| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201213
Identifier: 87201213
GI number: 87201213
Start: 3418559
End: 3419029
Strand: Reverse
Name: 87201213
Synonym: Saro_3201
Alternate gene names: NA
Gene position: 3419029-3418559 (Counterclockwise)
Preceding gene: 87201214
Following gene: 87201212
Centisome position: 96.0
GC content: 60.93
Gene sequence:
>471_bases ATGTCCGCAATCGATCCCGTTACCCGTCTGATCGCCATCGAGGAGATCAAGCAGCTCAAGGCCCGCTATTTCCGCTGCAT GGACACCAAGGACTATGCCGGCTTGCGCCAGGTCTTTGCCGACGACGCCGTGTTCGACGCCTCCTGCTCGCTGTCCATCG AACCTGCCGCGGACGCGGAAAACTGGACCCATTCAGGCGGCGACCAGATCGCGGCCTTCGTGGAATCCGCCGTCGATGCC CTGCACACTGTCCACCACGGCCACTGCCACGAGATCGAATTGCTTTCGGAAACCGAGGCACGGGGCGTCATCGCGATGGA AGACCAGATCTGGGACGCGAATGGCGCCCTGTTCCTCCACGGCATGGGCCACTACCACGAAACCTATCGCAAGGAGGAAG GCGGCTGGAAGATCGTCACAAGCCGCATCAGCAGGCTTCATGTCATTGTCGGATCATCCGGCGTGGAATGA
Upstream 100 bases:
>100_bases GGCTTTTCGAACTGGCCGCGCCCGACGTCTCGCCAAAATAAGAGTGGCGGGGGCCTGCAAACTCGCCTCTCCTGCCGCAA AGCACACAGAGAGGCGCCGA
Downstream 100 bases:
>100_bases CCGCCGCCTATCTGGCATAGCAGGCGGGTGAGCCTCATCGATCCCGTTTCCGACAGTTCCGCCGTCCTCGACCGCCTCCA CGAAGTGTTCGGCTTCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: Bile-Acid 7-Alpha Dehydratase
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSAIDPVTRLIAIEEIKQLKARYFRCMDTKDYAGLRQVFADDAVFDASCSLSIEPAADAENWTHSGGDQIAAFVESAVDA LHTVHHGHCHEIELLSETEARGVIAMEDQIWDANGALFLHGMGHYHETYRKEEGGWKIVTSRISRLHVIVGSSGVE
Sequences:
>Translated_156_residues MSAIDPVTRLIAIEEIKQLKARYFRCMDTKDYAGLRQVFADDAVFDASCSLSIEPAADAENWTHSGGDQIAAFVESAVDA LHTVHHGHCHEIELLSETEARGVIAMEDQIWDANGALFLHGMGHYHETYRKEEGGWKIVTSRISRLHVIVGSSGVE >Mature_155_residues SAIDPVTRLIAIEEIKQLKARYFRCMDTKDYAGLRQVFADDAVFDASCSLSIEPAADAENWTHSGGDQIAAFVESAVDAL HTVHHGHCHEIELLSETEARGVIAMEDQIWDANGALFLHGMGHYHETYRKEEGGWKIVTSRISRLHVIVGSSGVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17280; Mature: 17148
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIDPVTRLIAIEEIKQLKARYFRCMDTKDYAGLRQVFADDAVFDASCSLSIEPAADAE CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEECCCCCEEECCCCCCC NWTHSGGDQIAAFVESAVDALHTVHHGHCHEIELLSETEARGVIAMEDQIWDANGALFLH CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCEECCCCEEEEE GMGHYHETYRKEEGGWKIVTSRISRLHVIVGSSGVE CCCHHHHHHHCCCCCEEHHHHHHHHEEEEECCCCCC >Mature Secondary Structure SAIDPVTRLIAIEEIKQLKARYFRCMDTKDYAGLRQVFADDAVFDASCSLSIEPAADAE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEECCCCCEEECCCCCCC NWTHSGGDQIAAFVESAVDALHTVHHGHCHEIELLSETEARGVIAMEDQIWDANGALFLH CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCEECCCCEEEEE GMGHYHETYRKEEGGWKIVTSRISRLHVIVGSSGVE CCCHHHHHHHCCCCCEEHHHHHHHHEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA