| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200767
Identifier: 87200767
GI number: 87200767
Start: 2976637
End: 2976915
Strand: Reverse
Name: 87200767
Synonym: Saro_2754
Alternate gene names: NA
Gene position: 2976915-2976637 (Counterclockwise)
Preceding gene: 87200768
Following gene: 87200766
Centisome position: 83.58
GC content: 55.91
Gene sequence:
>279_bases GTGCATCCTCGCGCCGCGAATTTTCGCGGCCGCAGCCGCCCTCCAGGACGCCAGCGCCTGACGGCTTCAAGCCACATCTA TAACCTGAGCATGCCCAAGGAGAGTCCAATGGGAAAACATCGTTTAGTGCCTGATGAAGAGTTGATCGGCCCCCTGAGGA ACGGGATTTCGATAGCGCTGAAGCTCGCAGACCGCTTGGGTCTGCACATGGTCGGCATACACCTCAACAACGCGTTGGAG TGTTTGAGCGAAGGTCAGAAAGATAAAGACAATGACTGA
Upstream 100 bases:
>100_bases GGAACAAAGGCAGGACCACGCCGGGCACGAGATGCCCCGCGCGCCCGCTCAGTAACATGGGGGGAAAGGGGAGCGGCACC GCCGCTCCCCTTTTTCATGG
Downstream 100 bases:
>100_bases CGCCTTGATCGCTGCACGCTCGTCAAGCAGTCACCCGCCGGCAAGAACCCATGCTTTCCTCTCGGATGGGGACGCCATCT CACGCTAGAAGTCTATGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MHPRAANFRGRSRPPGRQRLTASSHIYNLSMPKESPMGKHRLVPDEELIGPLRNGISIALKLADRLGLHMVGIHLNNALE CLSEGQKDKDND
Sequences:
>Translated_92_residues MHPRAANFRGRSRPPGRQRLTASSHIYNLSMPKESPMGKHRLVPDEELIGPLRNGISIALKLADRLGLHMVGIHLNNALE CLSEGQKDKDND >Mature_92_residues MHPRAANFRGRSRPPGRQRLTASSHIYNLSMPKESPMGKHRLVPDEELIGPLRNGISIALKLADRLGLHMVGIHLNNALE CLSEGQKDKDND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10246; Mature: 10246
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPRAANFRGRSRPPGRQRLTASSHIYNLSMPKESPMGKHRLVPDEELIGPLRNGISIAL CCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHH KLADRLGLHMVGIHLNNALECLSEGQKDKDND HHHHHCCEEEEEEEHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MHPRAANFRGRSRPPGRQRLTASSHIYNLSMPKESPMGKHRLVPDEELIGPLRNGISIAL CCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHH KLADRLGLHMVGIHLNNALECLSEGQKDKDND HHHHHCCEEEEEEEHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA