| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201214
Identifier: 87201214
GI number: 87201214
Start: 3419089
End: 3419604
Strand: Reverse
Name: 87201214
Synonym: Saro_3202
Alternate gene names: NA
Gene position: 3419604-3419089 (Counterclockwise)
Preceding gene: 87201215
Following gene: 87201213
Centisome position: 96.01
GC content: 63.95
Gene sequence:
>516_bases ATGGAGACGGTTGATCTGGTCATGGCGGGCGTTGCCGGGCTGATGCTCGGCCTGTGCCTGTGCCTATATCGCTTCGCCAC GCTCCTTACCGGCTGGCAGGTTGCCATCGCCCAGGTCTGGCGTGGCGGCTATCGCGACCTCGAACGGCTCGACGATCTTG CCCACATGCAGCAATCTCTGGGCACGCTGCGCGGGTGGAACTGGCGCGACGGCGAAGGCAAGCGCTGGATCGAGGACGAG GTCGTCTTCCAGACACCCGAAGGAGATCGCATTCACGCCATGGTCGGTCGCCAGGTCCAGCGCTCGTGGAAGCCCGCCAG CGTCTTTCGCGTGTGGTATGACCGGGCAAACCCGCAGAACGTTACCGCCTATGGCCCCGGCTACTGGCTGCTCATGGCGA TACTCACAATCGCCGCACTTCATGCCACCTTCGCCTGGGGCATCGATTGGGCGCGCACCGGTCAGCCTCCGCAATGGCTT TTCGAACTGGCCGCGCCCGACGTCTCGCCAAAATAA
Upstream 100 bases:
>100_bases GTGATGAGCACGATGCTTACCGTACCCATGGTTACACCGAAGCTGAGGGCGCTGGCGAAACCAACCGTCCATTAACACCC GTTCCGCTAGGTTCGGCGGA
Downstream 100 bases:
>100_bases GAGTGGCGGGGGCCTGCAAACTCGCCTCTCCTGCCGCAAAGCACACAGAGAGGCGCCGAATGTCCGCAATCGATCCCGTT ACCCGTCTGATCGCCATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues METVDLVMAGVAGLMLGLCLCLYRFATLLTGWQVAIAQVWRGGYRDLERLDDLAHMQQSLGTLRGWNWRDGEGKRWIEDE VVFQTPEGDRIHAMVGRQVQRSWKPASVFRVWYDRANPQNVTAYGPGYWLLMAILTIAALHATFAWGIDWARTGQPPQWL FELAAPDVSPK
Sequences:
>Translated_171_residues METVDLVMAGVAGLMLGLCLCLYRFATLLTGWQVAIAQVWRGGYRDLERLDDLAHMQQSLGTLRGWNWRDGEGKRWIEDE VVFQTPEGDRIHAMVGRQVQRSWKPASVFRVWYDRANPQNVTAYGPGYWLLMAILTIAALHATFAWGIDWARTGQPPQWL FELAAPDVSPK >Mature_171_residues METVDLVMAGVAGLMLGLCLCLYRFATLLTGWQVAIAQVWRGGYRDLERLDDLAHMQQSLGTLRGWNWRDGEGKRWIEDE VVFQTPEGDRIHAMVGRQVQRSWKPASVFRVWYDRANPQNVTAYGPGYWLLMAILTIAALHATFAWGIDWARTGQPPQWL FELAAPDVSPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19462; Mature: 19462
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METVDLVMAGVAGLMLGLCLCLYRFATLLTGWQVAIAQVWRGGYRDLERLDDLAHMQQSL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH GTLRGWNWRDGEGKRWIEDEVVFQTPEGDRIHAMVGRQVQRSWKPASVFRVWYDRANPQN HHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC VTAYGPGYWLLMAILTIAALHATFAWGIDWARTGQPPQWLFELAAPDVSPK EEEECCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure METVDLVMAGVAGLMLGLCLCLYRFATLLTGWQVAIAQVWRGGYRDLERLDDLAHMQQSL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH GTLRGWNWRDGEGKRWIEDEVVFQTPEGDRIHAMVGRQVQRSWKPASVFRVWYDRANPQN HHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC VTAYGPGYWLLMAILTIAALHATFAWGIDWARTGQPPQWLFELAAPDVSPK EEEECCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA