Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87201231

Identifier: 87201231

GI number: 87201231

Start: 3436809

End: 3437744

Strand: Reverse

Name: 87201231

Synonym: Saro_3219

Alternate gene names: NA

Gene position: 3437744-3436809 (Counterclockwise)

Preceding gene: 87201234

Following gene: 87201225

Centisome position: 96.52

GC content: 67.63

Gene sequence:

>936_bases
ATGCCGATGAAAACGAAATCCGGGATGGGCAGGAGAAGATGGCTTGTCGCCGCAAGTGCGGCGGTGCTTCTGGCAAGCTG
CGCGACTATGGCGGTCGGGCAGGAAGCATCCTGGCCCATACGGCTCCGGCAGGACATGACGCGTGTAATCCAGGTCGAAT
GGCGCCTGCGTTCCGCCGCTGGCTCTTCCTGCGAGCGTCAGGCGACCGACGCCGGGGTCCTGTTCGATGATCGCCGCGCC
TACGGCACGCGCGACTGGCCTCTGTTGCAGGATGTGCTGGGCATGGACGAGGCGCCGGTGGTCGCGGCGGTGGCTACGGG
CGGCCCTGCCGATACTGCCGGGCTGCGTGCTGGTGATGAAGTGCTGTCCATAGGCGGCGTGCCGGCCGAGGATATCGCCG
CTGCGCGCAAGGCCGGCAATCTCGTTGCCGAAGCGCTGCTTGCCGAAATTGCCGAGCGCCCGGCAGGCGTTCCTCTGGCT
GTCGAAGTTCGTCGGGGCGGGGGCGCGCCGCTGCGTCTGCAACTCAGCCCCGTTCGCCACTGCGCGGCGCGCCTCGTTCT
CGTGACGGATCGAGGCGTCGATGCCTACAGCGACCAGTCGAATGTGGCGCTCACCACCGGCCTCGTCACTTTCGCACGGA
CTGACGACGAGCTTGCCCTCGCTGCGGGGCACGAGCTTGCTCACATCATCAATGGCGACCGCAAGGGCGGCGGCATATCT
GCGCGGCGCAGGATGGAGGATCTTGCCGACGAGCGGGGCCTGCGCTTGCTGCAATGCGCGGGATACGACCGCGCCTCCGC
GCTTGGCCTGTTCGAGCGCCTTGGTTCGCGCGACTGGCTCGGCTTTCTGCGTGCGCCGACGCATCGATCCTTCGCCAAGC
GGGTCGAGCGGCTGCGCCAGACTGCGCCGTCCGGGATTTGCCCGGTTCCGAGATAG

Upstream 100 bases:

>100_bases
AATGCGGTAACTGGCCGCTCGGTGCTCCGGTTCCCGTATGAGCTGGATGGCTTGCCGGATACACCTGTCGGCGGACTTCG
CCGTGCCAAGGAAGGGCGCA

Downstream 100 bases:

>100_bases
GGTGTCCATCAATTTGCGGACGGTCCGGATCAGAAGGCTCGGTCGTGCACGAGCACGCGCGCAGTGTTGACGATGATCTT
GAGGTCGCGCCAGATCGTCC

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MPMKTKSGMGRRRWLVAASAAVLLASCATMAVGQEASWPIRLRQDMTRVIQVEWRLRSAAGSSCERQATDAGVLFDDRRA
YGTRDWPLLQDVLGMDEAPVVAAVATGGPADTAGLRAGDEVLSIGGVPAEDIAAARKAGNLVAEALLAEIAERPAGVPLA
VEVRRGGGAPLRLQLSPVRHCAARLVLVTDRGVDAYSDQSNVALTTGLVTFARTDDELALAAGHELAHIINGDRKGGGIS
ARRRMEDLADERGLRLLQCAGYDRASALGLFERLGSRDWLGFLRAPTHRSFAKRVERLRQTAPSGICPVPR

Sequences:

>Translated_311_residues
MPMKTKSGMGRRRWLVAASAAVLLASCATMAVGQEASWPIRLRQDMTRVIQVEWRLRSAAGSSCERQATDAGVLFDDRRA
YGTRDWPLLQDVLGMDEAPVVAAVATGGPADTAGLRAGDEVLSIGGVPAEDIAAARKAGNLVAEALLAEIAERPAGVPLA
VEVRRGGGAPLRLQLSPVRHCAARLVLVTDRGVDAYSDQSNVALTTGLVTFARTDDELALAAGHELAHIINGDRKGGGIS
ARRRMEDLADERGLRLLQCAGYDRASALGLFERLGSRDWLGFLRAPTHRSFAKRVERLRQTAPSGICPVPR
>Mature_310_residues
PMKTKSGMGRRRWLVAASAAVLLASCATMAVGQEASWPIRLRQDMTRVIQVEWRLRSAAGSSCERQATDAGVLFDDRRAY
GTRDWPLLQDVLGMDEAPVVAAVATGGPADTAGLRAGDEVLSIGGVPAEDIAAARKAGNLVAEALLAEIAERPAGVPLAV
EVRRGGGAPLRLQLSPVRHCAARLVLVTDRGVDAYSDQSNVALTTGLVTFARTDDELALAAGHELAHIINGDRKGGGISA
RRRMEDLADERGLRLLQCAGYDRASALGLFERLGSRDWLGFLRAPTHRSFAKRVERLRQTAPSGICPVPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33218; Mature: 33087

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50106 PDZ ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMKTKSGMGRRRWLVAASAAVLLASCATMAVGQEASWPIRLRQDMTRVIQVEWRLRSAA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GSSCERQATDAGVLFDDRRAYGTRDWPLLQDVLGMDEAPVVAAVATGGPADTAGLRAGDE
CCCHHHHCCCCCCEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCH
VLSIGGVPAEDIAAARKAGNLVAEALLAEIAERPAGVPLAVEVRRGGGAPLRLQLSPVRH
HEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECHHHH
CAARLVLVTDRGVDAYSDQSNVALTTGLVTFARTDDELALAAGHELAHIINGDRKGGGIS
HHEEEEEEECCCCCCCCCCCCEEEEEHEEEEECCCCCEEEHHCHHHHHHHCCCCCCCCHH
ARRRMEDLADERGLRLLQCAGYDRASALGLFERLGSRDWLGFLRAPTHRSFAKRVERLRQ
HHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHH
TAPSGICPVPR
HCCCCCCCCCC
>Mature Secondary Structure 
PMKTKSGMGRRRWLVAASAAVLLASCATMAVGQEASWPIRLRQDMTRVIQVEWRLRSAA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GSSCERQATDAGVLFDDRRAYGTRDWPLLQDVLGMDEAPVVAAVATGGPADTAGLRAGDE
CCCHHHHCCCCCCEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCH
VLSIGGVPAEDIAAARKAGNLVAEALLAEIAERPAGVPLAVEVRRGGGAPLRLQLSPVRH
HEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECHHHH
CAARLVLVTDRGVDAYSDQSNVALTTGLVTFARTDDELALAAGHELAHIINGDRKGGGIS
HHEEEEEEECCCCCCCCCCCCEEEEEHEEEEECCCCCEEEHHCHHHHHHHCCCCCCCCHH
ARRRMEDLADERGLRLLQCAGYDRASALGLFERLGSRDWLGFLRAPTHRSFAKRVERLRQ
HHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHH
TAPSGICPVPR
HCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA