| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200836
Identifier: 87200836
GI number: 87200836
Start: 3046851
End: 3048119
Strand: Reverse
Name: 87200836
Synonym: Saro_2823
Alternate gene names: NA
Gene position: 3048119-3046851 (Counterclockwise)
Preceding gene: 87200837
Following gene: 87200829
Centisome position: 85.58
GC content: 67.38
Gene sequence:
>1269_bases ATGCTGCGCTATCTGCTTCCGCTTGTCGCCCTGATCCCTGCAACCGCCAGTGCCGAGACGCTTTACGTGCGTGCCGGGCG GCTGGTCGACCCCGAGGCGGGCAAGGTGCTGACGGGCCAGGTGCTCACGGTCGAGGACGGGCGGGTTGTTTCGGTGCAGG GGGACGGGCCGTTGCCGCAAGGGGCGAAGGTGGTGGACTGGTCGGGGTTTACGGTCCTGCCGGGGCTGATCGATTGCCAT GTGCATCTGGCCGACGTGGAGCAATCGAACAACGTGGCCGAGCCGCTGCTCCATTCGGCGATGGAGATCGGGTTCATCGG TGCGAGGAATGCGAAGAAAACGCTGCTGGCCGGTTTCACCACGGTCCACGATGTCGGGAGTTTCCGCGCCTATGCCGACG TCGAACTGCGCAATGCGATCAACCGGGGAGATGTGCCGGGCCCGCGGGTGAGCGCGGTGGGGGCCTATGTTACGATCCCC GGCGGCGGGGGCGAGGTGACCGGGTTCGCGCCCGACGTGACGGTGCCGGCCGACATGCGCGCGGGCGTCGTGAACGATGC GGCCGACGTGACCCGCAAGGTCAATGCGCTGTTCCAGAACGGCGCGGATTCGATCAAGTTGATCGCGACGGGCGCGGTGC TGGCGCAGGGGACCGAGCCGGGGCAGATCGAGCTTTCGGGCGAGATGATGAAGGCGGCGGTGGACGTTGCCCGCCAGCGC GGATCATGGGTGACCGCCCATGCCCATGGTGCGGCGGGGATCAAGCTTGCCATCCAGTCCGGCGTCAAGGCGATCGAGCA TGCGAGCCTGATCGACGACGAAGGGATCGCGCTGGCCAGGGCGCGGGGCGTGTGGCTCGACATGGATATCTACAACGGCG ACTTCATTGCCGAGGTGGGCAAGCGCGATGGCTGGCCCGCCGACATGCTGCGCAAGAACGACGAGACGACCGAAGCGCAG CGGGAGGGCTTTCGCAAGGCGGTGAAGGCGGGCGTCAGGTTGAGCTACGGCACGGATGCGGGGGTCTTTCCGCACGGGCT GAACGCGCGACAGTTCAGGTACATGGTGCGATACGGGATGACGCCGATGCAGGCGATCCAGTCTGCGACGACCGTGGCGG CCGATCTGCTGGGGTGGAGCCGCGACGTGGGCGCGCTGTCGCCCGGCCACTATGCCGACATGATCGCGGTGGCGGGCGAT CCGCTGGCCGACGTGAGCGTGCTGGAGAACGTCGCGCACGTGATGAAGGGCGGCGAGGTGGTGCGCTAA
Upstream 100 bases:
>100_bases GCGTTTAACCTATTTGGTTTGTTTTGTCAAGGGGGCGACATTTGGATTGGCGTGGCAGGGGGAGATTGCGCTCCGGTTCG GGGGCGGTAGTCTCTGTCCC
Downstream 100 bases:
>100_bases AAGGAGGGGGCGGCCTTGCGGGACCGCCCCCCAGGGGATTGCCGGCAGGGAGAGGGGCCAGCAGGGTCGGGTTACATGAG CTTCCAGGTGAAGGGCACGA
Product: amidohydrolase
Products: NA
Alternate protein names: Prolidase; Amidohydrolase Family Protein; Xaa-Pro Dipeptidase; Imidazolonepropionase; Secreted Hydrolase; Xaa-Pro Dipeptidase Family; Amidohydrolase Family; M38 Family Peptidase; Aryldialkylphosphatase Related Protein; Amidohydrolase Domain Protein; Imidazolonepropionase Related Amidohydrolase; Metal-Dependent Amidohydrolase; Parathion Hydrolase; X-Pro Dipeptidase; Aryldialkylphosphatase; Metallo-Dependent Hydrolase; Amidase; Metal-Dependent Hydrolase; Pro-Hyp Dipeptidase; Exported Adenine Deaminase-Like Amidohydrolase; Dipeptidase; Aryldialkylphosphatase-Related Protein; M38 Familypeptidase; Amidohydrolase Imidazolonepropionase; Xaa-Arg/Lys Peptidase; Amidohydrolase Domain-Containing Protein
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MLRYLLPLVALIPATASAETLYVRAGRLVDPEAGKVLTGQVLTVEDGRVVSVQGDGPLPQGAKVVDWSGFTVLPGLIDCH VHLADVEQSNNVAEPLLHSAMEIGFIGARNAKKTLLAGFTTVHDVGSFRAYADVELRNAINRGDVPGPRVSAVGAYVTIP GGGGEVTGFAPDVTVPADMRAGVVNDAADVTRKVNALFQNGADSIKLIATGAVLAQGTEPGQIELSGEMMKAAVDVARQR GSWVTAHAHGAAGIKLAIQSGVKAIEHASLIDDEGIALARARGVWLDMDIYNGDFIAEVGKRDGWPADMLRKNDETTEAQ REGFRKAVKAGVRLSYGTDAGVFPHGLNARQFRYMVRYGMTPMQAIQSATTVAADLLGWSRDVGALSPGHYADMIAVAGD PLADVSVLENVAHVMKGGEVVR
Sequences:
>Translated_422_residues MLRYLLPLVALIPATASAETLYVRAGRLVDPEAGKVLTGQVLTVEDGRVVSVQGDGPLPQGAKVVDWSGFTVLPGLIDCH VHLADVEQSNNVAEPLLHSAMEIGFIGARNAKKTLLAGFTTVHDVGSFRAYADVELRNAINRGDVPGPRVSAVGAYVTIP GGGGEVTGFAPDVTVPADMRAGVVNDAADVTRKVNALFQNGADSIKLIATGAVLAQGTEPGQIELSGEMMKAAVDVARQR GSWVTAHAHGAAGIKLAIQSGVKAIEHASLIDDEGIALARARGVWLDMDIYNGDFIAEVGKRDGWPADMLRKNDETTEAQ REGFRKAVKAGVRLSYGTDAGVFPHGLNARQFRYMVRYGMTPMQAIQSATTVAADLLGWSRDVGALSPGHYADMIAVAGD PLADVSVLENVAHVMKGGEVVR >Mature_422_residues MLRYLLPLVALIPATASAETLYVRAGRLVDPEAGKVLTGQVLTVEDGRVVSVQGDGPLPQGAKVVDWSGFTVLPGLIDCH VHLADVEQSNNVAEPLLHSAMEIGFIGARNAKKTLLAGFTTVHDVGSFRAYADVELRNAINRGDVPGPRVSAVGAYVTIP GGGGEVTGFAPDVTVPADMRAGVVNDAADVTRKVNALFQNGADSIKLIATGAVLAQGTEPGQIELSGEMMKAAVDVARQR GSWVTAHAHGAAGIKLAIQSGVKAIEHASLIDDEGIALARARGVWLDMDIYNGDFIAEVGKRDGWPADMLRKNDETTEAQ REGFRKAVKAGVRLSYGTDAGVFPHGLNARQFRYMVRYGMTPMQAIQSATTVAADLLGWSRDVGALSPGHYADMIAVAGD PLADVSVLENVAHVMKGGEVVR
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322248, Length=322, Percent_Identity=28.8819875776398, Blast_Score=121, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44418; Mature: 44418
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRYLLPLVALIPATASAETLYVRAGRLVDPEAGKVLTGQVLTVEDGRVVSVQGDGPLPQ CHHHHHHHHHHHCCCCCCCEEEEECCCEECCCCCCEEECEEEEEECCEEEEEECCCCCCC GAKVVDWSGFTVLPGLIDCHVHLADVEQSNNVAEPLLHSAMEIGFIGARNAKKTLLAGFT CCEEEECCCCEECCCHHEEEEEEECCCCCCCHHHHHHHHHHHHCEEECCCCHHHHHHHHH TVHDVGSFRAYADVELRNAINRGDVPGPRVSAVGAYVTIPGGGGEVTGFAPDVTVPADMR HHHHCCCCCEEECHHHHHHCCCCCCCCCCEEECEEEEEECCCCCCCCCCCCCCCCCCCCC AGVVNDAADVTRKVNALFQNGADSIKLIATGAVLAQGTEPGQIELSGEMMKAAVDVARQR CCCCCCHHHHHHHHHHHHHCCCCCEEEEEECEEEECCCCCCEEEECHHHHHHHHHHHHHC GSWVTAHAHGAAGIKLAIQSGVKAIEHASLIDDEGIALARARGVWLDMDIYNGDFIAEVG CCEEEEECCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEECCCHHHECC KRDGWPADMLRKNDETTEAQREGFRKAVKAGVRLSYGTDAGVFPHGLNARQFRYMVRYGM CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHCC TPMQAIQSATTVAADLLGWSRDVGALSPGHYADMIAVAGDPLADVSVLENVAHVMKGGEV CHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHCCCCC VR CC >Mature Secondary Structure MLRYLLPLVALIPATASAETLYVRAGRLVDPEAGKVLTGQVLTVEDGRVVSVQGDGPLPQ CHHHHHHHHHHHCCCCCCCEEEEECCCEECCCCCCEEECEEEEEECCEEEEEECCCCCCC GAKVVDWSGFTVLPGLIDCHVHLADVEQSNNVAEPLLHSAMEIGFIGARNAKKTLLAGFT CCEEEECCCCEECCCHHEEEEEEECCCCCCCHHHHHHHHHHHHCEEECCCCHHHHHHHHH TVHDVGSFRAYADVELRNAINRGDVPGPRVSAVGAYVTIPGGGGEVTGFAPDVTVPADMR HHHHCCCCCEEECHHHHHHCCCCCCCCCCEEECEEEEEECCCCCCCCCCCCCCCCCCCCC AGVVNDAADVTRKVNALFQNGADSIKLIATGAVLAQGTEPGQIELSGEMMKAAVDVARQR CCCCCCHHHHHHHHHHHHHCCCCCEEEEEECEEEECCCCCCEEEECHHHHHHHHHHHHHC GSWVTAHAHGAAGIKLAIQSGVKAIEHASLIDDEGIALARARGVWLDMDIYNGDFIAEVG CCEEEEECCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEECCCHHHECC KRDGWPADMLRKNDETTEAQREGFRKAVKAGVRLSYGTDAGVFPHGLNARQFRYMVRYGM CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHCC TPMQAIQSATTVAADLLGWSRDVGALSPGHYADMIAVAGDPLADVSVLENVAHVMKGGEV CHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHCCCCC VR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA