| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201168
Identifier: 87201168
GI number: 87201168
Start: 3368961
End: 3369755
Strand: Direct
Name: 87201168
Synonym: Saro_3156
Alternate gene names: NA
Gene position: 3368961-3369755 (Clockwise)
Preceding gene: 87201167
Following gene: 87201169
Centisome position: 94.59
GC content: 67.3
Gene sequence:
>795_bases ATGAACGCACCGCAACTCTCCCTCGCGATCCGCGAGGCGATGCTGACCGCCGATCCTTCGGCCAAGGTCATGGCCACGCG CAATCTCGTCCGTCGCTGGCGCGCGGGAGAGCTGGCGTTCGCCTTCGACCATCCCATGCCCGACGTGCCCGCCCGCCCGG AAAAGCCCGAACTGCTCCCGCCCAACGCCATGCCCAAGCGCGGGCGCGGCGGATCGGAGCGCGGGCGGATCGCGCTGCTC CATGCGCTGGCGCACATCGAATTCGTGGCGATCGACCTCGCGCTGGATGCGGCGGGCCGTTTTGGCGCTGCGATGGGGCG CGCGTTCGTCGACGACTGGCTGAGCGTAGCCGCCGATGAATCAATGCATTACGCGCTCCTGGCGCGCCGTCTGCGTACGC TCGGCAGCTTCTACGGCGCCATGCCCGCGCACGACGGTCTCTGGGATGCGGCGCGCGAAACCGCACACGACGTGGCGGCG CGGCTGGCGGTTGTGCCGATGGTCCTCGAAGCGCGCGCGCTCGACGTGACGCCGATGACCGTCGAGCGGTTTCTCGCGGC AGGGGACGAGCGGTCTGCCCGAGTGCTGCAACGAATCCTTGACGACGAAATCCGCCATGTGCGGTTCGGCACAAAACATT TCAGCGCAGTGTGCGAAATACGCGGAGAATCGCCGCCCGACGCGTGGAAAACCCTCGTCGCGCAGCACTTTCGCGGCGCC ATTAAGCCGCCGTTCAACGACTCGGCGCGTCGATCAGCCGGTTTGTCGCTCGATTTCATGGCAGGGGTTGCTTGA
Upstream 100 bases:
>100_bases CAAGGACCACGCCGCGCAAGTGCTTGCGGCGGCAAAAGCGCTGTGATCCGCCGCGTGACCCGAACGACACCTGACGACAC CTGACGGCACCGAACCGCAC
Downstream 100 bases:
>100_bases CCGCAACCGGCCCGTCTACCCCCAACACACGAGATGGCGGGGGGTTCCGACCAACTCTGAAACATCCCAAGGCGGTGGGC CAAAGCCTGCTCCTCGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MNAPQLSLAIREAMLTADPSAKVMATRNLVRRWRAGELAFAFDHPMPDVPARPEKPELLPPNAMPKRGRGGSERGRIALL HALAHIEFVAIDLALDAAGRFGAAMGRAFVDDWLSVAADESMHYALLARRLRTLGSFYGAMPAHDGLWDAARETAHDVAA RLAVVPMVLEARALDVTPMTVERFLAAGDERSARVLQRILDDEIRHVRFGTKHFSAVCEIRGESPPDAWKTLVAQHFRGA IKPPFNDSARRSAGLSLDFMAGVA
Sequences:
>Translated_264_residues MNAPQLSLAIREAMLTADPSAKVMATRNLVRRWRAGELAFAFDHPMPDVPARPEKPELLPPNAMPKRGRGGSERGRIALL HALAHIEFVAIDLALDAAGRFGAAMGRAFVDDWLSVAADESMHYALLARRLRTLGSFYGAMPAHDGLWDAARETAHDVAA RLAVVPMVLEARALDVTPMTVERFLAAGDERSARVLQRILDDEIRHVRFGTKHFSAVCEIRGESPPDAWKTLVAQHFRGA IKPPFNDSARRSAGLSLDFMAGVA >Mature_264_residues MNAPQLSLAIREAMLTADPSAKVMATRNLVRRWRAGELAFAFDHPMPDVPARPEKPELLPPNAMPKRGRGGSERGRIALL HALAHIEFVAIDLALDAAGRFGAAMGRAFVDDWLSVAADESMHYALLARRLRTLGSFYGAMPAHDGLWDAARETAHDVAA RLAVVPMVLEARALDVTPMTVERFLAAGDERSARVLQRILDDEIRHVRFGTKHFSAVCEIRGESPPDAWKTLVAQHFRGA IKPPFNDSARRSAGLSLDFMAGVA
Specific function: Unknown
COG id: COG2833
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007402 - InterPro: IPR009078 - InterPro: IPR011197 [H]
Pfam domain/function: PF04305 DUF455 [H]
EC number: NA
Molecular weight: Translated: 28889; Mature: 28889
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPQLSLAIREAMLTADPSAKVMATRNLVRRWRAGELAFAFDHPMPDVPARPEKPELLP CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC PNAMPKRGRGGSERGRIALLHALAHIEFVAIDLALDAAGRFGAAMGRAFVDDWLSVAADE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC SMHYALLARRLRTLGSFYGAMPAHDGLWDAARETAHDVAARLAVVPMVLEARALDVTPMT HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VERFLAAGDERSARVLQRILDDEIRHVRFGTKHFSAVCEIRGESPPDAWKTLVAQHFRGA HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC IKPPFNDSARRSAGLSLDFMAGVA CCCCCCCCHHHHCCCCCHHHCCCC >Mature Secondary Structure MNAPQLSLAIREAMLTADPSAKVMATRNLVRRWRAGELAFAFDHPMPDVPARPEKPELLP CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC PNAMPKRGRGGSERGRIALLHALAHIEFVAIDLALDAAGRFGAAMGRAFVDDWLSVAADE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC SMHYALLARRLRTLGSFYGAMPAHDGLWDAARETAHDVAARLAVVPMVLEARALDVTPMT HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VERFLAAGDERSARVLQRILDDEIRHVRFGTKHFSAVCEIRGESPPDAWKTLVAQHFRGA HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC IKPPFNDSARRSAGLSLDFMAGVA CCCCCCCCHHHHCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]