| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is yibF [C]
Identifier: 87200900
GI number: 87200900
Start: 3108322
End: 3109002
Strand: Reverse
Name: yibF [C]
Synonym: Saro_2887
Alternate gene names: 87200900
Gene position: 3109002-3108322 (Counterclockwise)
Preceding gene: 87200901
Following gene: 87200899
Centisome position: 87.29
GC content: 65.64
Gene sequence:
>681_bases ATGGAACCGCAACGCGATGGCGAGAGGACCTGCCTGGAACTCTTCGGGCATCCATTCTCGTCCTACACCTGGAAGGTCGA GATCGCCCTTTTCGCCAACGATACGCCCTATGCCTTCCGCCAGATCGACGGCCAGCACCCGGACAACGGGCTGCGCGTCG CTGCAGCCACGCCGATGGGCAAGTTCCCCCTGCTGGTCGATGGCGAGCGCGAGATCTTCGAGTCCACCGCCATCATCGAG TATGTCGCCGCCTGCCGGCCCGGCAAGGCGCCGCTGATTCCGTCCGATCCTTACGGGGCGGTGAAGGTGCGGATGATCGA CCGGGTGTTCGACAATTATGTCATGGCCCCCATGCAGGCGATCGTTTCCGCGCACATGCGCTCGCCCGACAATCCGGACC GGGAACGCATCGAGACCTCGTGCCGGGATCTGCGACGGACCTATCGCTGGCTGGAAGCATGGCTGGCCGACTATCCGCGC CCGGACACCATCTCGTTGATCGAATGCGCCGCCGCGCCGTCGCTGTTCTATGCCGACTGGGTATGCCCCCTGGCTGACGA GTTTCCGACCCTTGCCGCATGGCGCGCGCAACTCCTGCGCCAGCCAGCCGTAAGCCGCAGCGTCGAAGCGGCGAGGCCGT ACCGCGCGTTTTTCCCGCCCGGCGCGCCGGATCGCGATTGA
Upstream 100 bases:
>100_bases CCTGTCGTCCGCAAGCGGGTGTTCGAGGCGATGATGACCATGCGCAAGATCGACATCGCCGCGATCGAACGCGCCGCCAG CGGCATTGCCGGAGACTGAC
Downstream 100 bases:
>100_bases TCGAGGGAGCACCGATGCACGAACTTTCAATCAGCCGCCATATCGCCGCGCCGCCGGGAAAAGTCTGGGACGTTCTGGCG AACCGGCAGGAAGAATGGTG
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Ta Family; Glutathione S-Transferase C-Terminal Domain Protein; Glutathione S-Transferase Domain
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MEPQRDGERTCLELFGHPFSSYTWKVEIALFANDTPYAFRQIDGQHPDNGLRVAAATPMGKFPLLVDGEREIFESTAIIE YVAACRPGKAPLIPSDPYGAVKVRMIDRVFDNYVMAPMQAIVSAHMRSPDNPDRERIETSCRDLRRTYRWLEAWLADYPR PDTISLIECAAAPSLFYADWVCPLADEFPTLAAWRAQLLRQPAVSRSVEAARPYRAFFPPGAPDRD
Sequences:
>Translated_226_residues MEPQRDGERTCLELFGHPFSSYTWKVEIALFANDTPYAFRQIDGQHPDNGLRVAAATPMGKFPLLVDGEREIFESTAIIE YVAACRPGKAPLIPSDPYGAVKVRMIDRVFDNYVMAPMQAIVSAHMRSPDNPDRERIETSCRDLRRTYRWLEAWLADYPR PDTISLIECAAAPSLFYADWVCPLADEFPTLAAWRAQLLRQPAVSRSVEAARPYRAFFPPGAPDRD >Mature_226_residues MEPQRDGERTCLELFGHPFSSYTWKVEIALFANDTPYAFRQIDGQHPDNGLRVAAATPMGKFPLLVDGEREIFESTAIIE YVAACRPGKAPLIPSDPYGAVKVRMIDRVFDNYVMAPMQAIVSAHMRSPDNPDRERIETSCRDLRRTYRWLEAWLADYPR PDTISLIECAAAPSLFYADWVCPLADEFPTLAAWRAQLLRQPAVSRSVEAARPYRAFFPPGAPDRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25610; Mature: 25610
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPQRDGERTCLELFGHPFSSYTWKVEIALFANDTPYAFRQIDGQHPDNGLRVAAATPMG CCCCCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCHHHHHCCCCCCCCCEEEEEECCCC KFPLLVDGEREIFESTAIIEYVAACRPGKAPLIPSDPYGAVKVRMIDRVFDNYVMAPMQA CCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IVSAHMRSPDNPDRERIETSCRDLRRTYRWLEAWLADYPRPDTISLIECAAAPSLFYADW HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHH VCPLADEFPTLAAWRAQLLRQPAVSRSVEAARPYRAFFPPGAPDRD HCCHHHCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MEPQRDGERTCLELFGHPFSSYTWKVEIALFANDTPYAFRQIDGQHPDNGLRVAAATPMG CCCCCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCHHHHHCCCCCCCCCEEEEEECCCC KFPLLVDGEREIFESTAIIEYVAACRPGKAPLIPSDPYGAVKVRMIDRVFDNYVMAPMQA CCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IVSAHMRSPDNPDRERIETSCRDLRRTYRWLEAWLADYPRPDTISLIECAAAPSLFYADW HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHH VCPLADEFPTLAAWRAQLLRQPAVSRSVEAARPYRAFFPPGAPDRD HCCHHHCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA