Click here to switch to the map view.

The map label for this gene is 87201225

Identifier: 87201225

GI number: 87201225

Start: 3429441

End: 3430181

Strand: Reverse

Name: 87201225

Synonym: Saro_3213

Alternate gene names: NA

Gene position: 3430181-3429441 (Counterclockwise)

Preceding gene: 87201231

Following gene: 87201224

Centisome position: 96.31

GC content: 65.72

Gene sequence:

>741_bases
ATGCGCCGCCGCTTGCGCGCGTCCCTGGTCGTGGGTGCCGTCGCCGCTTTCGGTCTGTCCCTTGCGCCTACTGTAACCAG
CGCTTTTTCCAGCGGTTTCGATGCGGCTCCGGTAAGTCTGGCCGCGCGCGGAGGCATCGGTTCGTTCACGCCGGCTTCGG
TCGATGAACGGCTCGCTTCGCAAATTACCGTGCGCGCGCTGAACAACGGCAGGTTGTTCCGCTTCACCCCGGCCGGTACC
GAAACCCGCCCCAACCGGTCGGTGACCGTGGCGGTCCGTCTCGATTCGCAGAGTGCACGTGCCTTCTCGGTCCGCAGTGC
GCTGTCCGACGCCGCTGGCAAGGCCGGAGCCTCACCGGTCCGCATCGCACCGGTTGCTTTCAATCTCGGCATGGCCCGCG
GTTACAGCAGCTTTGCGGCTTCTTCGACGACGCTGCACGATCTCCAGCGTATCGACATGCCCGATCTTGCCAAGTTCAAG
AAGGCAACGCCGGCTTCGGCGCCGAGCCGCTTCGCGCCGCGGATCGAGGCCGAGGGCCGCGATCAGGCTGGTCGCGCGCC
GCGTACGCTGGAAGGGCAGGGCAACTACCAGCTCGATCTGGGCGGCAGCTATCGCCTTACCCGCAATCTCAACGTCACGG
CTGGCGTCCGCTATTCGCCCGAGCGTGATCGCTTGCTCCCGCTGACCGATGGGAAGCAGGACAATCAGGCCGTCTACGTC
GGAACCCAGTTCCGCTTCTGA

Upstream 100 bases:

>100_bases
GCGGAAAACAAGGAAATCGCGGGTCGCAAGGCGGCCCTGTTGGGGAAGAATCAGGGTTCACATGAAGGGCAGCGGCGACA
GGATGAAGGCAGGAGGCAGC

Downstream 100 bases:

>100_bases
CGCGCCCGGGCCGATATTTCCCGGATCGCCCAATATTCTTGATTGTTTGAATGCTGCGCCGCTGCTGCGCTGCAAATTCC
TCGCGCTTGCGCAGCAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MRRRLRASLVVGAVAAFGLSLAPTVTSAFSSGFDAAPVSLAARGGIGSFTPASVDERLASQITVRALNNGRLFRFTPAGT
ETRPNRSVTVAVRLDSQSARAFSVRSALSDAAGKAGASPVRIAPVAFNLGMARGYSSFAASSTTLHDLQRIDMPDLAKFK
KATPASAPSRFAPRIEAEGRDQAGRAPRTLEGQGNYQLDLGGSYRLTRNLNVTAGVRYSPERDRLLPLTDGKQDNQAVYV
GTQFRF

Sequences:

>Translated_246_residues
MRRRLRASLVVGAVAAFGLSLAPTVTSAFSSGFDAAPVSLAARGGIGSFTPASVDERLASQITVRALNNGRLFRFTPAGT
ETRPNRSVTVAVRLDSQSARAFSVRSALSDAAGKAGASPVRIAPVAFNLGMARGYSSFAASSTTLHDLQRIDMPDLAKFK
KATPASAPSRFAPRIEAEGRDQAGRAPRTLEGQGNYQLDLGGSYRLTRNLNVTAGVRYSPERDRLLPLTDGKQDNQAVYV
GTQFRF
>Mature_246_residues
MRRRLRASLVVGAVAAFGLSLAPTVTSAFSSGFDAAPVSLAARGGIGSFTPASVDERLASQITVRALNNGRLFRFTPAGT
ETRPNRSVTVAVRLDSQSARAFSVRSALSDAAGKAGASPVRIAPVAFNLGMARGYSSFAASSTTLHDLQRIDMPDLAKFK
KATPASAPSRFAPRIEAEGRDQAGRAPRTLEGQGNYQLDLGGSYRLTRNLNVTAGVRYSPERDRLLPLTDGKQDNQAVYV
GTQFRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26150; Mature: 26150

Theoretical pI: Translated: 11.79; Mature: 11.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRLRASLVVGAVAAFGLSLAPTVTSAFSSGFDAAPVSLAARGGIGSFTPASVDERLAS
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
QITVRALNNGRLFRFTPAGTETRPNRSVTVAVRLDSQSARAFSVRSALSDAAGKAGASPV
HEEEEEECCCEEEEEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCE
RIAPVAFNLGMARGYSSFAASSTTLHDLQRIDMPDLAKFKKATPASAPSRFAPRIEAEGR
EEEEEEEECHHHCCCHHHHCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
DQAGRAPRTLEGQGNYQLDLGGSYRLTRNLNVTAGVRYSPERDRLLPLTDGKQDNQAVYV
CCCCCCCCEECCCCCEEEECCCCEEEEECCCEEECEEECCCCCCEEECCCCCCCCCEEEE
GTQFRF
EEEECC
>Mature Secondary Structure
MRRRLRASLVVGAVAAFGLSLAPTVTSAFSSGFDAAPVSLAARGGIGSFTPASVDERLAS
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
QITVRALNNGRLFRFTPAGTETRPNRSVTVAVRLDSQSARAFSVRSALSDAAGKAGASPV
HEEEEEECCCEEEEEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCE
RIAPVAFNLGMARGYSSFAASSTTLHDLQRIDMPDLAKFKKATPASAPSRFAPRIEAEGR
EEEEEEEECHHHCCCHHHHCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
DQAGRAPRTLEGQGNYQLDLGGSYRLTRNLNVTAGVRYSPERDRLLPLTDGKQDNQAVYV
CCCCCCCCEECCCCCEEEECCCCEEEEECCCEEECEEECCCCCCEEECCCCCCCCCEEEE
GTQFRF
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA