Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200994

Identifier: 87200994

GI number: 87200994

Start: 3199201

End: 3199644

Strand: Direct

Name: 87200994

Synonym: Saro_2982

Alternate gene names: NA

Gene position: 3199201-3199644 (Clockwise)

Preceding gene: 87200993

Following gene: 87200995

Centisome position: 89.83

GC content: 59.91

Gene sequence:

>444_bases
ATGATTGACCCGAACGAACTGGAGCGGTTGAGCAAGGCGGCCGAGAAGACCGAAGACGATATCCGCTATTACTCGGGCGG
ATCGAAATACAACGAACCGCTTGAGCAGCTTAAAGATCGGCTCGTACACCTCTACCGCACCAGCCAGCTTGTCCCCGTCC
AGCAGCCGAGCGAGCCCTACGCCCCCGCACAGAACTGTTTGGAAGTCCCACCAAATATCCTAAAATCGGGAAAGATGCTG
GCCGCGATGCGTAAATCTGCGCAGCCGAGCGGGGATGTGGTGGAAGCTGTGGCACGGGCGATCCGACGCGCCGAGATTGG
AGGCTTCTCGGATGAAGAAGTTGCGCAGGCTGTCGTGGATGGATCGTGGGAGCACAAGCAGCCTGCCGCCACCGCCGCCA
TCACCGCTTACGAAGCCCTTCGCGCAAAGGACACCCGCCCATGA

Upstream 100 bases:

>100_bases
ACGGCACAGAGATAACCCGCCAAGCCAAATGCGAAGAATGGCCTTGGGAGGAGAATGACCCCCTCCTCGACATCATCGCC
TACAAGCCCGAAGGAACCCC

Downstream 100 bases:

>100_bases
CCAATCCGAGAGAGGCGCTGGAAGAGGCGTGGCTGTCCATCCATCACGGGGGCTACCCACCGGAACGCGAGGACGACACA
TGCCGGAAGTGTGACCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MIDPNELERLSKAAEKTEDDIRYYSGGSKYNEPLEQLKDRLVHLYRTSQLVPVQQPSEPYAPAQNCLEVPPNILKSGKML
AAMRKSAQPSGDVVEAVARAIRRAEIGGFSDEEVAQAVVDGSWEHKQPAATAAITAYEALRAKDTRP

Sequences:

>Translated_147_residues
MIDPNELERLSKAAEKTEDDIRYYSGGSKYNEPLEQLKDRLVHLYRTSQLVPVQQPSEPYAPAQNCLEVPPNILKSGKML
AAMRKSAQPSGDVVEAVARAIRRAEIGGFSDEEVAQAVVDGSWEHKQPAATAAITAYEALRAKDTRP
>Mature_147_residues
MIDPNELERLSKAAEKTEDDIRYYSGGSKYNEPLEQLKDRLVHLYRTSQLVPVQQPSEPYAPAQNCLEVPPNILKSGKML
AAMRKSAQPSGDVVEAVARAIRRAEIGGFSDEEVAQAVVDGSWEHKQPAATAAITAYEALRAKDTRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16207; Mature: 16207

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDPNELERLSKAAEKTEDDIRYYSGGSKYNEPLEQLKDRLVHLYRTSQLVPVQQPSEPY
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
APAQNCLEVPPNILKSGKMLAAMRKSAQPSGDVVEAVARAIRRAEIGGFSDEEVAQAVVD
CCHHHHHHCCHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
GSWEHKQPAATAAITAYEALRAKDTRP
CCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIDPNELERLSKAAEKTEDDIRYYSGGSKYNEPLEQLKDRLVHLYRTSQLVPVQQPSEPY
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
APAQNCLEVPPNILKSGKMLAAMRKSAQPSGDVVEAVARAIRRAEIGGFSDEEVAQAVVD
CCHHHHHHCCHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
GSWEHKQPAATAAITAYEALRAKDTRP
CCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA