| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200901
Identifier: 87200901
GI number: 87200901
Start: 3109004
End: 3109501
Strand: Reverse
Name: 87200901
Synonym: Saro_2888
Alternate gene names: NA
Gene position: 3109501-3109004 (Counterclockwise)
Preceding gene: 87200902
Following gene: 87200900
Centisome position: 87.31
GC content: 65.06
Gene sequence:
>498_bases ATGACCGGCGCACCTCCGCTCACGATCTGCCTGTGGTACAAAGGCGATGCCGAGGAAGCGGCCAACTTCTACGCGGAAAC CTTTCCCGACAGTCACGTCTCGGCCGTGTTTCGCGCGCCCTCCGATTTCCCGGGCGGCGGCGAGGGGACGGTCCTGACCG TCGGGTTCACCGTCCTCGGCATTCCCTGCATCGGCCTCAACGGGGGGCCGCAGTTCCCCCACACCGAGGCGTTCTCCTTT CAGGTGGCAACCGATACGCAGGAAGAGACGGACCGCCTCTGGAACGCCATCGTCGACAATGGCGGCGTCGAATCTGCCTG TGGCTGGTGCAAGGACAAGTGGGGCCTGTCGTGGCAGATCACTCCCCGCCAGTTGACCGACGGCATGGCCCATCCCGATC CTGTCGTCCGCAAGCGGGTGTTCGAGGCGATGATGACCATGCGCAAGATCGACATCGCCGCGATCGAACGCGCCGCCAGC GGCATTGCCGGAGACTGA
Upstream 100 bases:
>100_bases AGCGTCCCGAGTTTATCGCCTATCTCGAGCGCGTACGCGACCGTCCCGCCTATCGCGCGGCGAAGGCCGTCGATGGCAAG CTCATCGCGGAGATGCAGGC
Downstream 100 bases:
>100_bases CATGGAACCGCAACGCGATGGCGAGAGGACCTGCCTGGAACTCTTCGGGCATCCATTCTCGTCCTACACCTGGAAGGTCG AGATCGCCCTTTTCGCCAAC
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3-Demethylubiquinone-9 3-Methyltransferase Family Protein; 3-Demethylubiquinone-9 3-Methyltransferase Domain Protein; 3-Demethylubiquinone-9 3-O-Methyltransferase; Methyltransferase; Signal Peptide; 3-Demethylubiquinone-93- Methyltransferase Protein; 3-Demethylubiquinone-9 3-Methyltransferase Family
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTGAPPLTICLWYKGDAEEAANFYAETFPDSHVSAVFRAPSDFPGGGEGTVLTVGFTVLGIPCIGLNGGPQFPHTEAFSF QVATDTQEETDRLWNAIVDNGGVESACGWCKDKWGLSWQITPRQLTDGMAHPDPVVRKRVFEAMMTMRKIDIAAIERAAS GIAGD
Sequences:
>Translated_165_residues MTGAPPLTICLWYKGDAEEAANFYAETFPDSHVSAVFRAPSDFPGGGEGTVLTVGFTVLGIPCIGLNGGPQFPHTEAFSF QVATDTQEETDRLWNAIVDNGGVESACGWCKDKWGLSWQITPRQLTDGMAHPDPVVRKRVFEAMMTMRKIDIAAIERAAS GIAGD >Mature_164_residues TGAPPLTICLWYKGDAEEAANFYAETFPDSHVSAVFRAPSDFPGGGEGTVLTVGFTVLGIPCIGLNGGPQFPHTEAFSFQ VATDTQEETDRLWNAIVDNGGVESACGWCKDKWGLSWQITPRQLTDGMAHPDPVVRKRVFEAMMTMRKIDIAAIERAASG IAGD
Specific function: Unknown
COG id: COG3865
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17781; Mature: 17650
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGAPPLTICLWYKGDAEEAANFYAETFPDSHVSAVFRAPSDFPGGGEGTVLTVGFTVLG CCCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCEEEECHHHHC IPCIGLNGGPQFPHTEAFSFQVATDTQEETDRLWNAIVDNGGVESACGWCKDKWGLSWQI EEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEE TPRQLTDGMAHPDPVVRKRVFEAMMTMRKIDIAAIERAASGIAGD CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TGAPPLTICLWYKGDAEEAANFYAETFPDSHVSAVFRAPSDFPGGGEGTVLTVGFTVLG CCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCEEEECHHHHC IPCIGLNGGPQFPHTEAFSFQVATDTQEETDRLWNAIVDNGGVESACGWCKDKWGLSWQI EEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEE TPRQLTDGMAHPDPVVRKRVFEAMMTMRKIDIAAIERAASGIAGD CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA