| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200877
Identifier: 87200877
GI number: 87200877
Start: 3087013
End: 3087750
Strand: Reverse
Name: 87200877
Synonym: Saro_2864
Alternate gene names: NA
Gene position: 3087750-3087013 (Counterclockwise)
Preceding gene: 87200878
Following gene: 87200874
Centisome position: 86.7
GC content: 66.4
Gene sequence:
>738_bases ATGGCCGGCTTCGTCCTGATCCATGGTTCCTGGCATGGTGGCTGGTGCTTCGATCCCGTCGCCGAAATCCTGCGCGCGCG CGGCCACACGGTCGTCGCGCCGACGCTGCCCGGGATGGGAGGCACGGCGGAGGAAATGGCGGCGGTCACGCTGGATGGCT GGGGCGAATTTGCTGCGCAGCATTGTCGCGACCTGAAGGCACGGGGCGTCGGCCCCGTGGTCCTCGCCGGCCACTCGCGC GGAGGCCTTGTCGTCTCCACCGCGGCCGAGCGCGACCCTTCCGCGATGGACGCCATCGTCTACATATGCGCGATGATGCT GCCCTCGGGCATGAGTCGCGCCGGGTTCAAGGAACTGGAAGGCCCGAACCCCGCTTTCGACGCGATCATCTCGAAGGTTC ACGGCGGCATCGCCACGGTCATCGACACGCAGAATGCTGCACCGGTCTTTGCACAAATTTCGCCGCCCGATCTGGTCGAG GCGGCAATGGCAAGGCTCGTGGCCGAACCCCATGCTCCGCGTTCGCAGCAGATCAAGGTCACGCCGGAACGCTGGGGCAG CCTCCCGCGCACTTACGTCGAATGCACGCTCGACCGCACCATTCCGATCGAAAGCCAGCGCCGCATGATCGCGATGTCGC CGGGTGCGAACGTGGTGACTCTGGAGGCGGACCACAGTCCCTATCTGTCGAAACCGCAGGAACTGGCCGAGGCGCTGGAA GCGGCCATTCCCGCCTGA
Upstream 100 bases:
>100_bases GGCGTGATCGCGTTGCCGCGCGGCCTGCCGTCGCCGAAGCGCTGAAAAGCGAAGACCGCACTGCGCCCGGGCTGCGCGTC TGGTCGGGAGAAGTGCGCTG
Downstream 100 bases:
>100_bases TCCAGACTACCCGCCGTTATCCAAACTTCCCACCGGTCGTGTCGAGCGAAGTCGAGACACCTTGGCGCTGACTTTGCTCG ACACGACCGGAAAGAAGGCC
Product: alpha/beta hydrolase
Products: NA
Alternate protein names: Esterase EstC; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold; Hydrolase; Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Superfamily Protein; Salicylate Esterase; Hydrolase Alpha/Beta Fold Family Protein; Alkyl Salicylate Esterase; Alpha/Beta Hydrolase Fold-Containing Protein; Estc Protein; Lysophospholipase; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily; Signal Peptide Protein
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MAGFVLIHGSWHGGWCFDPVAEILRARGHTVVAPTLPGMGGTAEEMAAVTLDGWGEFAAQHCRDLKARGVGPVVLAGHSR GGLVVSTAAERDPSAMDAIVYICAMMLPSGMSRAGFKELEGPNPAFDAIISKVHGGIATVIDTQNAAPVFAQISPPDLVE AAMARLVAEPHAPRSQQIKVTPERWGSLPRTYVECTLDRTIPIESQRRMIAMSPGANVVTLEADHSPYLSKPQELAEALE AAIPA
Sequences:
>Translated_245_residues MAGFVLIHGSWHGGWCFDPVAEILRARGHTVVAPTLPGMGGTAEEMAAVTLDGWGEFAAQHCRDLKARGVGPVVLAGHSR GGLVVSTAAERDPSAMDAIVYICAMMLPSGMSRAGFKELEGPNPAFDAIISKVHGGIATVIDTQNAAPVFAQISPPDLVE AAMARLVAEPHAPRSQQIKVTPERWGSLPRTYVECTLDRTIPIESQRRMIAMSPGANVVTLEADHSPYLSKPQELAEALE AAIPA >Mature_244_residues AGFVLIHGSWHGGWCFDPVAEILRARGHTVVAPTLPGMGGTAEEMAAVTLDGWGEFAAQHCRDLKARGVGPVVLAGHSRG GLVVSTAAERDPSAMDAIVYICAMMLPSGMSRAGFKELEGPNPAFDAIISKVHGGIATVIDTQNAAPVFAQISPPDLVEA AMARLVAEPHAPRSQQIKVTPERWGSLPRTYVECTLDRTIPIESQRRMIAMSPGANVVTLEADHSPYLSKPQELAEALEA AIPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25920; Mature: 25789
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGFVLIHGSWHGGWCFDPVAEILRARGHTVVAPTLPGMGGTAEEMAAVTLDGWGEFAAQ CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHEEEEECCHHHHHHH HCRDLKARGVGPVVLAGHSRGGLVVSTAAERDPSAMDAIVYICAMMLPSGMSRAGFKELE HHHHHHHCCCCCEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCC GPNPAFDAIISKVHGGIATVIDTQNAAPVFAQISPPDLVEAAMARLVAEPHAPRSQQIKV CCCHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEE TPERWGSLPRTYVECTLDRTIPIESQRRMIAMSPGANVVTLEADHSPYLSKPQELAEALE CHHHHCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHH AAIPA HHCCC >Mature Secondary Structure AGFVLIHGSWHGGWCFDPVAEILRARGHTVVAPTLPGMGGTAEEMAAVTLDGWGEFAAQ CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHEEEEECCHHHHHHH HCRDLKARGVGPVVLAGHSRGGLVVSTAAERDPSAMDAIVYICAMMLPSGMSRAGFKELE HHHHHHHCCCCCEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCC GPNPAFDAIISKVHGGIATVIDTQNAAPVFAQISPPDLVEAAMARLVAEPHAPRSQQIKV CCCHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEE TPERWGSLPRTYVECTLDRTIPIESQRRMIAMSPGANVVTLEADHSPYLSKPQELAEALE CHHHHCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHH AAIPA HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA