKQSGSLEQSLTAALGDKGAE
HHHHEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHH
KWPKINNGTSDTTLNGNDTSSTPYTKDASATVAKDLVALNHDEKTIVAGLLAKTIEGGEV
HCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCE
VEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGHITPKLAYRLKAGLSY
EEEEEECCCHHHHHHHHHHHHCCCCCCCHHEEECCCCEEEEECCCCCHHHHHHHHCCCCE
QLSPEISAFAGGFYHRVVGDGVYDDLPAQLQCKSQKQ
EECCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSRSKLLLGSVMMSLAIVMAGNDVRAHDDVSALDTGGAGYFYIGLDYSPAFSKIRDFSI
CCCHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHCCCCCEEEEEEECCCHHHHHHHCCEE
RESNGETKAVYPYLKDGKSVKLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVE
ECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEE
LEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTGQTDNLAAALAKTSGKDIVQF
EEECHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHH
ANAVKITNSAIDGKICNRGKASGGSKGLSSSKAGSCDSIDKQSGSLEQSLTAALGDKGAE
HHHHEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHH
KWPKINNGTSDTTLNGNDTSSTPYTKDASATVAKDLVALNHDEKTIVAGLLAKTIEGGEV
HCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCE
VEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGHITPKLAYRLKAGLSY
EEEEEECCCHHHHHHHHHHHHCCCCCCCHHEEECCCCEEEEECCCCCHHHHHHHHCCCCE
QLSPEISAFAGGFYHRVVGDGVYDDLPAQLQCKSQKQ
EECCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8294020 [H]