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The map label for this gene is gcvT [H]

Identifier: 87200874

GI number: 87200874

Start: 3084044

End: 3085444

Strand: Reverse

Name: gcvT [H]

Synonym: Saro_2861

Alternate gene names: 87200874

Gene position: 3085444-3084044 (Counterclockwise)

Preceding gene: 87200877

Following gene: 87200873

Centisome position: 86.63

GC content: 62.88

Gene sequence:

>1401_bases
ATGGCGGCAAAGAACCTCGAAGAGGTAATCCAGCAGAACGGCAACGTCGTCGAAATGCTGCGCAATTCGCAGCTCGGCGC
TTATGTCTATCCGGTCGTTGCGCCGGAATTCTCGAACTGGCGTTCGGAACAGTGGGCATGGCAGCACAGCGCCGTGCTGT
TCGACCAGTCGCACCACATGGTGAACCTCTACATTCGCGGCAAGGATGCGCTGAAGCTCCTGTCGGACACCATGATCAAC
AGCCCGAAGGGCTGGACGGTCAACAAGGCCAAGCAGTACGTCCCGACCACGCCCTATGGCCACGTGATCGGCGACGGCAT
CATCTTCTGGGAAGAAGAGGAAAGCTTCACCTACGTCGGTCGCGCGCCCGCTTCGAACTGGCTGCGCTACCACGCCGCGA
CCGGCGGCTACGATTGCGAGATCGAGCTGGACGACCGTTCGCCGATGCGCCCGATGGGCAAGCCCGTCCGCCGCAAGGAA
TGGCGCTTCCAGATCCAGGGCCCCAACGCCTGGGCGGTGATCGAGAAGCTGCACGGCGGCCCGCTCGAACAGCTCAAGTT
CTTCAACATGAGCACCATGAACATCGCCGGCAAGACCGTGCGCACCCTGCGCCACGGCATGTCGGGCGCGCCGGGCCTCG
AAATCTGGGGTCCCTATGACGAGCAGGAAGAAATCCGCGCCGCGATCCTCGAAGCCGGCAAGGAATTCGGCCTGATTGCC
TGCGGCAGCCGCGCCTATCCGTCGAACACGCTCGAATCGGGCTGGATCCCCTCGCCGCTGCCCGCCATCTACACCGGCGA
AAAGCTCAAGGGCTTCCGCGAATGGCTCGCGGCGGACAGCTACGAAGCCACCGGTTCGATCGGCGGTTCGTTCGTCTCGG
ACAACATCGAGGACTACTACCTCAATCCGTGGGAACTGGGTTACGGCAACTTCGTGAAGTTCGACCATGACTTCCACGGT
CGCGAAGCCCTCGAAGCCCTCAACCCGGCCGAGCAGCGCAAGAAGGTGACGCTCGCCTGGAACCCCGAGGACATGGCCAA
GATCATGGCCTCGCTGTTCAATCCCGATGGCGACCAGTACAAGTTCTTCGACACCCCGCTCGCGAACTATGCCTCGTCGA
ACTACGACCGCGTCGTCGATGCGGGCGGCAAGACCGTCGGCTTCTCGATGTTCACCGGCTACTCGTACAACGAGAAGCAG
GCGCTTTCGCTCGCCACGATCGATCCGGAAATCCCGGTCGGCACCGAGCTGCGCGTCGTGTGGGGTGAAGAGAACGGCGG
CACCCGCAAGACCACTGTCGAGCCGCACAAGCAGATCGAGGTCCGCGCGATCGTTTCGCCGGTCCCCTACAGCCGCGTCG
CTCGCGAAAACTACGCCGAAGGCTGGCGCACCGCTCGCTAA

Upstream 100 bases:

>100_bases
CTCATAGGGCGCAACATTTGCCATTGCGAATCTCTTCCAAACTTGTATGTGTTGCATACAAATTTTTCAACCTGCCATTT
TCAAGTCGGGAGAGTCAGTC

Downstream 100 bases:

>100_bases
GGCAGACCCGCGCCGCCCGGACCGCCACAATGGCGGCCGGGCGGACCGGTTTCATCAACAGAGGATCCCGAACATGGCCA
AGGCATCGCTCATCCATCCC

Product: aminomethyltransferase

Products: NA

Alternate protein names: Glycine cleavage system T protein [H]

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MAAKNLEEVIQQNGNVVEMLRNSQLGAYVYPVVAPEFSNWRSEQWAWQHSAVLFDQSHHMVNLYIRGKDALKLLSDTMIN
SPKGWTVNKAKQYVPTTPYGHVIGDGIIFWEEEESFTYVGRAPASNWLRYHAATGGYDCEIELDDRSPMRPMGKPVRRKE
WRFQIQGPNAWAVIEKLHGGPLEQLKFFNMSTMNIAGKTVRTLRHGMSGAPGLEIWGPYDEQEEIRAAILEAGKEFGLIA
CGSRAYPSNTLESGWIPSPLPAIYTGEKLKGFREWLAADSYEATGSIGGSFVSDNIEDYYLNPWELGYGNFVKFDHDFHG
REALEALNPAEQRKKVTLAWNPEDMAKIMASLFNPDGDQYKFFDTPLANYASSNYDRVVDAGGKTVGFSMFTGYSYNEKQ
ALSLATIDPEIPVGTELRVVWGEENGGTRKTTVEPHKQIEVRAIVSPVPYSRVARENYAEGWRTAR

Sequences:

>Translated_466_residues
MAAKNLEEVIQQNGNVVEMLRNSQLGAYVYPVVAPEFSNWRSEQWAWQHSAVLFDQSHHMVNLYIRGKDALKLLSDTMIN
SPKGWTVNKAKQYVPTTPYGHVIGDGIIFWEEEESFTYVGRAPASNWLRYHAATGGYDCEIELDDRSPMRPMGKPVRRKE
WRFQIQGPNAWAVIEKLHGGPLEQLKFFNMSTMNIAGKTVRTLRHGMSGAPGLEIWGPYDEQEEIRAAILEAGKEFGLIA
CGSRAYPSNTLESGWIPSPLPAIYTGEKLKGFREWLAADSYEATGSIGGSFVSDNIEDYYLNPWELGYGNFVKFDHDFHG
REALEALNPAEQRKKVTLAWNPEDMAKIMASLFNPDGDQYKFFDTPLANYASSNYDRVVDAGGKTVGFSMFTGYSYNEKQ
ALSLATIDPEIPVGTELRVVWGEENGGTRKTTVEPHKQIEVRAIVSPVPYSRVARENYAEGWRTAR
>Mature_465_residues
AAKNLEEVIQQNGNVVEMLRNSQLGAYVYPVVAPEFSNWRSEQWAWQHSAVLFDQSHHMVNLYIRGKDALKLLSDTMINS
PKGWTVNKAKQYVPTTPYGHVIGDGIIFWEEEESFTYVGRAPASNWLRYHAATGGYDCEIELDDRSPMRPMGKPVRRKEW
RFQIQGPNAWAVIEKLHGGPLEQLKFFNMSTMNIAGKTVRTLRHGMSGAPGLEIWGPYDEQEEIRAAILEAGKEFGLIAC
GSRAYPSNTLESGWIPSPLPAIYTGEKLKGFREWLAADSYEATGSIGGSFVSDNIEDYYLNPWELGYGNFVKFDHDFHGR
EALEALNPAEQRKKVTLAWNPEDMAKIMASLFNPDGDQYKFFDTPLANYASSNYDRVVDAGGKTVGFSMFTGYSYNEKQA
LSLATIDPEIPVGTELRVVWGEENGGTRKTTVEPHKQIEVRAIVSPVPYSRVARENYAEGWRTAR

Specific function: The glycine cleavage system catalyzes the degradation of glycine [H]

COG id: COG0404

COG function: function code E; Glycine cleavage system T protein (aminomethyltransferase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcvT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013977
- InterPro:   IPR006222
- InterPro:   IPR006223
- InterPro:   IPR022903 [H]

Pfam domain/function: PF01571 GCV_T; PF08669 GCV_T_C [H]

EC number: =2.1.2.10 [H]

Molecular weight: Translated: 52505; Mature: 52374

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAKNLEEVIQQNGNVVEMLRNSQLGAYVYPVVAPEFSNWRSEQWAWQHSAVLFDQSHHM
CCCCCHHHHHHCCCCEEEHHHCCCCCEEEEEEECCCCCCCCCCHHCCCCCEEEEECCCCE
VNLYIRGKDALKLLSDTMINSPKGWTVNKAKQYVPTTPYGHVIGDGIIFWEEEESFTYVG
EEEEEECHHHHHHHHHHHCCCCCCCEECCHHCCCCCCCCCCEECCCEEEEECCCCEEEEE
RAPASNWLRYHAATGGYDCEIELDDRSPMRPMGKPVRRKEWRFQIQGPNAWAVIEKLHGG
CCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEHHHHHCCC
PLEQLKFFNMSTMNIAGKTVRTLRHGMSGAPGLEIWGPYDEQEEIRAAILEAGKEFGLIA
CHHHHEEECCCEEHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCEEE
CGSRAYPSNTLESGWIPSPLPAIYTGEKLKGFREWLAADSYEATGSIGGSFVSDNIEDYY
ECCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCEE
LNPWELGYGNFVKFDHDFHGREALEALNPAEQRKKVTLAWNPEDMAKIMASLFNPDGDQY
CCCEECCCCCEEEECCCCCHHHHHHHCCCHHHCCEEEEEECHHHHHHHHHHHHCCCCCCE
KFFDTPLANYASSNYDRVVDAGGKTVGFSMFTGYSYNEKQALSLATIDPEIPVGTELRVV
EEECCCHHHHHCCCCCHHCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEE
WGEENGGTRKTTVEPHKQIEVRAIVSPVPYSRVARENYAEGWRTAR
EECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AAKNLEEVIQQNGNVVEMLRNSQLGAYVYPVVAPEFSNWRSEQWAWQHSAVLFDQSHHM
CCCCHHHHHHCCCCEEEHHHCCCCCEEEEEEECCCCCCCCCCHHCCCCCEEEEECCCCE
VNLYIRGKDALKLLSDTMINSPKGWTVNKAKQYVPTTPYGHVIGDGIIFWEEEESFTYVG
EEEEEECHHHHHHHHHHHCCCCCCCEECCHHCCCCCCCCCCEECCCEEEEECCCCEEEEE
RAPASNWLRYHAATGGYDCEIELDDRSPMRPMGKPVRRKEWRFQIQGPNAWAVIEKLHGG
CCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEHHHHHCCC
PLEQLKFFNMSTMNIAGKTVRTLRHGMSGAPGLEIWGPYDEQEEIRAAILEAGKEFGLIA
CHHHHEEECCCEEHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCEEE
CGSRAYPSNTLESGWIPSPLPAIYTGEKLKGFREWLAADSYEATGSIGGSFVSDNIEDYY
ECCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCEE
LNPWELGYGNFVKFDHDFHGREALEALNPAEQRKKVTLAWNPEDMAKIMASLFNPDGDQY
CCCEECCCCCEEEECCCCCHHHHHHHCCCHHHCCEEEEEECHHHHHHHHHHHHCCCCCCE
KFFDTPLANYASSNYDRVVDAGGKTVGFSMFTGYSYNEKQALSLATIDPEIPVGTELRVV
EEECCCHHHHHCCCCCHHCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEE
WGEENGGTRKTTVEPHKQIEVRAIVSPVPYSRVARENYAEGWRTAR
EECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]