| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201171
Identifier: 87201171
GI number: 87201171
Start: 3371606
End: 3372700
Strand: Direct
Name: 87201171
Synonym: Saro_3159
Alternate gene names: NA
Gene position: 3371606-3372700 (Clockwise)
Preceding gene: 87201169
Following gene: 87201172
Centisome position: 94.67
GC content: 68.77
Gene sequence:
>1095_bases ATGATGCGGCAGATATTCCTGCTGGCTGGCGCGGCGGCGTTGGCGATCGGTGCGCCCGCCCTCGCGCAGGGCAAGGGCGG TAACGGCGGCAATGGCAACGGCCAGGGCGGCGAGCACGGCGCGCAACATGGCGGCGGCGCAAAGGCGCAGGGCCAGGGCA ATCGCGGCGGCGGCGAGGCCGCAAAGGGTCCGGAACGCAAGATGGCCAGCGTCCAGCCCGGACGGAGCGACAAGGCCTCG CCGGCCAAGGCAGAGCGCGGGCCCGACCGCGCGGTTGCCGCCGCCGGCAAGGCAAACCGCAACGAGCAGGCCGATAGCCG TGCGATGGAGGACACCGCACCCGGCCGGAGCGGCCAGGCAAAGGGCATCTACAACGGCAAGGGACCTGGCAACAGCGCCG ACCTTGCGCGCGGCAATGCGCAGCGGGCCGCGCCCGGCAATCTGCGCGAGGCCGCCCGGGTCGTCGCCACGCGCCGCTGG GACGGCGGGCGCTATCGCTATGACGACAGCCGCTATCTCGTCCCGGTAAGCGATTCCTGCCCGCCGGGGCTGGCGAGGAA AAACAACGGCTGCCTCCCGCCCGGGCAGGCGCGCAAGCTGGCGCCGACCGGCGGATGGTCTGGCTGGTATCCCACCCGCT ACTTCGGCGACGGCTACGACTGGCGCTATGACAACGGCTATCTCTACCGGCTTGGCAACGGCGGGCTTGTCTCGGCCTTC GTGCCGCTGCTGGGCGGCGCCCTGTTCGGCGGCAATATCTGGCCTTCGCAGTACACCAGCTACGAGGTGCCAGCCTATTA TGACCGCTTCTACGGCTACGATGACGACTACGATTATCGTTATGCGCAGAACGCCATTTTCGCAGTCGACCCCGAGACGC AGCAGATCGAGGCAATCGCGGGTCTCCTGACCGGCGATCCGTGGTCGGTCGGGCAGGCGATGCCGCTCGGCTACGACATC TACAACGTGCCGCCAGCCTACCGCGACCGCTACGTCGACGGGCCGGATGCCATGTACCGATACAGCGACGGCTACGTCTA CGAGGTCGACCCCACGACCCAGCTCGTGCGGGCCGTGATCGAACTGCTAGTCTGA
Upstream 100 bases:
>100_bases AGAAGCTCCGCCACGGCGCGGCAAGGCCAGTGCGGGAACCGCCGGCGCGGGAACGGAGGGCGGAGGCACGCGTTCTGCGA CCACGGATTCCAGGAGAACC
Downstream 100 bases:
>100_bases CCAGGGCCACGAGGAGCCGTAGATGCGACGCTTGAAAACGATGATCGCCGGGGCCGCCATCGGCCTCTCCTCGCTCGCGC TGGCAGCATGCGACAAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MMRQIFLLAGAAALAIGAPALAQGKGGNGGNGNGQGGEHGAQHGGGAKAQGQGNRGGGEAAKGPERKMASVQPGRSDKAS PAKAERGPDRAVAAAGKANRNEQADSRAMEDTAPGRSGQAKGIYNGKGPGNSADLARGNAQRAAPGNLREAARVVATRRW DGGRYRYDDSRYLVPVSDSCPPGLARKNNGCLPPGQARKLAPTGGWSGWYPTRYFGDGYDWRYDNGYLYRLGNGGLVSAF VPLLGGALFGGNIWPSQYTSYEVPAYYDRFYGYDDDYDYRYAQNAIFAVDPETQQIEAIAGLLTGDPWSVGQAMPLGYDI YNVPPAYRDRYVDGPDAMYRYSDGYVYEVDPTTQLVRAVIELLV
Sequences:
>Translated_364_residues MMRQIFLLAGAAALAIGAPALAQGKGGNGGNGNGQGGEHGAQHGGGAKAQGQGNRGGGEAAKGPERKMASVQPGRSDKAS PAKAERGPDRAVAAAGKANRNEQADSRAMEDTAPGRSGQAKGIYNGKGPGNSADLARGNAQRAAPGNLREAARVVATRRW DGGRYRYDDSRYLVPVSDSCPPGLARKNNGCLPPGQARKLAPTGGWSGWYPTRYFGDGYDWRYDNGYLYRLGNGGLVSAF VPLLGGALFGGNIWPSQYTSYEVPAYYDRFYGYDDDYDYRYAQNAIFAVDPETQQIEAIAGLLTGDPWSVGQAMPLGYDI YNVPPAYRDRYVDGPDAMYRYSDGYVYEVDPTTQLVRAVIELLV >Mature_364_residues MMRQIFLLAGAAALAIGAPALAQGKGGNGGNGNGQGGEHGAQHGGGAKAQGQGNRGGGEAAKGPERKMASVQPGRSDKAS PAKAERGPDRAVAAAGKANRNEQADSRAMEDTAPGRSGQAKGIYNGKGPGNSADLARGNAQRAAPGNLREAARVVATRRW DGGRYRYDDSRYLVPVSDSCPPGLARKNNGCLPPGQARKLAPTGGWSGWYPTRYFGDGYDWRYDNGYLYRLGNGGLVSAF VPLLGGALFGGNIWPSQYTSYEVPAYYDRFYGYDDDYDYRYAQNAIFAVDPETQQIEAIAGLLTGDPWSVGQAMPLGYDI YNVPPAYRDRYVDGPDAMYRYSDGYVYEVDPTTQLVRAVIELLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38847; Mature: 38847
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRQIFLLAGAAALAIGAPALAQGKGGNGGNGNGQGGEHGAQHGGGAKAQGQGNRGGGEA CCCEEEEHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AKGPERKMASVQPGRSDKASPAKAERGPDRAVAAAGKANRNEQADSRAMEDTAPGRSGQA CCCHHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC KGIYNGKGPGNSADLARGNAQRAAPGNLREAARVVATRRWDGGRYRYDDSRYLVPVSDSC CCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHEECCCCCEEECCCEEEEECCCCC PPGLARKNNGCLPPGQARKLAPTGGWSGWYPTRYFGDGYDWRYDNGYLYRLGNGGLVSAF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCEEEEECCCCHHHHH VPLLGGALFGGNIWPSQYTSYEVPAYYDRFYGYDDDYDYRYAQNAIFAVDPETQQIEAIA HHHHCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHCCCEEEECCCHHHHHHHH GLLTGDPWSVGQAMPLGYDIYNVPPAYRDRYVDGPDAMYRYSDGYVYEVDPTTQLVRAVI HHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHEEEECCCEEEEECCHHHHHHHHH ELLV HHHC >Mature Secondary Structure MMRQIFLLAGAAALAIGAPALAQGKGGNGGNGNGQGGEHGAQHGGGAKAQGQGNRGGGEA CCCEEEEHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AKGPERKMASVQPGRSDKASPAKAERGPDRAVAAAGKANRNEQADSRAMEDTAPGRSGQA CCCHHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC KGIYNGKGPGNSADLARGNAQRAAPGNLREAARVVATRRWDGGRYRYDDSRYLVPVSDSC CCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHEECCCCCEEECCCEEEEECCCCC PPGLARKNNGCLPPGQARKLAPTGGWSGWYPTRYFGDGYDWRYDNGYLYRLGNGGLVSAF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCEEEEECCCCHHHHH VPLLGGALFGGNIWPSQYTSYEVPAYYDRFYGYDDDYDYRYAQNAIFAVDPETQQIEAIA HHHHCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHCCCEEEECCCHHHHHHHH GLLTGDPWSVGQAMPLGYDIYNVPPAYRDRYVDGPDAMYRYSDGYVYEVDPTTQLVRAVI HHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHEEEECCCEEEEECCHHHHHHHHH ELLV HHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA