Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87201168

Identifier: 87201168

GI number: 87201168

Start: 3368961

End: 3369755

Strand: Direct

Name: 87201168

Synonym: Saro_3156

Alternate gene names: NA

Gene position: 3368961-3369755 (Clockwise)

Preceding gene: 87201167

Following gene: 87201169

Centisome position: 94.59

GC content: 67.3

Gene sequence:

>795_bases
ATGAACGCACCGCAACTCTCCCTCGCGATCCGCGAGGCGATGCTGACCGCCGATCCTTCGGCCAAGGTCATGGCCACGCG
CAATCTCGTCCGTCGCTGGCGCGCGGGAGAGCTGGCGTTCGCCTTCGACCATCCCATGCCCGACGTGCCCGCCCGCCCGG
AAAAGCCCGAACTGCTCCCGCCCAACGCCATGCCCAAGCGCGGGCGCGGCGGATCGGAGCGCGGGCGGATCGCGCTGCTC
CATGCGCTGGCGCACATCGAATTCGTGGCGATCGACCTCGCGCTGGATGCGGCGGGCCGTTTTGGCGCTGCGATGGGGCG
CGCGTTCGTCGACGACTGGCTGAGCGTAGCCGCCGATGAATCAATGCATTACGCGCTCCTGGCGCGCCGTCTGCGTACGC
TCGGCAGCTTCTACGGCGCCATGCCCGCGCACGACGGTCTCTGGGATGCGGCGCGCGAAACCGCACACGACGTGGCGGCG
CGGCTGGCGGTTGTGCCGATGGTCCTCGAAGCGCGCGCGCTCGACGTGACGCCGATGACCGTCGAGCGGTTTCTCGCGGC
AGGGGACGAGCGGTCTGCCCGAGTGCTGCAACGAATCCTTGACGACGAAATCCGCCATGTGCGGTTCGGCACAAAACATT
TCAGCGCAGTGTGCGAAATACGCGGAGAATCGCCGCCCGACGCGTGGAAAACCCTCGTCGCGCAGCACTTTCGCGGCGCC
ATTAAGCCGCCGTTCAACGACTCGGCGCGTCGATCAGCCGGTTTGTCGCTCGATTTCATGGCAGGGGTTGCTTGA

Upstream 100 bases:

>100_bases
CAAGGACCACGCCGCGCAAGTGCTTGCGGCGGCAAAAGCGCTGTGATCCGCCGCGTGACCCGAACGACACCTGACGACAC
CTGACGGCACCGAACCGCAC

Downstream 100 bases:

>100_bases
CCGCAACCGGCCCGTCTACCCCCAACACACGAGATGGCGGGGGGTTCCGACCAACTCTGAAACATCCCAAGGCGGTGGGC
CAAAGCCTGCTCCTCGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNAPQLSLAIREAMLTADPSAKVMATRNLVRRWRAGELAFAFDHPMPDVPARPEKPELLPPNAMPKRGRGGSERGRIALL
HALAHIEFVAIDLALDAAGRFGAAMGRAFVDDWLSVAADESMHYALLARRLRTLGSFYGAMPAHDGLWDAARETAHDVAA
RLAVVPMVLEARALDVTPMTVERFLAAGDERSARVLQRILDDEIRHVRFGTKHFSAVCEIRGESPPDAWKTLVAQHFRGA
IKPPFNDSARRSAGLSLDFMAGVA

Sequences:

>Translated_264_residues
MNAPQLSLAIREAMLTADPSAKVMATRNLVRRWRAGELAFAFDHPMPDVPARPEKPELLPPNAMPKRGRGGSERGRIALL
HALAHIEFVAIDLALDAAGRFGAAMGRAFVDDWLSVAADESMHYALLARRLRTLGSFYGAMPAHDGLWDAARETAHDVAA
RLAVVPMVLEARALDVTPMTVERFLAAGDERSARVLQRILDDEIRHVRFGTKHFSAVCEIRGESPPDAWKTLVAQHFRGA
IKPPFNDSARRSAGLSLDFMAGVA
>Mature_264_residues
MNAPQLSLAIREAMLTADPSAKVMATRNLVRRWRAGELAFAFDHPMPDVPARPEKPELLPPNAMPKRGRGGSERGRIALL
HALAHIEFVAIDLALDAAGRFGAAMGRAFVDDWLSVAADESMHYALLARRLRTLGSFYGAMPAHDGLWDAARETAHDVAA
RLAVVPMVLEARALDVTPMTVERFLAAGDERSARVLQRILDDEIRHVRFGTKHFSAVCEIRGESPPDAWKTLVAQHFRGA
IKPPFNDSARRSAGLSLDFMAGVA

Specific function: Unknown

COG id: COG2833

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007402
- InterPro:   IPR009078
- InterPro:   IPR011197 [H]

Pfam domain/function: PF04305 DUF455 [H]

EC number: NA

Molecular weight: Translated: 28889; Mature: 28889

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPQLSLAIREAMLTADPSAKVMATRNLVRRWRAGELAFAFDHPMPDVPARPEKPELLP
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC
PNAMPKRGRGGSERGRIALLHALAHIEFVAIDLALDAAGRFGAAMGRAFVDDWLSVAADE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
SMHYALLARRLRTLGSFYGAMPAHDGLWDAARETAHDVAARLAVVPMVLEARALDVTPMT
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VERFLAAGDERSARVLQRILDDEIRHVRFGTKHFSAVCEIRGESPPDAWKTLVAQHFRGA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
IKPPFNDSARRSAGLSLDFMAGVA
CCCCCCCCHHHHCCCCCHHHCCCC
>Mature Secondary Structure
MNAPQLSLAIREAMLTADPSAKVMATRNLVRRWRAGELAFAFDHPMPDVPARPEKPELLP
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC
PNAMPKRGRGGSERGRIALLHALAHIEFVAIDLALDAAGRFGAAMGRAFVDDWLSVAADE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
SMHYALLARRLRTLGSFYGAMPAHDGLWDAARETAHDVAARLAVVPMVLEARALDVTPMT
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VERFLAAGDERSARVLQRILDDEIRHVRFGTKHFSAVCEIRGESPPDAWKTLVAQHFRGA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
IKPPFNDSARRSAGLSLDFMAGVA
CCCCCCCCHHHHCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]