| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200768
Identifier: 87200768
GI number: 87200768
Start: 2977208
End: 2977540
Strand: Reverse
Name: 87200768
Synonym: Saro_2755
Alternate gene names: NA
Gene position: 2977540-2977208 (Counterclockwise)
Preceding gene: 87200769
Following gene: 87200767
Centisome position: 83.6
GC content: 57.66
Gene sequence:
>333_bases GTGCTAAAGCACGGGTTGATGAGACTCGTTTTGGCCCTGCTTGCATTCGCACTGTCGGCACTGCCGATGGCGGCCAACGC GGAACTTTCGACGCAACACAGTCGATCGGCCGCAATGTCGTCGACCATGGATTACTGCGACATGTCGTCGGATCACGACA ACAGCAAGCGCACGTCCAACTGCTTCTCGACGGTTTGCATGGCCATTATCTTGCCGGAGCAGGAACGGGCGGCATCCTTT ATCGGCGAGCCGACTATCCTGGCTCCAATGTATGATCGCATTGATCTTGCCTTTGACGCAGGCATCGACCCGCCGCCACC GCGATTCCGTTGA
Upstream 100 bases:
>100_bases GGCTTGCTGCGTCAACTGTGAGCATAAACGAATATGCCCGACGACACCGCGACCCGGAAAACGTGCCAAGCTGGACTGTT TCTCGCCAAAGCAATGAATT
Downstream 100 bases:
>100_bases AACTCCCCATAACGAACAACAGATTAAACGGAGTTTTGACATGAAGATGTTTTTTGCGGCCCTCGCTCTCGCGACAGCGC TTCCAACGGTGACTTACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MLKHGLMRLVLALLAFALSALPMAANAELSTQHSRSAAMSSTMDYCDMSSDHDNSKRTSNCFSTVCMAIILPEQERAASF IGEPTILAPMYDRIDLAFDAGIDPPPPRFR
Sequences:
>Translated_110_residues MLKHGLMRLVLALLAFALSALPMAANAELSTQHSRSAAMSSTMDYCDMSSDHDNSKRTSNCFSTVCMAIILPEQERAASF IGEPTILAPMYDRIDLAFDAGIDPPPPRFR >Mature_110_residues MLKHGLMRLVLALLAFALSALPMAANAELSTQHSRSAAMSSTMDYCDMSSDHDNSKRTSNCFSTVCMAIILPEQERAASF IGEPTILAPMYDRIDLAFDAGIDPPPPRFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12036; Mature: 12036
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 7.3 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 7.3 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKHGLMRLVLALLAFALSALPMAANAELSTQHSRSAAMSSTMDYCDMSSDHDNSKRTSN CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH CFSTVCMAIILPEQERAASFIGEPTILAPMYDRIDLAFDAGIDPPPPRFR HHHHHHHHHHCCCHHHHHHHCCCCCEECHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MLKHGLMRLVLALLAFALSALPMAANAELSTQHSRSAAMSSTMDYCDMSSDHDNSKRTSN CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH CFSTVCMAIILPEQERAASFIGEPTILAPMYDRIDLAFDAGIDPPPPRFR HHHHHHHHHHCCCHHHHHHHCCCCCEECHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA