| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200753
Identifier: 87200753
GI number: 87200753
Start: 2965925
End: 2967073
Strand: Direct
Name: 87200753
Synonym: Saro_2740
Alternate gene names: NA
Gene position: 2965925-2967073 (Clockwise)
Preceding gene: 87200752
Following gene: 87200754
Centisome position: 83.28
GC content: 67.54
Gene sequence:
>1149_bases ATGACGACGACCGTCTCGATCCGCTTCAAGTTCCGGCGCGGGACCGCTTCCGAGTGGACGACCGCAAATCCGGTGTTGCT TGCCGGGGAGCCGGGTCTGGAAACCGACACCGGCAAGATGAAGTTTGGCGACGGTACAACTGCTTGGAACAGCCTGGCCT ATTTCGGCGGTACTCCGGTGATTGCCGATGGGTCTATCACGCTCGCCAAGTTGGCTGACGTTGCGACCGGGACCGTGTTC TATCGCAAGACCGCAGGCTCTGGCGCTCCCGAAGTCCAGACCCTTGCTACGCTGAAGACGGATCTCGGGCTTACTGGCAC CAACAGCGGCGATGCCCCGTGCATCATCGACATCTTCACCTCTAGCGGTACATGGACGAAGCGGGCCGGCCTCAAGGCGG CACGCACTGTGGTCATCGGCGCCGGCGGCGGTGGCGCCGCCGGCCGCAAAGGTGCGGCAGGTTCTGCCCGATCGGGCGGC GGCGGAGGGGGCGGCGGTGCGTTCTCTGAATCCATCATTCCGGCAACGCTGCTCGGTGCGACAGAAACGGTCACGGTTGG AACTGGCGGCGCCGGCGCTCCTGCGCAGTCTACAAACTCAACCGATGGAGCGGCGGGCACTGCGGGCGGGCTGTCGTCCT TCGGGGGGCATGTCTACGCGCGCGGGGGCAATGGCGGCAGCGCGGGTGCATCTGCCAACCTCGCGGCAGGATTTGCGGCG GGCGGCGTGTTCTCTGGCGGTACTGGCGGCCCGACCAGTGTGACTGCGACACCTTCGGCTGCGTCATCGGTCGGCACGTT TGCCGCAACTGGTGGCGGCGGTGGCGGTTCGATCAGCACCGGCAATTCCGCGCTCACTCCCGGCACTGGTGGTTCGCAAA CTGCGGGCGCAAGCCTCAACGGCGGCACTGCGGGCACTGCCGGTGGTAATGGCGGTGCGGGCAATGCGCCAGCGGCCGGA ACTCCCCGTGGCGGCTCTGGCGGTGGCGGCGGCGCGCCCAACCTGTCGGGCAACAGCGGCGCTGGCGGCAACGGCGGTCT CTATGGCGGCGGCGGCGGTGGCGGCGGTGCAGGCGTCGATTCCGTGGGCAACAGCGGCGCTGGCGGCAACGGCGCAGACG GCTTGGTCATAGTCTTCAACTACTTCTGA
Upstream 100 bases:
>100_bases TGGAAGTGGCCTATCAGGTCGGGGACGGGCGCGTGTCCGAGTGGTCGGCGCCGGTCACGGTCAGCACGGTCTCCGAAATC ATCTACGACGGTGGCACGGC
Downstream 100 bases:
>100_bases GATTGACGGCGGTAACGGGAACCAAGGTGAAGCCATAGCCAACGAGACGCCATGCGCGTCTTTCCAACCTATGCCTTCGC CTTCTCCGACATGGAGGCCG
Product: PE-PGRS family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MTTTVSIRFKFRRGTASEWTTANPVLLAGEPGLETDTGKMKFGDGTTAWNSLAYFGGTPVIADGSITLAKLADVATGTVF YRKTAGSGAPEVQTLATLKTDLGLTGTNSGDAPCIIDIFTSSGTWTKRAGLKAARTVVIGAGGGGAAGRKGAAGSARSGG GGGGGGAFSESIIPATLLGATETVTVGTGGAGAPAQSTNSTDGAAGTAGGLSSFGGHVYARGGNGGSAGASANLAAGFAA GGVFSGGTGGPTSVTATPSAASSVGTFAATGGGGGGSISTGNSALTPGTGGSQTAGASLNGGTAGTAGGNGGAGNAPAAG TPRGGSGGGGGAPNLSGNSGAGGNGGLYGGGGGGGGAGVDSVGNSGAGGNGADGLVIVFNYF
Sequences:
>Translated_382_residues MTTTVSIRFKFRRGTASEWTTANPVLLAGEPGLETDTGKMKFGDGTTAWNSLAYFGGTPVIADGSITLAKLADVATGTVF YRKTAGSGAPEVQTLATLKTDLGLTGTNSGDAPCIIDIFTSSGTWTKRAGLKAARTVVIGAGGGGAAGRKGAAGSARSGG GGGGGGAFSESIIPATLLGATETVTVGTGGAGAPAQSTNSTDGAAGTAGGLSSFGGHVYARGGNGGSAGASANLAAGFAA GGVFSGGTGGPTSVTATPSAASSVGTFAATGGGGGGSISTGNSALTPGTGGSQTAGASLNGGTAGTAGGNGGAGNAPAAG TPRGGSGGGGGAPNLSGNSGAGGNGGLYGGGGGGGGAGVDSVGNSGAGGNGADGLVIVFNYF >Mature_381_residues TTTVSIRFKFRRGTASEWTTANPVLLAGEPGLETDTGKMKFGDGTTAWNSLAYFGGTPVIADGSITLAKLADVATGTVFY RKTAGSGAPEVQTLATLKTDLGLTGTNSGDAPCIIDIFTSSGTWTKRAGLKAARTVVIGAGGGGAAGRKGAAGSARSGGG GGGGGAFSESIIPATLLGATETVTVGTGGAGAPAQSTNSTDGAAGTAGGLSSFGGHVYARGGNGGSAGASANLAAGFAAG GVFSGGTGGPTSVTATPSAASSVGTFAATGGGGGGSISTGNSALTPGTGGSQTAGASLNGGTAGTAGGNGGAGNAPAAGT PRGGSGGGGGAPNLSGNSGAGGNGGLYGGGGGGGGAGVDSVGNSGAGGNGADGLVIVFNYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34751; Mature: 34620
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTVSIRFKFRRGTASEWTTANPVLLAGEPGLETDTGKMKFGDGTTAWNSLAYFGGTPV CCEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCCHHHCCCEECCCCE IADGSITLAKLADVATGTVFYRKTAGSGAPEVQTLATLKTDLGLTGTNSGDAPCIIDIFT EECCCEEHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEE SSGTWTKRAGLKAARTVVIGAGGGGAAGRKGAAGSARSGGGGGGGGAFSESIIPATLLGA CCCCCHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEECC TETVTVGTGGAGAPAQSTNSTDGAAGTAGGLSSFGGHVYARGGNGGSAGASANLAAGFAA CEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCHHHHHC GGVFSGGTGGPTSVTATPSAASSVGTFAATGGGGGGSISTGNSALTPGTGGSQTAGASLN CCCCCCCCCCCCEEEECCCCHHCCCCEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCC GGTAGTAGGNGGAGNAPAAGTPRGGSGGGGGAPNLSGNSGAGGNGGLYGGGGGGGGAGVD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SVGNSGAGGNGADGLVIVFNYF CCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure TTTVSIRFKFRRGTASEWTTANPVLLAGEPGLETDTGKMKFGDGTTAWNSLAYFGGTPV CEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCCHHHCCCEECCCCE IADGSITLAKLADVATGTVFYRKTAGSGAPEVQTLATLKTDLGLTGTNSGDAPCIIDIFT EECCCEEHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEE SSGTWTKRAGLKAARTVVIGAGGGGAAGRKGAAGSARSGGGGGGGGAFSESIIPATLLGA CCCCCHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEECC TETVTVGTGGAGAPAQSTNSTDGAAGTAGGLSSFGGHVYARGGNGGSAGASANLAAGFAA CEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCHHHHHC GGVFSGGTGGPTSVTATPSAASSVGTFAATGGGGGGSISTGNSALTPGTGGSQTAGASLN CCCCCCCCCCCCEEEECCCCHHCCCCEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCC GGTAGTAGGNGGAGNAPAAGTPRGGSGGGGGAPNLSGNSGAGGNGGLYGGGGGGGGAGVD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SVGNSGAGGNGADGLVIVFNYF CCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA