Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87201215

Identifier: 87201215

GI number: 87201215

Start: 3419630

End: 3420844

Strand: Reverse

Name: 87201215

Synonym: Saro_3203

Alternate gene names: NA

Gene position: 3420844-3419630 (Counterclockwise)

Preceding gene: 87201218

Following gene: 87201214

Centisome position: 96.05

GC content: 63.79

Gene sequence:

>1215_bases
ATGACGCCAGCCGCACCGGCGATGGGCACGACCGAAATATTCCTGATCGCGCTGACAATCATCGTTTCGGTACCATACCT
GGCATGGCGGCTGCTGCGCACCGATTACTGGGCGCCGCTCGTCGTCGTCCAGATCATCGGCGGCATCCTGCTCGGACCGG
GCGTGCTCGGCGCGGCATTCCCGGAATACTACGCCTTCGTCTTCAATCAGCAGGTCATCGGATCGCTCAACGGCATCGCG
TGGTGGGCGGTGATGATGTTCGTATTCGTGGCGGGCCTCGAACTGGACATAACCGATGCCTGGGCCAACCGCCGGGAGAC
GACGATTACCGCCGCCGGAGCTTTGCTGACGCCGCTCGTCACCGGTGCGATCGCCGCCGCATTCCTCCTGCGCGGGCCCG
GCTGGATCGGTCCCAATGGAACATACCCGCAGGCCGTCCTCGGCATAGGAATGGCCTGCGCCGTGACAGCGCTCCCCATC
CTCGTCCTGCTGATGGAAAAGCTCGGCATATTCCGGGAGCCACTCGGCCAGCGCCTGCTGCGCTACGCCAGCCTTGACGA
TATCGCCATCTGGGGCGTCCTCGCGCTGATCCTCGTCGACTGGCACCGCGTGGAACGGCAGGCGATCTTCCTCGCAGGGT
TCGCCGTGGCCGCCTGGGTCGTCCGCGCCCTGTTCCGTCGTCTCGAAGAGAGCGACCGCTGGTACGTTTCGCTGATCTGG
CTGGCCGTGGTCGGCTTCGCGGCCGACTGGTCGGGCCTGCACTTCATGGTCGGCGCATTTCTGGCCGGTGCCGTGCTCGA
TGCGCACTGGTTCACGCGTGATCGGCTCGATGGTTTCCGCCAGTTCCTCCTGCTTGCGGTCATGCCCGTCTTCTTCCTTT
CGACGGGCCTGCGCACAAAGTGGGATGTCGGCGGACTCGCCGTATTCGGTGCGGCATTCCTGTTTCTTGTCGCTTCGGTG
GCGGGGAAGCTCGTCGGCGTGCGGATCGCGGGCCGCATCCTTGGCTGGGCCAAGGGTGATGCCTCGATCATCGGCTGGAT
GCTCCAGACCAAGGCGCTGATCATGATCATCTTCGTCAACGTCCTGCTCGACAAGGGCATCGTGACGAACGAGACGTTTA
CGGCGCTCCTGCTCATGGCGGTGATGAGCACGATGCTTACCGTACCCATGGTTACACCGAAGCTGAGGGCGCTGGCGAAA
CCAACCGTCCATTAA

Upstream 100 bases:

>100_bases
GTCATGGGCCGTCTCCTGGTGAAGGCGATATGGCCTTAGAGGTCGATTGGACAAGCCGTCGCGAACGCGCAAGGACGATG
GCGCATCGGGAGGACAAGCA

Downstream 100 bases:

>100_bases
CACCCGTTCCGCTAGGTTCGGCGGAATGGAGACGGTTGATCTGGTCATGGCGGGCGTTGCCGGGCTGATGCTCGGCCTGT
GCCTGTGCCTATATCGCTTC

Product: sodium/hydrogen exchanger

Products: NA

Alternate protein names: Na+/H+ Antiporter; Cation/H+ Antiporter; CationProton Antiporter; Na(+)/H(+) Antiporter; Sodium/Hydrogen Antiporter; Sodium/Hydrogen Exchanger Family Protein; Monovalent CationProton Antiporter-2 Family Protein; Cation Transporter/Universal Stress Family Protein; K+/H+-Antiporter; Na/H Antiporter; Na+/H+-Exchanging Protein; CationProton Antiporter Transmembrane Protein; Integral Membrane Ion Exchanger; Germination Protein GerN; Cation/Hydrogen Exchanger; Cation/Proton Antiporter; Na+/ H+ Antiporter; Transporter Monovalent CationProton Antiporter Family; Na/H(+) Antiporter; Na/H Exchanger Membrane Protein; Sodium/Hydrogen Transporter; Kef-Type K+ Transport System Membrane Component; Transmembrane Na+/H+ Exchanger Family Transporter Protein; Kef-Type K+ Transport Systems; Glutathione-Regulated Potassium-Efflux System Protein KefB; Na+H+ Antiporter; Filamentation Induced By CAMP Protein Fic; Kef-Type K+ Transporter Membrane Components-Like Protein; Membrane Antiporter

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MTPAAPAMGTTEIFLIALTIIVSVPYLAWRLLRTDYWAPLVVVQIIGGILLGPGVLGAAFPEYYAFVFNQQVIGSLNGIA
WWAVMMFVFVAGLELDITDAWANRRETTITAAGALLTPLVTGAIAAAFLLRGPGWIGPNGTYPQAVLGIGMACAVTALPI
LVLLMEKLGIFREPLGQRLLRYASLDDIAIWGVLALILVDWHRVERQAIFLAGFAVAAWVVRALFRRLEESDRWYVSLIW
LAVVGFAADWSGLHFMVGAFLAGAVLDAHWFTRDRLDGFRQFLLLAVMPVFFLSTGLRTKWDVGGLAVFGAAFLFLVASV
AGKLVGVRIAGRILGWAKGDASIIGWMLQTKALIMIIFVNVLLDKGIVTNETFTALLLMAVMSTMLTVPMVTPKLRALAK
PTVH

Sequences:

>Translated_404_residues
MTPAAPAMGTTEIFLIALTIIVSVPYLAWRLLRTDYWAPLVVVQIIGGILLGPGVLGAAFPEYYAFVFNQQVIGSLNGIA
WWAVMMFVFVAGLELDITDAWANRRETTITAAGALLTPLVTGAIAAAFLLRGPGWIGPNGTYPQAVLGIGMACAVTALPI
LVLLMEKLGIFREPLGQRLLRYASLDDIAIWGVLALILVDWHRVERQAIFLAGFAVAAWVVRALFRRLEESDRWYVSLIW
LAVVGFAADWSGLHFMVGAFLAGAVLDAHWFTRDRLDGFRQFLLLAVMPVFFLSTGLRTKWDVGGLAVFGAAFLFLVASV
AGKLVGVRIAGRILGWAKGDASIIGWMLQTKALIMIIFVNVLLDKGIVTNETFTALLLMAVMSTMLTVPMVTPKLRALAK
PTVH
>Mature_403_residues
TPAAPAMGTTEIFLIALTIIVSVPYLAWRLLRTDYWAPLVVVQIIGGILLGPGVLGAAFPEYYAFVFNQQVIGSLNGIAW
WAVMMFVFVAGLELDITDAWANRRETTITAAGALLTPLVTGAIAAAFLLRGPGWIGPNGTYPQAVLGIGMACAVTALPIL
VLLMEKLGIFREPLGQRLLRYASLDDIAIWGVLALILVDWHRVERQAIFLAGFAVAAWVVRALFRRLEESDRWYVSLIWL
AVVGFAADWSGLHFMVGAFLAGAVLDAHWFTRDRLDGFRQFLLLAVMPVFFLSTGLRTKWDVGGLAVFGAAFLFLVASVA
GKLVGVRIAGRILGWAKGDASIIGWMLQTKALIMIIFVNVLLDKGIVTNETFTALLLMAVMSTMLTVPMVTPKLRALAKP
TVH

Specific function: Unknown

COG id: COG0475

COG function: function code P; Kef-type K+ transport systems, membrane components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6322367, Length=406, Percent_Identity=23.3990147783251, Blast_Score=91, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43972; Mature: 43841

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAAPAMGTTEIFLIALTIIVSVPYLAWRLLRTDYWAPLVVVQIIGGILLGPGVLGAAF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHH
PEYYAFVFNQQVIGSLNGIAWWAVMMFVFVAGLELDITDAWANRRETTITAAGALLTPLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCCCCHHHHHHHHHHHHH
TGAIAAAFLLRGPGWIGPNGTYPQAVLGIGMACAVTALPILVLLMEKLGIFREPLGQRLL
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYASLDDIAIWGVLALILVDWHRVERQAIFLAGFAVAAWVVRALFRRLEESDRWYVSLIW
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LAVVGFAADWSGLHFMVGAFLAGAVLDAHWFTRDRLDGFRQFLLLAVMPVFFLSTGLRTK
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
WDVGGLAVFGAAFLFLVASVAGKLVGVRIAGRILGWAKGDASIIGWMLQTKALIMIIFVN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VLLDKGIVTNETFTALLLMAVMSTMLTVPMVTPKLRALAKPTVH
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
>Mature Secondary Structure 
TPAAPAMGTTEIFLIALTIIVSVPYLAWRLLRTDYWAPLVVVQIIGGILLGPGVLGAAF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHH
PEYYAFVFNQQVIGSLNGIAWWAVMMFVFVAGLELDITDAWANRRETTITAAGALLTPLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCCCCHHHHHHHHHHHHH
TGAIAAAFLLRGPGWIGPNGTYPQAVLGIGMACAVTALPILVLLMEKLGIFREPLGQRLL
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYASLDDIAIWGVLALILVDWHRVERQAIFLAGFAVAAWVVRALFRRLEESDRWYVSLIW
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LAVVGFAADWSGLHFMVGAFLAGAVLDAHWFTRDRLDGFRQFLLLAVMPVFFLSTGLRTK
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
WDVGGLAVFGAAFLFLVASVAGKLVGVRIAGRILGWAKGDASIIGWMLQTKALIMIIFVN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VLLDKGIVTNETFTALLLMAVMSTMLTVPMVTPKLRALAKPTVH
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA