Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200901

Identifier: 87200901

GI number: 87200901

Start: 3109004

End: 3109501

Strand: Reverse

Name: 87200901

Synonym: Saro_2888

Alternate gene names: NA

Gene position: 3109501-3109004 (Counterclockwise)

Preceding gene: 87200902

Following gene: 87200900

Centisome position: 87.31

GC content: 65.06

Gene sequence:

>498_bases
ATGACCGGCGCACCTCCGCTCACGATCTGCCTGTGGTACAAAGGCGATGCCGAGGAAGCGGCCAACTTCTACGCGGAAAC
CTTTCCCGACAGTCACGTCTCGGCCGTGTTTCGCGCGCCCTCCGATTTCCCGGGCGGCGGCGAGGGGACGGTCCTGACCG
TCGGGTTCACCGTCCTCGGCATTCCCTGCATCGGCCTCAACGGGGGGCCGCAGTTCCCCCACACCGAGGCGTTCTCCTTT
CAGGTGGCAACCGATACGCAGGAAGAGACGGACCGCCTCTGGAACGCCATCGTCGACAATGGCGGCGTCGAATCTGCCTG
TGGCTGGTGCAAGGACAAGTGGGGCCTGTCGTGGCAGATCACTCCCCGCCAGTTGACCGACGGCATGGCCCATCCCGATC
CTGTCGTCCGCAAGCGGGTGTTCGAGGCGATGATGACCATGCGCAAGATCGACATCGCCGCGATCGAACGCGCCGCCAGC
GGCATTGCCGGAGACTGA

Upstream 100 bases:

>100_bases
AGCGTCCCGAGTTTATCGCCTATCTCGAGCGCGTACGCGACCGTCCCGCCTATCGCGCGGCGAAGGCCGTCGATGGCAAG
CTCATCGCGGAGATGCAGGC

Downstream 100 bases:

>100_bases
CATGGAACCGCAACGCGATGGCGAGAGGACCTGCCTGGAACTCTTCGGGCATCCATTCTCGTCCTACACCTGGAAGGTCG
AGATCGCCCTTTTCGCCAAC

Product: 3-demethylubiquinone-9 3-methyltransferase

Products: NA

Alternate protein names: 3-Demethylubiquinone-9 3-Methyltransferase Family Protein; 3-Demethylubiquinone-9 3-Methyltransferase Domain Protein; 3-Demethylubiquinone-9 3-O-Methyltransferase; Methyltransferase; Signal Peptide; 3-Demethylubiquinone-93- Methyltransferase Protein; 3-Demethylubiquinone-9 3-Methyltransferase Family

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MTGAPPLTICLWYKGDAEEAANFYAETFPDSHVSAVFRAPSDFPGGGEGTVLTVGFTVLGIPCIGLNGGPQFPHTEAFSF
QVATDTQEETDRLWNAIVDNGGVESACGWCKDKWGLSWQITPRQLTDGMAHPDPVVRKRVFEAMMTMRKIDIAAIERAAS
GIAGD

Sequences:

>Translated_165_residues
MTGAPPLTICLWYKGDAEEAANFYAETFPDSHVSAVFRAPSDFPGGGEGTVLTVGFTVLGIPCIGLNGGPQFPHTEAFSF
QVATDTQEETDRLWNAIVDNGGVESACGWCKDKWGLSWQITPRQLTDGMAHPDPVVRKRVFEAMMTMRKIDIAAIERAAS
GIAGD
>Mature_164_residues
TGAPPLTICLWYKGDAEEAANFYAETFPDSHVSAVFRAPSDFPGGGEGTVLTVGFTVLGIPCIGLNGGPQFPHTEAFSFQ
VATDTQEETDRLWNAIVDNGGVESACGWCKDKWGLSWQITPRQLTDGMAHPDPVVRKRVFEAMMTMRKIDIAAIERAASG
IAGD

Specific function: Unknown

COG id: COG3865

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17781; Mature: 17650

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGAPPLTICLWYKGDAEEAANFYAETFPDSHVSAVFRAPSDFPGGGEGTVLTVGFTVLG
CCCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCEEEECHHHHC
IPCIGLNGGPQFPHTEAFSFQVATDTQEETDRLWNAIVDNGGVESACGWCKDKWGLSWQI
EEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEE
TPRQLTDGMAHPDPVVRKRVFEAMMTMRKIDIAAIERAASGIAGD
CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TGAPPLTICLWYKGDAEEAANFYAETFPDSHVSAVFRAPSDFPGGGEGTVLTVGFTVLG
CCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCEEEECHHHHC
IPCIGLNGGPQFPHTEAFSFQVATDTQEETDRLWNAIVDNGGVESACGWCKDKWGLSWQI
EEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEE
TPRQLTDGMAHPDPVVRKRVFEAMMTMRKIDIAAIERAASGIAGD
CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA