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The map label for this gene is ygaF [H]

Identifier: 87201167

GI number: 87201167

Start: 3368433

End: 3368906

Strand: Direct

Name: ygaF [H]

Synonym: Saro_3155

Alternate gene names: 87201167

Gene position: 3368433-3368906 (Clockwise)

Preceding gene: 87201166

Following gene: 87201168

Centisome position: 94.58

GC content: 62.03

Gene sequence:

>474_bases
ATGAGCGAACGGATCGGAGTGGGCGAGGCGTTTCCGGACATTGCGATGACGACGCCCGACGGCGGGAGTGTCAAGGCATC
CGACTTTGCCGGAAGGAAGCTGGTGGTGTTCTTCTATCCCAAGGACGATACTCCCGGCTGCACCACGGAAAACAAGGACT
TCTCAAGTCTCCACGCCGATTTCGAGGCCGCCGGCATCGCGGTCCTGGGGGTCAGCAAGGACCCGCCGAAGAAGCACCTT
AAGTTCGCCGAGAAGCACGCGCTGACCGCCCCGCTCGCCTCCGACGCGGAAGAAGGCGGCGTTTCGGATGCGCTTGGCAT
CTGGACCGAGAAGTCCATGTACGGGCGCACCTACATGGGCATGGAGCGCACGACCTATCTCGTTGGCGCGGATGGAAAGA
TCGCGCAGATCTGGAACAAGGTGAAGGTCAAGGACCACGCCGCGCAAGTGCTTGCGGCGGCAAAAGCGCTGTGA

Upstream 100 bases:

>100_bases
TGGAAAGCTGGGACGCGCTGCTCGGCGCGGTGCTGGAGGCGCGCCGACAGGTGGCCGTGGCATGGAAGCAAGTGTTTGAT
ATCGAACTGGAGATCGAAGG

Downstream 100 bases:

>100_bases
TCCGCCGCGTGACCCGAACGACACCTGACGACACCTGACGGCACCGAACCGCACATGAACGCACCGCAACTCTCCCTCGC
GATCCGCGAGGCGATGCTGA

Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MSERIGVGEAFPDIAMTTPDGGSVKASDFAGRKLVVFFYPKDDTPGCTTENKDFSSLHADFEAAGIAVLGVSKDPPKKHL
KFAEKHALTAPLASDAEEGGVSDALGIWTEKSMYGRTYMGMERTTYLVGADGKIAQIWNKVKVKDHAAQVLAAAKAL

Sequences:

>Translated_157_residues
MSERIGVGEAFPDIAMTTPDGGSVKASDFAGRKLVVFFYPKDDTPGCTTENKDFSSLHADFEAAGIAVLGVSKDPPKKHL
KFAEKHALTAPLASDAEEGGVSDALGIWTEKSMYGRTYMGMERTTYLVGADGKIAQIWNKVKVKDHAAQVLAAAKAL
>Mature_156_residues
SERIGVGEAFPDIAMTTPDGGSVKASDFAGRKLVVFFYPKDDTPGCTTENKDFSSLHADFEAAGIAVLGVSKDPPKKHLK
FAEKHALTAPLASDAEEGGVSDALGIWTEKSMYGRTYMGMERTTYLVGADGKIAQIWNKVKVKDHAAQVLAAAKAL

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788825, Length=148, Percent_Identity=39.1891891891892, Blast_Score=116, Evalue=9e-28,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 16751; Mature: 16620

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERIGVGEAFPDIAMTTPDGGSVKASDFAGRKLVVFFYPKDDTPGCTTENKDFSSLHAD
CCCCCCCCCCCCCCEEECCCCCCEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHCC
FEAAGIAVLGVSKDPPKKHLKFAEKHALTAPLASDAEEGGVSDALGIWTEKSMYGRTYMG
CCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEECC
MERTTYLVGADGKIAQIWNKVKVKDHAAQVLAAAKAL
CCCEEEEEECCCCHHHHHHHHCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SERIGVGEAFPDIAMTTPDGGSVKASDFAGRKLVVFFYPKDDTPGCTTENKDFSSLHAD
CCCCCCCCCCCCCEEECCCCCCEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHCC
FEAAGIAVLGVSKDPPKKHLKFAEKHALTAPLASDAEEGGVSDALGIWTEKSMYGRTYMG
CCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEECC
MERTTYLVGADGKIAQIWNKVKVKDHAAQVLAAAKAL
CCCEEEEEECCCCHHHHHHHHCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]