Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200898

Identifier: 87200898

GI number: 87200898

Start: 3106835

End: 3107800

Strand: Reverse

Name: 87200898

Synonym: Saro_2885

Alternate gene names: NA

Gene position: 3107800-3106835 (Counterclockwise)

Preceding gene: 87200899

Following gene: 87200897

Centisome position: 87.26

GC content: 70.08

Gene sequence:

>966_bases
ATGGCAGAGAGCTTGAAAACTTCGCCGGAACTGGCGGGCTTCACGGTCGACGAATGGCAGGCTCTCATGGGGCACGCGGC
GCCCTTTGCCGCATTGCGGGGCGAGACGCTGTTCCGCCAGGGCGATCCGCCCAGCGCTCTCTACCTTGTCGGCGAGGGCC
TTCTCGAGATCGAGACGCGCTTGCCCGGCGACGAGGCCGCCGTGATCAGCCGGATCGAGCCGGGGCAGATGGTCGGCGAA
TTCGCCTTGCTCGACGATGGCCCCCGCTCGGCCAATGTGCGCGCGGTCGATGCTTCCGCCGGGTTCGTCATCGCGCGCGA
CCGCTTCCGTGCCCTCCTGGCCGATGGATCACCCTGGGCATTCAGGCTCGGCACTGCCCTGCGTCGTCTCGTGGCGGCAC
GGACGCGCGCGACGCTTGAGCGGATCGTGGCCGAGGGCCTGTTCGATCCGCTGGGCTTGCGCCGCATTGCCTCTGGTCCC
CGACTCTCCGGAATGCCAGGCACAGATGTATCGGAACTGCTGGCGGGCCTCCCCCGGCTGGCGGGATGCGAGGGCATGGC
CGAAGCTGGCCAGCTGGAACTGGCCCCCGCGGGGAGCACCATCGCCGCGCCGAACGAGCCCCAGGACGGCTTGCGCGTGG
TGCTGCGCGGCGCGGTGCGGGCGGCGATCCCGCGCGGGGCGATGCAGGAACAGATTTTCGTGTTCGGCCCCGGCTGCTTC
GTCGGCCTGACCGGATACAGCGACGGAGGTGGCCAGCCGTTGCTCGTCTCGGCGGCCGAGGAGGCGCTGGTGCTGCATCT
TCGCGGCGACGACCTTGTCCGCGCGGCAGAGACGGCAGCGACCTGGTATCCGCCGCTGCTCCTGGCGATGGGCCGCCAAC
TCGTGCAGGACCAGCGCAAGGCGAACCGCCATCTTGGCCGCTCGCTCGCGCTGCTGCGCTTCAACCATGCGGGGGAGCCT
GCCTGA

Upstream 100 bases:

>100_bases
GGACCAGTTGCAGGCGCTCTGCGAAGCCGATTGACGGGCGTCTACACCGCGCGCAAACTCATTGAAAACACAGGGTCGCG
GCTCTTGGAGAGGGGCAGCG

Downstream 100 bases:

>100_bases
TGTGCCGCATTCTCGGCTATCTCGGCACGCCGGTCCTGCTGGAGGACCTGCTTTATGCGCCCGATTCCTCGCTGCTGAAC
CAGACCATCGGCGCGCAGAT

Product: cyclic nucleotide-binding protein domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MAESLKTSPELAGFTVDEWQALMGHAAPFAALRGETLFRQGDPPSALYLVGEGLLEIETRLPGDEAAVISRIEPGQMVGE
FALLDDGPRSANVRAVDASAGFVIARDRFRALLADGSPWAFRLGTALRRLVAARTRATLERIVAEGLFDPLGLRRIASGP
RLSGMPGTDVSELLAGLPRLAGCEGMAEAGQLELAPAGSTIAAPNEPQDGLRVVLRGAVRAAIPRGAMQEQIFVFGPGCF
VGLTGYSDGGGQPLLVSAAEEALVLHLRGDDLVRAAETAATWYPPLLLAMGRQLVQDQRKANRHLGRSLALLRFNHAGEP
A

Sequences:

>Translated_321_residues
MAESLKTSPELAGFTVDEWQALMGHAAPFAALRGETLFRQGDPPSALYLVGEGLLEIETRLPGDEAAVISRIEPGQMVGE
FALLDDGPRSANVRAVDASAGFVIARDRFRALLADGSPWAFRLGTALRRLVAARTRATLERIVAEGLFDPLGLRRIASGP
RLSGMPGTDVSELLAGLPRLAGCEGMAEAGQLELAPAGSTIAAPNEPQDGLRVVLRGAVRAAIPRGAMQEQIFVFGPGCF
VGLTGYSDGGGQPLLVSAAEEALVLHLRGDDLVRAAETAATWYPPLLLAMGRQLVQDQRKANRHLGRSLALLRFNHAGEP
A
>Mature_320_residues
AESLKTSPELAGFTVDEWQALMGHAAPFAALRGETLFRQGDPPSALYLVGEGLLEIETRLPGDEAAVISRIEPGQMVGEF
ALLDDGPRSANVRAVDASAGFVIARDRFRALLADGSPWAFRLGTALRRLVAARTRATLERIVAEGLFDPLGLRRIASGPR
LSGMPGTDVSELLAGLPRLAGCEGMAEAGQLELAPAGSTIAAPNEPQDGLRVVLRGAVRAAIPRGAMQEQIFVFGPGCFV
GLTGYSDGGGQPLLVSAAEEALVLHLRGDDLVRAAETAATWYPPLLLAMGRQLVQDQRKANRHLGRSLALLRFNHAGEPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33940; Mature: 33809

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS00889 CNMP_BINDING_2 ; PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESLKTSPELAGFTVDEWQALMGHAAPFAALRGETLFRQGDPPSALYLVGEGLLEIETR
CCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCHHHCCCCCCCEEEEECCCEEEEECC
LPGDEAAVISRIEPGQMVGEFALLDDGPRSANVRAVDASAGFVIARDRFRALLADGSPWA
CCCCHHHHHCCCCCHHHHHEEEEECCCCCCCCEEEEECCCCEEEEHHHHHHHHCCCCCHH
FRLGTALRRLVAARTRATLERIVAEGLFDPLGLRRIASGPRLSGMPGTDVSELLAGLPRL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHH
AGCEGMAEAGQLELAPAGSTIAAPNEPQDGLRVVLRGAVRAAIPRGAMQEQIFVFGPGCF
CCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCE
VGLTGYSDGGGQPLLVSAAEEALVLHLRGDDLVRAAETAATWYPPLLLAMGRQLVQDQRK
EEECCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANRHLGRSLALLRFNHAGEPA
HHHHHHHHEEEEEECCCCCCC
>Mature Secondary Structure 
AESLKTSPELAGFTVDEWQALMGHAAPFAALRGETLFRQGDPPSALYLVGEGLLEIETR
CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCHHHCCCCCCCEEEEECCCEEEEECC
LPGDEAAVISRIEPGQMVGEFALLDDGPRSANVRAVDASAGFVIARDRFRALLADGSPWA
CCCCHHHHHCCCCCHHHHHEEEEECCCCCCCCEEEEECCCCEEEEHHHHHHHHCCCCCHH
FRLGTALRRLVAARTRATLERIVAEGLFDPLGLRRIASGPRLSGMPGTDVSELLAGLPRL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHH
AGCEGMAEAGQLELAPAGSTIAAPNEPQDGLRVVLRGAVRAAIPRGAMQEQIFVFGPGCF
CCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCE
VGLTGYSDGGGQPLLVSAAEEALVLHLRGDDLVRAAETAATWYPPLLLAMGRQLVQDQRK
EEECCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANRHLGRSLALLRFNHAGEPA
HHHHHHHHEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA