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The map label for this gene is gatC

Identifier: 87200846

GI number: 87200846

Start: 3061357

End: 3061659

Strand: Reverse

Name: gatC

Synonym: Saro_2833

Alternate gene names: 87200846

Gene position: 3061659-3061357 (Counterclockwise)

Preceding gene: 87200847

Following gene: 87200845

Centisome position: 85.96

GC content: 67.0

Gene sequence:

>303_bases
ATGTCCGTAGATACCGCCACCGTGGCGAAGATCGCCTCGCTGGCCCGCATCAAGGTTTCCGAGGCCGAGCTTGGCGCGAT
GGTCCCCGAACTCAACGGCATCCTCGCCTGGGTCGAGCAGCTCGGCGAAGTCGACGTGACCGGGATCGAGCCGATGACCG
CCGTCATCCCCAACAAGCAGCGCCTGCGCGACGACGTGGTCAACGCCGACCCGCTGACCGGCGGCGACATGCGCGATGCC
GTCCTGGCCAACGCGCCCGCCCCCGAACACGGCTTCTTCGGCGTGCCCAAGGTGATCGAATAA

Upstream 100 bases:

>100_bases
CGCCCTTCGGGGCGGCCTCGGCTTGAAGCACGCCGCGCGCTCTGGTAGCGCGCGGCGTTCCTTTTTCCCGCTTTCGCTTC
TCCTGGGAGAGTATTCGCCC

Downstream 100 bases:

>100_bases
TGACCAATCTTACTGATCTCGGCATTGCCGCCATCCGCGATGGCGTGGCGCGGGGCGATTTCACCGCGACCGAAGTCGCC
ACCGCGTTCAACGCGGCGGT

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MSVDTATVAKIASLARIKVSEAELGAMVPELNGILAWVEQLGEVDVTGIEPMTAVIPNKQRLRDDVVNADPLTGGDMRDA
VLANAPAPEHGFFGVPKVIE

Sequences:

>Translated_100_residues
MSVDTATVAKIASLARIKVSEAELGAMVPELNGILAWVEQLGEVDVTGIEPMTAVIPNKQRLRDDVVNADPLTGGDMRDA
VLANAPAPEHGFFGVPKVIE
>Mature_99_residues
SVDTATVAKIASLARIKVSEAELGAMVPELNGILAWVEQLGEVDVTGIEPMTAVIPNKQRLRDDVVNADPLTGGDMRDAV
LANAPAPEHGFFGVPKVIE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_NOVAD (Q2G4F4)

Other databases:

- EMBL:   CP000248
- RefSeq:   YP_498103.1
- ProteinModelPortal:   Q2G4F4
- SMR:   Q2G4F4
- STRING:   Q2G4F4
- GeneID:   3915472
- GenomeReviews:   CP000248_GR
- KEGG:   nar:Saro_2833
- NMPDR:   fig|48935.1.peg.288
- eggNOG:   COG0721
- HOGENOM:   HBG586403
- OMA:   APEREDH
- ProtClustDB:   PRK00034
- BioCyc:   NARO279238:SARO_2833-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10549; Mature: 10418

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVDTATVAKIASLARIKVSEAELGAMVPELNGILAWVEQLGEVDVTGIEPMTAVIPNKQ
CCCCHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHH
RLRDDVVNADPLTGGDMRDAVLANAPAPEHGFFGVPKVIE
HHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVDTATVAKIASLARIKVSEAELGAMVPELNGILAWVEQLGEVDVTGIEPMTAVIPNKQ
CCCHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHH
RLRDDVVNADPLTGGDMRDAVLANAPAPEHGFFGVPKVIE
HHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA