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The map label for this gene is dksA [H]

Identifier: 87201113

GI number: 87201113

Start: 3319699

End: 3320157

Strand: Reverse

Name: dksA [H]

Synonym: Saro_3101

Alternate gene names: 87201113

Gene position: 3320157-3319699 (Counterclockwise)

Preceding gene: 87201115

Following gene: 87201112

Centisome position: 93.22

GC content: 61.0

Gene sequence:

>459_bases
ATGGCTGGGGTCTTGAGTGACGAGATTGACGTTCTGGCAAAAGCGCGTCGTGCGATGCCGGGCGATTATGTTCCAAGCGA
CGACGAACCCTATATGAATGATGCCCAGCAGGACTATTTCCGTCGCCTGCTGCTGGAATGGAAGAAGTCGATCCTCTCGG
CCGCGGCGGGCACGCTGACCGCGCTCCAGGATGGTCCGATCCGCGAACCCGACCTCAACGACCGCGCCTCGAGCGAGACC
GACTGGGGCATCGAACTGCGCACACGCGATCGCCAGCGCAAGCTGATCGCCAAGATCGATTCCGCCATGCGCCGGATCGA
CGAAGGCGAATATGGTTACTGCGAAGTCACGGGTGAGCCCATCGGTCTGGGCCGACTGATCGCCCGGCCTATTGCCACGA
TGACCGTCGAGGCGCAGGAAGCCCATGAACGCAGGGAAAAAATTTCCCGGGACATGTGA

Upstream 100 bases:

>100_bases
AAGGGCCAACTCTATAGGCCCGCGACACGATGCTCGCGCGCCGAAGGGAAATAATGACGCGAGCCGGGAGGGGCGGATAG
CTTGTTATGCGGAGGGCCGA

Downstream 100 bases:

>100_bases
TTTTGCGGGCGTCTCGGCGAGGCGCCCCCAAACATGATAATCAGGTTAACGGATGCCCTTGTTAGGGGTTTTTTTACCCT
GCGCCTTCAGGATGCGTGGA

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MAGVLSDEIDVLAKARRAMPGDYVPSDDEPYMNDAQQDYFRRLLLEWKKSILSAAAGTLTALQDGPIREPDLNDRASSET
DWGIELRTRDRQRKLIAKIDSAMRRIDEGEYGYCEVTGEPIGLGRLIARPIATMTVEAQEAHERREKISRDM

Sequences:

>Translated_152_residues
MAGVLSDEIDVLAKARRAMPGDYVPSDDEPYMNDAQQDYFRRLLLEWKKSILSAAAGTLTALQDGPIREPDLNDRASSET
DWGIELRTRDRQRKLIAKIDSAMRRIDEGEYGYCEVTGEPIGLGRLIARPIATMTVEAQEAHERREKISRDM
>Mature_151_residues
AGVLSDEIDVLAKARRAMPGDYVPSDDEPYMNDAQQDYFRRLLLEWKKSILSAAAGTLTALQDGPIREPDLNDRASSETD
WGIELRTRDRQRKLIAKIDSAMRRIDEGEYGYCEVTGEPIGLGRLIARPIATMTVEAQEAHERREKISRDM

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=125, Percent_Identity=40.8, Blast_Score=104, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 17212; Mature: 17080

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVLSDEIDVLAKARRAMPGDYVPSDDEPYMNDAQQDYFRRLLLEWKKSILSAAAGTLT
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALQDGPIREPDLNDRASSETDWGIELRTRDRQRKLIAKIDSAMRRIDEGEYGYCEVTGEP
HHCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
IGLGRLIARPIATMTVEAQEAHERREKISRDM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AGVLSDEIDVLAKARRAMPGDYVPSDDEPYMNDAQQDYFRRLLLEWKKSILSAAAGTLT
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALQDGPIREPDLNDRASSETDWGIELRTRDRQRKLIAKIDSAMRRIDEGEYGYCEVTGEP
HHCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
IGLGRLIARPIATMTVEAQEAHERREKISRDM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9555902 [H]