| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201040
Identifier: 87201040
GI number: 87201040
Start: 3238746
End: 3240530
Strand: Direct
Name: 87201040
Synonym: Saro_3028
Alternate gene names: NA
Gene position: 3238746-3240530 (Clockwise)
Preceding gene: 87201038
Following gene: 87201041
Centisome position: 90.94
GC content: 66.78
Gene sequence:
>1785_bases ATGAGCGTGGCCGATACCGATACCCGCGAATCCGCAAGCCCGCGCCTCGGGCGCCTTGCCCGCAGCCGCATTGTCCAGTT CCTCGGGCTTTCCGCGCTTCCCGCCACGATCGCCCTTGCGCAAGCCGCGCGCGATCCTTCGAACCCGGTGGAGGCCGAAC CCGGCATCCCCGTGAAGGACCAGCTCGTCGTCGAAAAATGTGGCTCGTGCCATACCGCAGATGCGAAGGGGAACCTTTCG CGCATCTCCTGGGTGCGGACCACGCCCGAAGGCTGGGCACAGGTCATCCACCGCATGTCGCGCCTCAACGGCCTGTCGAT CTCCCCGGTCGAGGCCAAGGCCGTGATCCGCTCGCTCTCCGCCACCCACGGGCTGGCCCCGGAAGAAGCCAAGCCGGTCA TGTACCTGCCCGAGCATCGCCTGATCGACGAGACCAACATCCCGAACGAGACGATCCGGCAGTCTTGCGCATCGTGCCAC GCCTTCGCGCAGCCCCTGTCCTGGCGCCGGTCGAAGGCGGAATGGAGCCTGCTGCGCAATCTCCACGTCGCGCTCTATTC GCAGGCCGACGCGCAGTATCGCCGCGCCGTGGATGACCCGTCGCAGCCCGCTCCCGCGCCGGGCGCGACCAAGCCGCTGC CGGTCGAAGTCGCGATGGACTACATGAACAAGCACGCGCCCCTCGCCACGCCCGAATGGTCGGCATGGCAGGCCCGCGTC CAGTCGTCCAAGCTGGGCGGCCGTTGGCTGGTCAGCGCCTCGCTTCCCGGCAAGGGCAAGTACGTGGGCGAAATGGTGCT CGCGCCGGCAGCGTCGGGCGATGACTATTCGACAACGATCTCGCTCAAGTCCCTCGCCGATGGCTCCACCCTGACCCGCA AGGGCAAGGGGCTGGTCTATACCGGTTATGCCTGGCGCGGGACCTCCGCCAGTGGACCGGAAGGCGCCCGGCCCGATGCA CCCGAAGACCACGAAACGCGCGAGACGATGTGGTTCTCGCCCGATCGCAAGTCTGCCGAAGGACGCTGGTTCTGGGGCGA TTACAAGGAGTTCGGCTTCGACGTGAAGCTGACCCGCGCTTCGGCCGAACCAACCGTCACCGCCGTAATGCCCGGCGGGC TCAAGATCGGCACCAAGGGTGCAACCGTGCGCCTCTATGGCGATGCGTTCCCCGCCGGCCTCAAGGCGGCGGACATCGAT CTCGGCAAGGGCGTGATGGTCAGCAAGGTCGTGTCGGCCAGCCCGGGCGAGGCCGTTCTCACCGTCGACGTTGCTGCCGA CGCCACGGTCGGCGCCCATGACGTTGGAATCGGCAGCAGCGTGCTGGCCGCCGCGCTGCCGGTCTATCGCAAGGTCGATT ACCTCAAGGTCGCGCCGGATTCTGCCATCGCCCGCCTCGGCGGAAGCGAGAAGCACACGCCCGGCTACCAGCAGTTCGAG GCCATCGGCTACGACAACGGCCTCGACGGCAAGCCCTACACTGCCGACGACGTCGCCATCGGCCCGGTGGACGCGAGCTG GTCCATGGAAGAATTCCAGACCGTCTACTACGACGACGATACCAGCTACGTTGGCAAGCTCAGCGACAAGGCCCTGTTCA CCCCGGCGATGGACGGCCCCAATCCCGCGCGCAAGTGGGGCCGCAACAACTATGGCGAGGTCTGGGTCGTCGCCACCGCC AAGACGGAAAAGGACGCCCTGGGCAAGCCGTTGACGGCAAAATCCTTCATGGTTGTCTCGGTGCCCGCCTACAAGCGCTG GGATCAGCCGGAGGTGGCCAAGTGA
Upstream 100 bases:
>100_bases ACAAAGGCGTTGACCAACTTTTGACATCTGTCCAGTCTTTGCCTCGCAGCCACATCCGAATCGCACGATGCGGCACAGCC ATCAGGGGGAAAACGCGACC
Downstream 100 bases:
>100_bases CCACGGTCCTCGCCCCCCGCTATCGCCTTGGCGATATCCATACTTTCGAGGCTTCCGGCCAGGGCTTCGTCTATCTCGCA TCGGCCGGCGCGATCTTCGC
Product: quinohemoprotein amine dehydrogenase, 60 kDa subunit
Products: NA
Alternate protein names: Quinohemoprotein Amine Dehydrogenase Alpha Subunit; Quinohemoprotein Amine Dehydrogenase Subunit Alpha
Number of amino acids: Translated: 594; Mature: 593
Protein sequence:
>594_residues MSVADTDTRESASPRLGRLARSRIVQFLGLSALPATIALAQAARDPSNPVEAEPGIPVKDQLVVEKCGSCHTADAKGNLS RISWVRTTPEGWAQVIHRMSRLNGLSISPVEAKAVIRSLSATHGLAPEEAKPVMYLPEHRLIDETNIPNETIRQSCASCH AFAQPLSWRRSKAEWSLLRNLHVALYSQADAQYRRAVDDPSQPAPAPGATKPLPVEVAMDYMNKHAPLATPEWSAWQARV QSSKLGGRWLVSASLPGKGKYVGEMVLAPAASGDDYSTTISLKSLADGSTLTRKGKGLVYTGYAWRGTSASGPEGARPDA PEDHETRETMWFSPDRKSAEGRWFWGDYKEFGFDVKLTRASAEPTVTAVMPGGLKIGTKGATVRLYGDAFPAGLKAADID LGKGVMVSKVVSASPGEAVLTVDVAADATVGAHDVGIGSSVLAAALPVYRKVDYLKVAPDSAIARLGGSEKHTPGYQQFE AIGYDNGLDGKPYTADDVAIGPVDASWSMEEFQTVYYDDDTSYVGKLSDKALFTPAMDGPNPARKWGRNNYGEVWVVATA KTEKDALGKPLTAKSFMVVSVPAYKRWDQPEVAK
Sequences:
>Translated_594_residues MSVADTDTRESASPRLGRLARSRIVQFLGLSALPATIALAQAARDPSNPVEAEPGIPVKDQLVVEKCGSCHTADAKGNLS RISWVRTTPEGWAQVIHRMSRLNGLSISPVEAKAVIRSLSATHGLAPEEAKPVMYLPEHRLIDETNIPNETIRQSCASCH AFAQPLSWRRSKAEWSLLRNLHVALYSQADAQYRRAVDDPSQPAPAPGATKPLPVEVAMDYMNKHAPLATPEWSAWQARV QSSKLGGRWLVSASLPGKGKYVGEMVLAPAASGDDYSTTISLKSLADGSTLTRKGKGLVYTGYAWRGTSASGPEGARPDA PEDHETRETMWFSPDRKSAEGRWFWGDYKEFGFDVKLTRASAEPTVTAVMPGGLKIGTKGATVRLYGDAFPAGLKAADID LGKGVMVSKVVSASPGEAVLTVDVAADATVGAHDVGIGSSVLAAALPVYRKVDYLKVAPDSAIARLGGSEKHTPGYQQFE AIGYDNGLDGKPYTADDVAIGPVDASWSMEEFQTVYYDDDTSYVGKLSDKALFTPAMDGPNPARKWGRNNYGEVWVVATA KTEKDALGKPLTAKSFMVVSVPAYKRWDQPEVAK >Mature_593_residues SVADTDTRESASPRLGRLARSRIVQFLGLSALPATIALAQAARDPSNPVEAEPGIPVKDQLVVEKCGSCHTADAKGNLSR ISWVRTTPEGWAQVIHRMSRLNGLSISPVEAKAVIRSLSATHGLAPEEAKPVMYLPEHRLIDETNIPNETIRQSCASCHA FAQPLSWRRSKAEWSLLRNLHVALYSQADAQYRRAVDDPSQPAPAPGATKPLPVEVAMDYMNKHAPLATPEWSAWQARVQ SSKLGGRWLVSASLPGKGKYVGEMVLAPAASGDDYSTTISLKSLADGSTLTRKGKGLVYTGYAWRGTSASGPEGARPDAP EDHETRETMWFSPDRKSAEGRWFWGDYKEFGFDVKLTRASAEPTVTAVMPGGLKIGTKGATVRLYGDAFPAGLKAADIDL GKGVMVSKVVSASPGEAVLTVDVAADATVGAHDVGIGSSVLAAALPVYRKVDYLKVAPDSAIARLGGSEKHTPGYQQFEA IGYDNGLDGKPYTADDVAIGPVDASWSMEEFQTVYYDDDTSYVGKLSDKALFTPAMDGPNPARKWGRNNYGEVWVVATAK TEKDALGKPLTAKSFMVVSVPAYKRWDQPEVAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63829; Mature: 63698
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVADTDTRESASPRLGRLARSRIVQFLGLSALPATIALAQAARDPSNPVEAEPGIPVKD CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH QLVVEKCGSCHTADAKGNLSRISWVRTTPEGWAQVIHRMSRLNGLSISPVEAKAVIRSLS HHHHHHCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH ATHGLAPEEAKPVMYLPEHRLIDETNIPNETIRQSCASCHAFAQPLSWRRSKAEWSLLRN HHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHVALYSQADAQYRRAVDDPSQPAPAPGATKPLPVEVAMDYMNKHAPLATPEWSAWQARV HHHEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH QSSKLGGRWLVSASLPGKGKYVGEMVLAPAASGDDYSTTISLKSLADGSTLTRKGKGLVY HHCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEHHCCCCCCEEECCCCEEE TGYAWRGTSASGPEGARPDAPEDHETRETMWFSPDRKSAEGRWFWGDYKEFGFDVKLTRA ECEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCHHHCCCEEEEEEC SAEPTVTAVMPGGLKIGTKGATVRLYGDAFPAGLKAADIDLGKGVMVSKVVSASPGEAVL CCCCEEEEEECCCEEECCCCCEEEEECCCCCCCCEEECCCCCCCHHHHHHHCCCCCCEEE TVDVAADATVGAHDVGIGSSVLAAALPVYRKVDYLKVAPDSAIARLGGSEKHTPGYQQFE EEEECCCCCCCCHHCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHCCCCCCCCCCHHHHH AIGYDNGLDGKPYTADDVAIGPVDASWSMEEFQTVYYDDDTSYVGKLSDKALFTPAMDGP HCCCCCCCCCCCCCCCCEEECCCCCCCCHHHCEEEEECCCCHHHHCCCCCEEECCCCCCC NPARKWGRNNYGEVWVVATAKTEKDALGKPLTAKSFMVVSVPAYKRWDQPEVAK CHHHHCCCCCCCCEEEEEECCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure SVADTDTRESASPRLGRLARSRIVQFLGLSALPATIALAQAARDPSNPVEAEPGIPVKD CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH QLVVEKCGSCHTADAKGNLSRISWVRTTPEGWAQVIHRMSRLNGLSISPVEAKAVIRSLS HHHHHHCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH ATHGLAPEEAKPVMYLPEHRLIDETNIPNETIRQSCASCHAFAQPLSWRRSKAEWSLLRN HHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHVALYSQADAQYRRAVDDPSQPAPAPGATKPLPVEVAMDYMNKHAPLATPEWSAWQARV HHHEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH QSSKLGGRWLVSASLPGKGKYVGEMVLAPAASGDDYSTTISLKSLADGSTLTRKGKGLVY HHCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEHHCCCCCCEEECCCCEEE TGYAWRGTSASGPEGARPDAPEDHETRETMWFSPDRKSAEGRWFWGDYKEFGFDVKLTRA ECEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCHHHCCCEEEEEEC SAEPTVTAVMPGGLKIGTKGATVRLYGDAFPAGLKAADIDLGKGVMVSKVVSASPGEAVL CCCCEEEEEECCCEEECCCCCEEEEECCCCCCCCEEECCCCCCCHHHHHHHCCCCCCEEE TVDVAADATVGAHDVGIGSSVLAAALPVYRKVDYLKVAPDSAIARLGGSEKHTPGYQQFE EEEECCCCCCCCHHCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHCCCCCCCCCCHHHHH AIGYDNGLDGKPYTADDVAIGPVDASWSMEEFQTVYYDDDTSYVGKLSDKALFTPAMDGP HCCCCCCCCCCCCCCCCEEECCCCCCCCHHHCEEEEECCCCHHHHCCCCCEEECCCCCCC NPARKWGRNNYGEVWVVATAKTEKDALGKPLTAKSFMVVSVPAYKRWDQPEVAK CHHHHCCCCCCCCEEEEEECCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA