Click here to switch to the map view.

The map label for this gene is ccmB [C]

Identifier: 88607459

GI number: 88607459

Start: 1456647

End: 1457291

Strand: Reverse

Name: ccmB [C]

Synonym: APH_1397

Alternate gene names: 88607459

Gene position: 1457291-1456647 (Counterclockwise)

Preceding gene: 88607785

Following gene: 88606868

Centisome position: 99.05

GC content: 41.24

Gene sequence:

>645_bases
GTGCATGAACTACGAGTTATTGCCCGTCGAGGAGGGAGTTCAGCACATGTTGCAGTGTTGTTTGCTATTGTAGTAGGAAC
TGCACTATTTGTATTGCCACCGGAATGTATCGCAAGTGTTATGCCATCTCTTTTTTGGGTATGTGGTGTTTCGGTGATGC
AAATCTCTATAAGGGCACTGTTTGAAGAGGATTATTACAGCGGAGTCCTGGAACAATTGCTAATACAAAACTTGCTTCCG
GAGATTATTTTATTTTTCAAGATACTGGCAAATTGGTTTTGTGTCGCAATACCAATCAGTATCGTCGCAATGGTTATAGA
TTTTGTTGTCTTGGGAGATGGCTTTACACATGTGCTTGTATTTGGTGCAATATTGAGTGCAACGCTGCTGATAGTGAATT
TTATCGCTGCTGTGGGGCATGCATTAGTTCTAGGTGGTGAAGGAGGATTGGTAATTGCGCAGGTCTTAATATTCCCTATA
GTCGTTCCCGTAGTAGTGTACTTTAATCTCCTTCTTCAGGCATTGAAGGGTGTAGTATTTTATACGTACACTATGACGCT
TCTTGGAGTGGGTATGATGTGCCTCATACCTATTAGCATATTTTTCGTTCTCTCAGCTATCAAGTTAGCTGTAGAGCAAA
ATTGA

Upstream 100 bases:

>100_bases
AAACACAGATCCTAAGAATGCTTGATTAATATTTGGTGTATTACTATGCTGCAAAAAAGCAATATTGTGTTTCGCTAGAG
TGTCATACTTAAAAGCATTT

Downstream 100 bases:

>100_bases
CTTTTAGTTGATATATCCTATTATAGCAAATATTGGGTGATTAGCTCAGGTGGTAGAGCGTTTGCTTGACGTGCAAAAGG
CCACTGGTTCGAGTCCAGTA

Product: putative heme exporter protein CcmB

Products: NA

Alternate protein names: Heme Exporter Protein B; Cytochrome C-Type Biogenesis Protein/Heme Exporter Protein

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MHELRVIARRGGSSAHVAVLFAIVVGTALFVLPPECIASVMPSLFWVCGVSVMQISIRALFEEDYYSGVLEQLLIQNLLP
EIILFFKILANWFCVAIPISIVAMVIDFVVLGDGFTHVLVFGAILSATLLIVNFIAAVGHALVLGGEGGLVIAQVLIFPI
VVPVVVYFNLLLQALKGVVFYTYTMTLLGVGMMCLIPISIFFVLSAIKLAVEQN

Sequences:

>Translated_214_residues
MHELRVIARRGGSSAHVAVLFAIVVGTALFVLPPECIASVMPSLFWVCGVSVMQISIRALFEEDYYSGVLEQLLIQNLLP
EIILFFKILANWFCVAIPISIVAMVIDFVVLGDGFTHVLVFGAILSATLLIVNFIAAVGHALVLGGEGGLVIAQVLIFPI
VVPVVVYFNLLLQALKGVVFYTYTMTLLGVGMMCLIPISIFFVLSAIKLAVEQN
>Mature_214_residues
MHELRVIARRGGSSAHVAVLFAIVVGTALFVLPPECIASVMPSLFWVCGVSVMQISIRALFEEDYYSGVLEQLLIQNLLP
EIILFFKILANWFCVAIPISIVAMVIDFVVLGDGFTHVLVFGAILSATLLIVNFIAAVGHALVLGGEGGLVIAQVLIFPI
VVPVVVYFNLLLQALKGVVFYTYTMTLLGVGMMCLIPISIFFVLSAIKLAVEQN

Specific function: Required For The Export Of Heme To The Periplasm For The Biogenesis Of C-Type Cytochromes. [C]

COG id: COG2386

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23155; Mature: 23155

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHELRVIARRGGSSAHVAVLFAIVVGTALFVLPPECIASVMPSLFWVCGVSVMQISIRAL
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEEDYYSGVLEQLLIQNLLPEIILFFKILANWFCVAIPISIVAMVIDFVVLGDGFTHVLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FGAILSATLLIVNFIAAVGHALVLGGEGGLVIAQVLIFPIVVPVVVYFNLLLQALKGVVF
HHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YTYTMTLLGVGMMCLIPISIFFVLSAIKLAVEQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHELRVIARRGGSSAHVAVLFAIVVGTALFVLPPECIASVMPSLFWVCGVSVMQISIRAL
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEEDYYSGVLEQLLIQNLLPEIILFFKILANWFCVAIPISIVAMVIDFVVLGDGFTHVLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FGAILSATLLIVNFIAAVGHALVLGGEGGLVIAQVLIFPIVVPVVVYFNLLLQALKGVVF
HHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YTYTMTLLGVGMMCLIPISIFFVLSAIKLAVEQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA