| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200899
Identifier: 87200899
GI number: 87200899
Start: 3107867
End: 3108307
Strand: Reverse
Name: 87200899
Synonym: Saro_2886
Alternate gene names: NA
Gene position: 3108307-3107867 (Counterclockwise)
Preceding gene: 87200900
Following gene: 87200898
Centisome position: 87.27
GC content: 66.21
Gene sequence:
>441_bases ATGCACGAACTTTCAATCAGCCGCCATATCGCCGCGCCGCCGGGAAAAGTCTGGGACGTTCTGGCGAACCGGCAGGAAGA ATGGTGGTGCCCCCGGCCCTGGTGGATCACCCTGATCGCGCAGGAGCGGCGCCCCGGCGGTCGCAGTGCCATGGTGATGC ACGGCCCGGATGGCGAAGAGATGCCGCAGGAAGGCATTTTCCTCGCATGGGACGAAGGGCATCGCTTTGTCACGACCGAC GCGGTCACCGCCGACTTCCTGCCCGCCGGTCCCTTCATGGTCGGCATCTGGGAGGTCGAGCCGGAAGGCGAGGGCACGCG CTACACCGCCAGCGCCCGCCACTGGACCGAAGAAGCCATGCGCGAGCACGCCGAAATGGGCTTCGAGGCAGGCTGGAATG CCTGTGCGGACCAGTTGCAGGCGCTCTGCGAAGCCGATTGA
Upstream 100 bases:
>100_bases TGCGCCAGCCAGCCGTAAGCCGCAGCGTCGAAGCGGCGAGGCCGTACCGCGCGTTTTTCCCGCCCGGCGCGCCGGATCGC GATTGATCGAGGGAGCACCG
Downstream 100 bases:
>100_bases CGGGCGTCTACACCGCGCGCAAACTCATTGAAAACACAGGGTCGCGGCTCTTGGAGAGGGGCAGCGATGGCAGAGAGCTT GAAAACTTCGCCGGAACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Response Regulator Receiver Domain-Containing Protein; Conserved Hypothethical Protein; Hsp90 ATPase Activator Family Protein
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MHELSISRHIAAPPGKVWDVLANRQEEWWCPRPWWITLIAQERRPGGRSAMVMHGPDGEEMPQEGIFLAWDEGHRFVTTD AVTADFLPAGPFMVGIWEVEPEGEGTRYTASARHWTEEAMREHAEMGFEAGWNACADQLQALCEAD
Sequences:
>Translated_146_residues MHELSISRHIAAPPGKVWDVLANRQEEWWCPRPWWITLIAQERRPGGRSAMVMHGPDGEEMPQEGIFLAWDEGHRFVTTD AVTADFLPAGPFMVGIWEVEPEGEGTRYTASARHWTEEAMREHAEMGFEAGWNACADQLQALCEAD >Mature_146_residues MHELSISRHIAAPPGKVWDVLANRQEEWWCPRPWWITLIAQERRPGGRSAMVMHGPDGEEMPQEGIFLAWDEGHRFVTTD AVTADFLPAGPFMVGIWEVEPEGEGTRYTASARHWTEEAMREHAEMGFEAGWNACADQLQALCEAD
Specific function: Unknown
COG id: COG3832
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16546; Mature: 16546
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHELSISRHIAAPPGKVWDVLANRQEEWWCPRPWWITLIAQERRPGGRSAMVMHGPDGEE CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCC MPQEGIFLAWDEGHRFVTTDAVTADFLPAGPFMVGIWEVEPEGEGTRYTASARHWTEEAM CCCCCEEEEECCCCEEEEECCCEECCCCCCCEEEEEEEECCCCCCCEEECHHHHHHHHHH REHAEMGFEAGWNACADQLQALCEAD HHHHHCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MHELSISRHIAAPPGKVWDVLANRQEEWWCPRPWWITLIAQERRPGGRSAMVMHGPDGEE CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCC MPQEGIFLAWDEGHRFVTTDAVTADFLPAGPFMVGIWEVEPEGEGTRYTASARHWTEEAM CCCCCEEEEECCCCEEEEECCCEECCCCCCCEEEEEEEECCCCCCCEEECHHHHHHHHHH REHAEMGFEAGWNACADQLQALCEAD HHHHHCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA